RNA–Protein interactions for RNA: ENST00000239893.9

EXOSC8-201, Transcript of exosome component 8, humanhuman

TSL 5

Gene EXOSC8, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-201ENST00000239893 AEBP2Q6ZN18 517 aaPredicted RBP25.9■■□□□ 1.74
EXOSC8-201ENST00000239893 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
EXOSC8-201ENST00000239893 SENP3Q9H4L4 574 aaPredicted RBP22.21■■□□□ 1.15
EXOSC8-201ENST00000239893 PHF23Q9BUL5 403 aaPredicted RBP21.84■■□□□ 1.09
EXOSC8-201ENST00000239893 FOXD1Q16676 465 aa20.68■□□□□ 0.9
EXOSC8-201ENST00000239893 MSH5O43196 834 aa19.53■□□□□ 0.72
EXOSC8-201ENST00000239893 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
EXOSC8-201ENST00000239893 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
EXOSC8-201ENST00000239893 PIAS4Q8N2W9 510 aaPredicted RBP19.27■□□□□ 0.68
EXOSC8-201ENST00000239893 PPP6R1Q9UPN7 881 aa19.09■□□□□ 0.65
EXOSC8-201ENST00000239893 ADRA2BP18089 450 aa19.02■□□□□ 0.64
EXOSC8-201ENST00000239893 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
EXOSC8-201ENST00000239893 MAPK8IP2Q13387 824 aaPredicted RBP17.54■□□□□ 0.4
EXOSC8-201ENST00000239893 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
EXOSC8-201ENST00000239893 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
EXOSC8-201ENST00000239893 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
EXOSC8-201ENST00000239893 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
EXOSC8-201ENST00000239893 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
EXOSC8-201ENST00000239893 CNKSR2Q8WXI2 1034 aa16.68■□□□□ 0.26
EXOSC8-201ENST00000239893 RNF39Q9H2S5 420 aa16.61■□□□□ 0.25
EXOSC8-201ENST00000239893 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
EXOSC8-201ENST00000239893 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
EXOSC8-201ENST00000239893 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
EXOSC8-201ENST00000239893 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
EXOSC8-201ENST00000239893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.153e-7■■□□□ 14.4
EXOSC8-201ENST00000239893 NPM3O75607 178 aaKnown RBP15.92■□□□□ 0.14
EXOSC8-201ENST00000239893 U3KPZ7 1027 aaPredicted RBP15.61■□□□□ 0.09
EXOSC8-201ENST00000239893 CAPN15O75808 1086 aa15.47■□□□□ 0.07
EXOSC8-201ENST00000239893 DSG3P32926 999 aa15.45■□□□□ 0.06
EXOSC8-201ENST00000239893 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
EXOSC8-201ENST00000239893 KCNA4P22459 653 aa15.34■□□□□ 0.05
EXOSC8-201ENST00000239893 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
EXOSC8-201ENST00000239893 APLP2Q06481 763 aa15.24■□□□□ 0.03
EXOSC8-201ENST00000239893 POTEHQ6S545 545 aa15.24■□□□□ 0.03
EXOSC8-201ENST00000239893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
EXOSC8-201ENST00000239893 HNRNPUL2Q1KMD3 747 aaKnown RBP15.15■□□□□ 0.02
EXOSC8-201ENST00000239893 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
EXOSC8-201ENST00000239893 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
EXOSC8-201ENST00000239893 ABCB7O75027 752 aa15.05■□□□□ -0
EXOSC8-201ENST00000239893 SAMD1Q6SPF0 538 aaPredicted RBP15.02■□□□□ -0
EXOSC8-201ENST00000239893 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
EXOSC8-201ENST00000239893 MYCNP04198 464 aaPredicted RBP14.77□□□□□ -0.05
EXOSC8-201ENST00000239893 POLA2Q14181 598 aa14.67□□□□□ -0.06
EXOSC8-201ENST00000239893 CHRDL2Q6WN34 429 aa14.55□□□□□ -0.08
EXOSC8-201ENST00000239893 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
EXOSC8-201ENST00000239893 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
EXOSC8-201ENST00000239893 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
EXOSC8-201ENST00000239893 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
EXOSC8-201ENST00000239893 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
EXOSC8-201ENST00000239893 REM2Q8IYK8 340 aaPredicted RBP14.22□□□□□ -0.13
EXOSC8-201ENST00000239893 OSCARQ8IYS5 282 aa14.21□□□□□ -0.13
EXOSC8-201ENST00000239893 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
EXOSC8-201ENST00000239893 PIP4P2Q8N4L2 257 aa14.13□□□□□ -0.15
EXOSC8-201ENST00000239893 ZBTB22O15209 634 aa14.07□□□□□ -0.16
EXOSC8-201ENST00000239893 ATXN8OSP0DMR3 200 aa14.07□□□□□ -0.16
EXOSC8-201ENST00000239893 PITPNM1O00562 1244 aa14.06□□□□□ -0.16
EXOSC8-201ENST00000239893 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
EXOSC8-201ENST00000239893 HAX1O00165 279 aa13.96□□□□□ -0.17
EXOSC8-201ENST00000239893 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
EXOSC8-201ENST00000239893 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
EXOSC8-201ENST00000239893 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
EXOSC8-201ENST00000239893 FBLN2P98095 1184 aa13.92□□□□□ -0.18
EXOSC8-201ENST00000239893 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
EXOSC8-201ENST00000239893 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
EXOSC8-201ENST00000239893 EVX2Q03828 476 aa13.71□□□□□ -0.21
EXOSC8-201ENST00000239893 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
EXOSC8-201ENST00000239893 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
EXOSC8-201ENST00000239893 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
EXOSC8-201ENST00000239893 SSUH2Q9Y2M2 353 aa13.69□□□□□ -0.22
EXOSC8-201ENST00000239893 C19orf67A6NJJ6 358 aa13.57□□□□□ -0.24
EXOSC8-201ENST00000239893 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
EXOSC8-201ENST00000239893 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
EXOSC8-201ENST00000239893 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
EXOSC8-201ENST00000239893 GABBR2O75899 941 aa13.44□□□□□ -0.26
EXOSC8-201ENST00000239893 LHX8Q68G74 356 aa13.26□□□□□ -0.29
EXOSC8-201ENST00000239893 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
EXOSC8-201ENST00000239893 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
EXOSC8-201ENST00000239893 CLCN6P51797 869 aa13.22□□□□□ -0.29
EXOSC8-201ENST00000239893 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
EXOSC8-201ENST00000239893 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
EXOSC8-201ENST00000239893 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
EXOSC8-201ENST00000239893 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
EXOSC8-201ENST00000239893 CREBZFQ9NS37 354 aa13.04□□□□□ -0.32
EXOSC8-201ENST00000239893 DCBLD2Q96PD2 775 aa13.03□□□□□ -0.32
EXOSC8-201ENST00000239893 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
EXOSC8-201ENST00000239893 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
EXOSC8-201ENST00000239893 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
EXOSC8-201ENST00000239893 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
EXOSC8-201ENST00000239893 NPM1P06748 294 aaKnown RBP eCLIP12.84□□□□□ -0.35
EXOSC8-201ENST00000239893 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
EXOSC8-201ENST00000239893 PHF12Q96QT6 1004 aa12.79□□□□□ -0.36
EXOSC8-201ENST00000239893 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
EXOSC8-201ENST00000239893 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
EXOSC8-201ENST00000239893 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
EXOSC8-201ENST00000239893 PELP1Q8IZL8 1130 aaKnown RBP12.63□□□□□ -0.39
EXOSC8-201ENST00000239893 MS4A3Q96HJ5 214 aa12.63□□□□□ -0.39
EXOSC8-201ENST00000239893 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
EXOSC8-201ENST00000239893 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
EXOSC8-201ENST00000239893 PROM2Q8N271 834 aa12.61□□□□□ -0.39
EXOSC8-201ENST00000239893 SLC39A7Q92504 469 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms