RNA–Protein interactions for RNA: ENST00000237353.14

PMFBP1-201, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PMFBP1, Length 3,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-201ENST00000237353 NISCHQ9Y2I1 1504 aa14.71□□□□□ -0.05
PMFBP1-201ENST00000237353 CCDC180Q9P1Z9 1646 aa12.71□□□□□ -0.37
PMFBP1-201ENST00000237353 ZCCHC6Q5VYS8 1495 aaKnown RBP12.45□□□□□ -0.42
PMFBP1-201ENST00000237353 DCAF1Q9Y4B6 1507 aa12.25□□□□□ -0.45
PMFBP1-201ENST00000237353 SHROOM4Q9ULL8 1493 aa12.15□□□□□ -0.46
PMFBP1-201ENST00000237353 MYO15BQ96JP2 1530 aa11.98□□□□□ -0.49
PMFBP1-201ENST00000237353 SUPT5HO00267 1087 aaKnown RBP11.92□□□□□ -0.5
PMFBP1-201ENST00000237353 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
PMFBP1-201ENST00000237353 ABCC9O60706 1549 aa11.85□□□□□ -0.51
PMFBP1-201ENST00000237353 NACADO15069 1562 aa11.74□□□□□ -0.53
PMFBP1-201ENST00000237353 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
PMFBP1-201ENST00000237353 CHIC1Q5VXU3 224 aa11.66□□□□□ -0.54
PMFBP1-201ENST00000237353 SCRIBQ14160 1630 aa11.63□□□□□ -0.55
PMFBP1-201ENST00000237353 DNAJC5BQ9UF47 199 aa11.57□□□□□ -0.56
PMFBP1-201ENST00000237353 MYT1Q01538 1121 aa11.57□□□□□ -0.56
PMFBP1-201ENST00000237353 PRKCSHP14314 528 aaPredicted RBP11.55□□□□□ -0.56
PMFBP1-201ENST00000237353 RB1CC1Q8TDY2 1594 aa11.54□□□□□ -0.56
PMFBP1-201ENST00000237353 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
PMFBP1-201ENST00000237353 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
PMFBP1-201ENST00000237353 BAZ1AQ9NRL2 1556 aaPredicted RBP11.37□□□□□ -0.59
PMFBP1-201ENST00000237353 MROH2BQ7Z745 1585 aa11.33□□□□□ -0.6
PMFBP1-201ENST00000237353 CECR2Q9BXF3 1484 aa11.31□□□□□ -0.6
PMFBP1-201ENST00000237353 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
PMFBP1-201ENST00000237353 WIZO95785 1651 aa11.25□□□□□ -0.61
PMFBP1-201ENST00000237353 UNC13AQ9UPW8 1703 aa11.23□□□□□ -0.61
PMFBP1-201ENST00000237353 TOP2AP11388 1531 aaKnown RBP11.23□□□□□ -0.61
PMFBP1-201ENST00000237353 SMARCA4P51532 1647 aa11.22□□□□□ -0.61
PMFBP1-201ENST00000237353 HRCP23327 699 aa11.19□□□□□ -0.62
PMFBP1-201ENST00000237353 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
PMFBP1-201ENST00000237353 EIF4G1Q04637 1599 aaKnown RBP11.16□□□□□ -0.62
PMFBP1-201ENST00000237353 TTBK1Q5TCY1 1321 aaPredicted RBP11.15□□□□□ -0.62
PMFBP1-201ENST00000237353 LOC105371045A0A1W2PR82 267 aa11.14□□□□□ -0.63
PMFBP1-201ENST00000237353 TRIM26Q12899 539 aaPredicted RBP11.11□□□□□ -0.63
PMFBP1-201ENST00000237353 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
PMFBP1-201ENST00000237353 PCGF6Q9BYE7 350 aa11.11□□□□□ -0.63
PMFBP1-201ENST00000237353 EHMT2Q96KQ7 1210 aa11.09□□□□□ -0.63
PMFBP1-201ENST00000237353 SMARCA2P51531 1590 aa11.09□□□□□ -0.63
PMFBP1-201ENST00000237353 BICRAQ9NZM4 1560 aa11.09□□□□□ -0.63
PMFBP1-201ENST00000237353 CCDC88BA6NC98 1476 aa11.07□□□□□ -0.64
PMFBP1-201ENST00000237353 EEA1Q15075 1411 aa11.04□□□□□ -0.64
PMFBP1-201ENST00000237353 APLP2Q06481 763 aa11.03□□□□□ -0.64
PMFBP1-201ENST00000237353 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
PMFBP1-201ENST00000237353 ZEB1P37275 1124 aaPredicted RBP10.99□□□□□ -0.65
PMFBP1-201ENST00000237353 BCL11AQ9H165 835 aa10.98□□□□□ -0.65
PMFBP1-201ENST00000237353 FAM9AQ8IZU1 332 aaPredicted RBP10.96□□□□□ -0.65
PMFBP1-201ENST00000237353 PABPN1Q86U42 306 aaKnown RBP eCLIP10.96□□□□□ -0.66
PMFBP1-201ENST00000237353 ATAD2BQ9ULI0 1458 aa10.93□□□□□ -0.66
PMFBP1-201ENST00000237353 BAZ1BQ9UIG0 1483 aaKnown RBP10.91□□□□□ -0.66
PMFBP1-201ENST00000237353 ABCC8Q09428 1581 aa10.91□□□□□ -0.66
PMFBP1-201ENST00000237353 WRNQ14191 1432 aaPredicted RBP eCLIP10.88□□□□□ -0.67
PMFBP1-201ENST00000237353 TNIKQ9UKE5 1360 aa10.88□□□□□ -0.67
PMFBP1-201ENST00000237353 HMGXB3Q12766 1538 aa10.85□□□□□ -0.67
PMFBP1-201ENST00000237353 GOLGA3Q08378 1498 aa10.84□□□□□ -0.67
PMFBP1-201ENST00000237353 CSRNP3Q8WYN3 585 aa10.83□□□□□ -0.68
PMFBP1-201ENST00000237353 KIF21BO75037 1637 aa10.81□□□□□ -0.68
PMFBP1-201ENST00000237353 NCAPD3P42695 1498 aa10.8□□□□□ -0.68
PMFBP1-201ENST00000237353 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
PMFBP1-201ENST00000237353 CEP162Q5TB80 1403 aa10.8□□□□□ -0.68
PMFBP1-201ENST00000237353 SOGA1O94964 1423 aa10.79□□□□□ -0.68
PMFBP1-201ENST00000237353 SYNJ1O43426 1573 aa10.77□□□□□ -0.69
PMFBP1-201ENST00000237353 TOP2BQ02880 1626 aa10.75□□□□□ -0.69
PMFBP1-201ENST00000237353 BIVM-ERCC5R4GMW8 1640 aa10.75□□□□□ -0.69
PMFBP1-201ENST00000237353 DAXXQ9UER7 740 aaPredicted RBP10.71□□□□□ -0.69
PMFBP1-201ENST00000237353 UBTFP17480 764 aaKnown RBP10.71□□□□□ -0.7
PMFBP1-201ENST00000237353 PPARGC1BQ86YN6 1023 aaKnown RBP10.7□□□□□ -0.7
PMFBP1-201ENST00000237353 RUSC2Q8N2Y8 1516 aa10.69□□□□□ -0.7
PMFBP1-201ENST00000237353 SCAF1Q9H7N4 1312 aaKnown RBP10.69□□□□□ -0.7
PMFBP1-201ENST00000237353 ERICH3Q5RHP9 1530 aa10.68□□□□□ -0.7
PMFBP1-201ENST00000237353 CC2D2AQ9P2K1 1620 aa10.68□□□□□ -0.7
PMFBP1-201ENST00000237353 PRDM2Q13029 1718 aa10.67□□□□□ -0.7
PMFBP1-201ENST00000237353 CFTRP13569 1480 aa10.66□□□□□ -0.7
PMFBP1-201ENST00000237353 CLIP1P30622 1438 aa10.64□□□□□ -0.71
PMFBP1-201ENST00000237353 VPS8Q8N3P4 1428 aa10.63□□□□□ -0.71
PMFBP1-201ENST00000237353 PLEKHG5O94827 1062 aa10.62□□□□□ -0.71
PMFBP1-201ENST00000237353 KIF27Q86VH2 1401 aa10.6□□□□□ -0.71
PMFBP1-201ENST00000237353 PRXQ9BXM0 1461 aa10.6□□□□□ -0.71
PMFBP1-201ENST00000237353 EIF5BO60841 1220 aaKnown RBP10.59□□□□□ -0.71
PMFBP1-201ENST00000237353 CUX1P39880 1505 aa10.58□□□□□ -0.72
PMFBP1-201ENST00000237353 CCER1Q8TC90 406 aaPredicted RBP10.58□□□□□ -0.72
PMFBP1-201ENST00000237353 RAPGEF2Q9Y4G8 1499 aa10.58□□□□□ -0.72
PMFBP1-201ENST00000237353 CUX2O14529 1486 aa10.56□□□□□ -0.72
PMFBP1-201ENST00000237353 CADPSQ9ULU8 1353 aa10.54□□□□□ -0.72
PMFBP1-201ENST00000237353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.49□□□□□ -0.73
PMFBP1-201ENST00000237353 RANGAP1P46060 587 aaPredicted RBP10.47□□□□□ -0.73
PMFBP1-201ENST00000237353 ARAP1Q96P48 1450 aa10.46□□□□□ -0.74
PMFBP1-201ENST00000237353 MAP3K1Q13233 1512 aa10.44□□□□□ -0.74
PMFBP1-201ENST00000237353 CLSPNQ9HAW4 1339 aa10.43□□□□□ -0.74
PMFBP1-201ENST00000237353 DNMBPQ6XZF7 1577 aa10.43□□□□□ -0.74
PMFBP1-201ENST00000237353 FGD5Q6ZNL6 1462 aa10.42□□□□□ -0.74
PMFBP1-201ENST00000237353 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
PMFBP1-201ENST00000237353 IGF1RP08069 1367 aa10.4□□□□□ -0.74
PMFBP1-201ENST00000237353 LAMC3Q9Y6N6 1575 aa10.39□□□□□ -0.75
PMFBP1-201ENST00000237353 CARMIL1Q5VZK9 1371 aa10.39□□□□□ -0.75
PMFBP1-201ENST00000237353 ARHGAP35Q9NRY4 1499 aa10.38□□□□□ -0.75
PMFBP1-201ENST00000237353 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
PMFBP1-201ENST00000237353 RRBP1Q9P2E9 1410 aaKnown RBP10.38□□□□□ -0.75
PMFBP1-201ENST00000237353 CUL7Q14999 1698 aa10.37□□□□□ -0.75
PMFBP1-201ENST00000237353 FHAD1B1AJZ9 1412 aa10.37□□□□□ -0.75
PMFBP1-201ENST00000237353 ERCC6Q03468 1493 aa10.36□□□□□ -0.75
PMFBP1-201ENST00000237353 EFCAB5A4FU69 1503 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms