RNA–Protein interactions for RNA: ENST00000242140.9

WIPF3-201, Transcript of WAS/WASL interacting protein family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene WIPF3, Length 4,184 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF3-201ENST00000242140 NISCHQ9Y2I1 1504 aa26.28■■□□□ 1.8
WIPF3-201ENST00000242140 SHROOM4Q9ULL8 1493 aa23.06■■□□□ 1.28
WIPF3-201ENST00000242140 SUPT5HO00267 1087 aaKnown RBP22.71■■□□□ 1.23
WIPF3-201ENST00000242140 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
WIPF3-201ENST00000242140 ZCCHC6Q5VYS8 1495 aaKnown RBP22.19■■□□□ 1.14
WIPF3-201ENST00000242140 CCDC180Q9P1Z9 1646 aa22■■□□□ 1.11
WIPF3-201ENST00000242140 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
WIPF3-201ENST00000242140 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
WIPF3-201ENST00000242140 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
WIPF3-201ENST00000242140 LOC105371045A0A1W2PR82 267 aa21.44■■□□□ 1.02
WIPF3-201ENST00000242140 HRCP23327 699 aa21.38■■□□□ 1.01
WIPF3-201ENST00000242140 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
WIPF3-201ENST00000242140 PPARGC1BQ86YN6 1023 aaKnown RBP21.19■□□□□ 0.98
WIPF3-201ENST00000242140 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
WIPF3-201ENST00000242140 SCRIBQ14160 1630 aa21.07■□□□□ 0.96
WIPF3-201ENST00000242140 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
WIPF3-201ENST00000242140 TRIM41Q8WV44 630 aa20.99■□□□□ 0.95
WIPF3-201ENST00000242140 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
WIPF3-201ENST00000242140 ABCC9O60706 1549 aa20.93■□□□□ 0.94
WIPF3-201ENST00000242140 TRIM26Q12899 539 aaPredicted RBP20.87■□□□□ 0.93
WIPF3-201ENST00000242140 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
WIPF3-201ENST00000242140 CECR2Q9BXF3 1484 aa20.68■□□□□ 0.9
WIPF3-201ENST00000242140 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
WIPF3-201ENST00000242140 NACADO15069 1562 aa20.46■□□□□ 0.87
WIPF3-201ENST00000242140 WIZO95785 1651 aa20.41■□□□□ 0.86
WIPF3-201ENST00000242140 TTBK1Q5TCY1 1321 aaPredicted RBP20.39■□□□□ 0.86
WIPF3-201ENST00000242140 ZEB1P37275 1124 aaPredicted RBP20.37■□□□□ 0.85
WIPF3-201ENST00000242140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
WIPF3-201ENST00000242140 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
WIPF3-201ENST00000242140 CCER1Q8TC90 406 aaPredicted RBP20.16■□□□□ 0.82
WIPF3-201ENST00000242140 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.82
WIPF3-201ENST00000242140 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
WIPF3-201ENST00000242140 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
WIPF3-201ENST00000242140 UBTFP17480 764 aaKnown RBP20.07■□□□□ 0.8
WIPF3-201ENST00000242140 SOGA1O94964 1423 aa20.01■□□□□ 0.79
WIPF3-201ENST00000242140 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
WIPF3-201ENST00000242140 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
WIPF3-201ENST00000242140 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
WIPF3-201ENST00000242140 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
WIPF3-201ENST00000242140 CEP162Q5TB80 1403 aa19.91■□□□□ 0.78
WIPF3-201ENST00000242140 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
WIPF3-201ENST00000242140 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
WIPF3-201ENST00000242140 RUSC2Q8N2Y8 1516 aa19.9■□□□□ 0.78
WIPF3-201ENST00000242140 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
WIPF3-201ENST00000242140 TNIKQ9UKE5 1360 aa19.78■□□□□ 0.76
WIPF3-201ENST00000242140 UNC13AQ9UPW8 1703 aa19.78■□□□□ 0.76
WIPF3-201ENST00000242140 DIEXFQ68CQ4 756 aaKnown RBP19.75■□□□□ 0.75
WIPF3-201ENST00000242140 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
WIPF3-201ENST00000242140 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
WIPF3-201ENST00000242140 EEA1Q15075 1411 aa19.65■□□□□ 0.74
WIPF3-201ENST00000242140 GOLGA3Q08378 1498 aa19.65■□□□□ 0.74
WIPF3-201ENST00000242140 NEUROD1Q13562 356 aa19.64■□□□□ 0.73
WIPF3-201ENST00000242140 APLP2Q06481 763 aa19.62■□□□□ 0.73
WIPF3-201ENST00000242140 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
WIPF3-201ENST00000242140 ACIN1Q9UKV3 1341 aaKnown RBP19.59■□□□□ 0.73
WIPF3-201ENST00000242140 CLIP1P30622 1438 aa19.54■□□□□ 0.72
WIPF3-201ENST00000242140 YTHDC1Q96MU7 727 aaKnown RBP19.54■□□□□ 0.72
WIPF3-201ENST00000242140 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
WIPF3-201ENST00000242140 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
WIPF3-201ENST00000242140 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
WIPF3-201ENST00000242140 ATAD2BQ9ULI0 1458 aa19.51■□□□□ 0.71
WIPF3-201ENST00000242140 ZNF316A6NFI3 1004 aaPredicted RBP19.5■□□□□ 0.71
WIPF3-201ENST00000242140 CENPBP07199 599 aaPredicted RBP19.49■□□□□ 0.71
WIPF3-201ENST00000242140 GTF3C3Q9Y5Q9 886 aa19.49■□□□□ 0.71
WIPF3-201ENST00000242140 RAPGEF2Q9Y4G8 1499 aa19.46■□□□□ 0.71
WIPF3-201ENST00000242140 PEG3Q9GZU2 1588 aa19.38■□□□□ 0.69
WIPF3-201ENST00000242140 VPS8Q8N3P4 1428 aa19.38■□□□□ 0.69
WIPF3-201ENST00000242140 PELP1Q8IZL8 1130 aaKnown RBP19.35■□□□□ 0.69
WIPF3-201ENST00000242140 MIER1Q8N108 512 aa19.33■□□□□ 0.69
WIPF3-201ENST00000242140 KIF21BO75037 1637 aa19.32■□□□□ 0.68
WIPF3-201ENST00000242140 ITGAEP38570 1179 aa19.28■□□□□ 0.68
WIPF3-201ENST00000242140 KANK4Q5T7N3 995 aaPredicted RBP19.26■□□□□ 0.67
WIPF3-201ENST00000242140 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
WIPF3-201ENST00000242140 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
WIPF3-201ENST00000242140 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
WIPF3-201ENST00000242140 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
WIPF3-201ENST00000242140 ATP1B4Q9UN42 357 aaPredicted RBP19.09■□□□□ 0.65
WIPF3-201ENST00000242140 CUX1P39880 1505 aa19.08■□□□□ 0.64
WIPF3-201ENST00000242140 DHX57Q6P158 1386 aaKnown RBP19.05■□□□□ 0.64
WIPF3-201ENST00000242140 P3H3Q8IVL6 736 aa19.04■□□□□ 0.64
WIPF3-201ENST00000242140 NCAPD3P42695 1498 aa19.02■□□□□ 0.64
WIPF3-201ENST00000242140 BIVM-ERCC5R4GMW8 1640 aa19.01■□□□□ 0.63
WIPF3-201ENST00000242140 ERICH3Q5RHP9 1530 aa18.99■□□□□ 0.63
WIPF3-201ENST00000242140 CUX2O14529 1486 aa18.96■□□□□ 0.63
WIPF3-201ENST00000242140 CCNB3Q8WWL7 1395 aa18.95■□□□□ 0.62
WIPF3-201ENST00000242140 CFTRP13569 1480 aa18.94■□□□□ 0.62
WIPF3-201ENST00000242140 FAM50AQ14320 339 aaKnown RBP18.94■□□□□ 0.62
WIPF3-201ENST00000242140 ARHGAP35Q9NRY4 1499 aa18.94■□□□□ 0.62
WIPF3-201ENST00000242140 HMGXB3Q12766 1538 aa18.92■□□□□ 0.62
WIPF3-201ENST00000242140 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
WIPF3-201ENST00000242140 IGF1RP08069 1367 aa18.9■□□□□ 0.62
WIPF3-201ENST00000242140 RRBP1Q9P2E9 1410 aaKnown RBP18.87■□□□□ 0.61
WIPF3-201ENST00000242140 CARMIL1Q5VZK9 1371 aa18.87■□□□□ 0.61
WIPF3-201ENST00000242140 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.61
WIPF3-201ENST00000242140 SIN3AQ96ST3 1273 aa18.82■□□□□ 0.6
WIPF3-201ENST00000242140 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
WIPF3-201ENST00000242140 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
WIPF3-201ENST00000242140 KCNH8Q96L42 1107 aa18.78■□□□□ 0.6
WIPF3-201ENST00000242140 HIRIP3Q9BW71 556 aaPredicted RBP18.78■□□□□ 0.6
WIPF3-201ENST00000242140 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms