RNA–Protein interactions for RNA: ENST00000235790.8

KDM5B-201, Transcript of lysine demethylase 5B, humanhuman

TSL 2

Gene KDM5B, Length 4,418 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-201ENST00000235790 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
KDM5B-201ENST00000235790 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
KDM5B-201ENST00000235790 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
KDM5B-201ENST00000235790 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.49
KDM5B-201ENST00000235790 EHMT2Q96KQ7 1210 aa22.89■■□□□ 1.26
KDM5B-201ENST00000235790 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
KDM5B-201ENST00000235790 PCGF6Q9BYE7 350 aa22.68■■□□□ 1.22
KDM5B-201ENST00000235790 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
KDM5B-201ENST00000235790 ZCCHC6Q5VYS8 1495 aaKnown RBP22.56■■□□□ 1.2
KDM5B-201ENST00000235790 TRIM41Q8WV44 630 aa22.54■■□□□ 1.2
KDM5B-201ENST00000235790 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
KDM5B-201ENST00000235790 LOC105371045A0A1W2PR82 267 aa22.35■■□□□ 1.17
KDM5B-201ENST00000235790 ABCC9O60706 1549 aa22.24■■□□□ 1.15
KDM5B-201ENST00000235790 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
KDM5B-201ENST00000235790 HRCP23327 699 aa22.01■■□□□ 1.11
KDM5B-201ENST00000235790 TRIM26Q12899 539 aaPredicted RBP21.95■■□□□ 1.1
KDM5B-201ENST00000235790 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
KDM5B-201ENST00000235790 UBTFP17480 764 aaKnown RBP21.86■■□□□ 1.09
KDM5B-201ENST00000235790 SCRIBQ14160 1630 aa21.85■■□□□ 1.09
KDM5B-201ENST00000235790 APLP2Q06481 763 aa21.84■■□□□ 1.09
KDM5B-201ENST00000235790 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
KDM5B-201ENST00000235790 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
KDM5B-201ENST00000235790 PABPN1Q86U42 306 aaKnown RBP eCLIP21.74■■□□□ 1.07
KDM5B-201ENST00000235790 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
KDM5B-201ENST00000235790 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
KDM5B-201ENST00000235790 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
KDM5B-201ENST00000235790 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
KDM5B-201ENST00000235790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.3■■□□□ 1
KDM5B-201ENST00000235790 NACADO15069 1562 aa21.28■■□□□ 1
KDM5B-201ENST00000235790 ATP1B4Q9UN42 357 aaPredicted RBP21.25■□□□□ 0.99
KDM5B-201ENST00000235790 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
KDM5B-201ENST00000235790 HNRNPUL2Q1KMD3 747 aaKnown RBP21.2■□□□□ 0.98
KDM5B-201ENST00000235790 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
KDM5B-201ENST00000235790 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
KDM5B-201ENST00000235790 PELP1Q8IZL8 1130 aaKnown RBP21.14■□□□□ 0.97
KDM5B-201ENST00000235790 CENPBP07199 599 aaPredicted RBP21.07■□□□□ 0.96
KDM5B-201ENST00000235790 ITGAEP38570 1179 aa21■□□□□ 0.95
KDM5B-201ENST00000235790 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
KDM5B-201ENST00000235790 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
KDM5B-201ENST00000235790 BAZ1AQ9NRL2 1556 aaPredicted RBP20.91■□□□□ 0.94
KDM5B-201ENST00000235790 DIEXFQ68CQ4 756 aaKnown RBP20.84■□□□□ 0.93
KDM5B-201ENST00000235790 WIZO95785 1651 aa20.75■□□□□ 0.91
KDM5B-201ENST00000235790 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
KDM5B-201ENST00000235790 CEP162Q5TB80 1403 aa20.67■□□□□ 0.9
KDM5B-201ENST00000235790 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
KDM5B-201ENST00000235790 EEA1Q15075 1411 aa20.62■□□□□ 0.89
KDM5B-201ENST00000235790 SOGA1O94964 1423 aa20.62■□□□□ 0.89
KDM5B-201ENST00000235790 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
KDM5B-201ENST00000235790 MYT1Q01538 1121 aa20.6■□□□□ 0.89
KDM5B-201ENST00000235790 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
KDM5B-201ENST00000235790 FAM50AQ14320 339 aaKnown RBP20.59■□□□□ 0.89
KDM5B-201ENST00000235790 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
KDM5B-201ENST00000235790 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
KDM5B-201ENST00000235790 ZNF316A6NFI3 1004 aaPredicted RBP20.55■□□□□ 0.88
KDM5B-201ENST00000235790 CLIP1P30622 1438 aa20.55■□□□□ 0.88
KDM5B-201ENST00000235790 GOLGA3Q08378 1498 aa20.55■□□□□ 0.88
KDM5B-201ENST00000235790 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
KDM5B-201ENST00000235790 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
KDM5B-201ENST00000235790 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
KDM5B-201ENST00000235790 NEUROD1Q13562 356 aa20.4■□□□□ 0.86
KDM5B-201ENST00000235790 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
KDM5B-201ENST00000235790 ACIN1Q9UKV3 1341 aaKnown RBP20.32■□□□□ 0.84
KDM5B-201ENST00000235790 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.84
KDM5B-201ENST00000235790 KIF27Q86VH2 1401 aa20.25■□□□□ 0.83
KDM5B-201ENST00000235790 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
KDM5B-201ENST00000235790 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
KDM5B-201ENST00000235790 NEFLP07196 543 aa20.22■□□□□ 0.83
KDM5B-201ENST00000235790 ARID3CA6NKF2 412 aa20.21■□□□□ 0.83
KDM5B-201ENST00000235790 TRIM52Q96A61 297 aa20.2■□□□□ 0.82
KDM5B-201ENST00000235790 VPS8Q8N3P4 1428 aa20.12■□□□□ 0.81
KDM5B-201ENST00000235790 FBLN2P98095 1184 aa20.11■□□□□ 0.81
KDM5B-201ENST00000235790 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
KDM5B-201ENST00000235790 POLR3GLQ9BT43 218 aa20.1■□□□□ 0.81
KDM5B-201ENST00000235790 MIER1Q8N108 512 aa20.08■□□□□ 0.81
KDM5B-201ENST00000235790 CNGB1Q14028 1251 aaPredicted RBP20.06■□□□□ 0.8
KDM5B-201ENST00000235790 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
KDM5B-201ENST00000235790 CUX2O14529 1486 aa20.03■□□□□ 0.8
KDM5B-201ENST00000235790 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
KDM5B-201ENST00000235790 CARMIL1Q5VZK9 1371 aa19.99■□□□□ 0.79
KDM5B-201ENST00000235790 MTUS2Q5JR59 1369 aa19.96■□□□□ 0.79
KDM5B-201ENST00000235790 ANP32CO43423 234 aa19.95■□□□□ 0.78
KDM5B-201ENST00000235790 CHIC2Q9UKJ5 165 aa19.92■□□□□ 0.78
KDM5B-201ENST00000235790 DDX10Q13206 875 aaKnown RBP19.92■□□□□ 0.78
KDM5B-201ENST00000235790 CCNB3Q8WWL7 1395 aa19.89■□□□□ 0.78
KDM5B-201ENST00000235790 TONSLQ96HA7 1378 aa19.88■□□□□ 0.77
KDM5B-201ENST00000235790 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
KDM5B-201ENST00000235790 ZNF777Q9ULD5 760 aaPredicted RBP19.86■□□□□ 0.77
KDM5B-201ENST00000235790 ZNF326Q5BKZ1 582 aaKnown RBP19.86■□□□□ 0.77
KDM5B-201ENST00000235790 BCANQ96GW7 911 aa19.85■□□□□ 0.77
KDM5B-201ENST00000235790 HIRIP3Q9BW71 556 aaPredicted RBP19.85■□□□□ 0.77
KDM5B-201ENST00000235790 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
KDM5B-201ENST00000235790 CDK11AQ9UQ88 783 aaPredicted RBP19.84■□□□□ 0.77
KDM5B-201ENST00000235790 CLSPNQ9HAW4 1339 aa19.82■□□□□ 0.76
KDM5B-201ENST00000235790 SYNJ1O43426 1573 aa19.81■□□□□ 0.76
KDM5B-201ENST00000235790 BICRAQ9NZM4 1560 aa19.8■□□□□ 0.76
KDM5B-201ENST00000235790 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
KDM5B-201ENST00000235790 RRP7BPQ9NSQ0 103 aa19.78■□□□□ 0.76
KDM5B-201ENST00000235790 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
KDM5B-201ENST00000235790 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
KDM5B-201ENST00000235790 ERICH6Q7L0X2 663 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms