RNA–Protein interactions for RNA: ENST00000234310.7

PPP3R1-201, Transcript of protein phosphatase 3 regulatory subunit B, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP3R1, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3R1-201ENST00000234310 NISCHQ9Y2I1 1504 aa29.91■■■□□ 2.38
PPP3R1-201ENST00000234310 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
PPP3R1-201ENST00000234310 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
PPP3R1-201ENST00000234310 ZCCHC6Q5VYS8 1495 aaKnown RBP25.24■■□□□ 1.63
PPP3R1-201ENST00000234310 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
PPP3R1-201ENST00000234310 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
PPP3R1-201ENST00000234310 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.49
PPP3R1-201ENST00000234310 ABCC9O60706 1549 aa24.04■■□□□ 1.44
PPP3R1-201ENST00000234310 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
PPP3R1-201ENST00000234310 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
PPP3R1-201ENST00000234310 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.42
PPP3R1-201ENST00000234310 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
PPP3R1-201ENST00000234310 NACADO15069 1562 aa23.59■■□□□ 1.37
PPP3R1-201ENST00000234310 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
PPP3R1-201ENST00000234310 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
PPP3R1-201ENST00000234310 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
PPP3R1-201ENST00000234310 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
PPP3R1-201ENST00000234310 WIZO95785 1651 aa23.22■■□□□ 1.31
PPP3R1-201ENST00000234310 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
PPP3R1-201ENST00000234310 UNC13AQ9UPW8 1703 aa23.09■■□□□ 1.29
PPP3R1-201ENST00000234310 FAM9AQ8IZU1 332 aaPredicted RBP23.08■■□□□ 1.28
PPP3R1-201ENST00000234310 PCGF6Q9BYE7 350 aa23.05■■□□□ 1.28
PPP3R1-201ENST00000234310 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
PPP3R1-201ENST00000234310 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.273e-6■■■■□ 23.3
PPP3R1-201ENST00000234310 BAZ1AQ9NRL2 1556 aaPredicted RBP22.94■■□□□ 1.26
PPP3R1-201ENST00000234310 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
PPP3R1-201ENST00000234310 BICRAQ9NZM4 1560 aa22.79■■□□□ 1.24
PPP3R1-201ENST00000234310 HRCP23327 699 aa22.75■■□□□ 1.23
PPP3R1-201ENST00000234310 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
PPP3R1-201ENST00000234310 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
PPP3R1-201ENST00000234310 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
PPP3R1-201ENST00000234310 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
PPP3R1-201ENST00000234310 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
PPP3R1-201ENST00000234310 PPARGC1BQ86YN6 1023 aaKnown RBP22.57■■□□□ 1.2
PPP3R1-201ENST00000234310 TRIM26Q12899 539 aaPredicted RBP22.51■■□□□ 1.19
PPP3R1-201ENST00000234310 SOGA1O94964 1423 aa22.36■■□□□ 1.17
PPP3R1-201ENST00000234310 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.16
PPP3R1-201ENST00000234310 PEG3Q9GZU2 1588 aa22.32■■□□□ 1.16
PPP3R1-201ENST00000234310 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
PPP3R1-201ENST00000234310 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
PPP3R1-201ENST00000234310 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
PPP3R1-201ENST00000234310 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
PPP3R1-201ENST00000234310 SYNJ1O43426 1573 aa22.14■■□□□ 1.13
PPP3R1-201ENST00000234310 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
PPP3R1-201ENST00000234310 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
PPP3R1-201ENST00000234310 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
PPP3R1-201ENST00000234310 TNIKQ9UKE5 1360 aa21.96■■□□□ 1.11
PPP3R1-201ENST00000234310 EEA1Q15075 1411 aa21.93■■□□□ 1.1
PPP3R1-201ENST00000234310 GOLGA3Q08378 1498 aa21.89■■□□□ 1.1
PPP3R1-201ENST00000234310 RANGAP1P46060 587 aaPredicted RBP21.89■■□□□ 1.1
PPP3R1-201ENST00000234310 NCAPD3P42695 1498 aa21.87■■□□□ 1.09
PPP3R1-201ENST00000234310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.86■■□□□ 1.09
PPP3R1-201ENST00000234310 HMGXB3Q12766 1538 aa21.82■■□□□ 1.08
PPP3R1-201ENST00000234310 RAPGEF2Q9Y4G8 1499 aa21.8■■□□□ 1.08
PPP3R1-201ENST00000234310 TOP2BQ02880 1626 aa21.79■■□□□ 1.08
PPP3R1-201ENST00000234310 CEP164Q9UPV0 1460 aa21.78■■□□□ 1.08
PPP3R1-201ENST00000234310 ZEB1P37275 1124 aaPredicted RBP21.74■■□□□ 1.07
PPP3R1-201ENST00000234310 KIF21BO75037 1637 aa21.74■■□□□ 1.07
PPP3R1-201ENST00000234310 CUX1P39880 1505 aa21.72■■□□□ 1.07
PPP3R1-201ENST00000234310 BIVM-ERCC5R4GMW8 1640 aa21.7■■□□□ 1.06
PPP3R1-201ENST00000234310 CLIP1P30622 1438 aa21.69■■□□□ 1.06
PPP3R1-201ENST00000234310 CCER1Q8TC90 406 aaPredicted RBP21.67■■□□□ 1.06
PPP3R1-201ENST00000234310 CFTRP13569 1480 aa21.65■■□□□ 1.06
PPP3R1-201ENST00000234310 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
PPP3R1-201ENST00000234310 VPS8Q8N3P4 1428 aa21.52■■□□□ 1.04
PPP3R1-201ENST00000234310 PRXQ9BXM0 1461 aa21.51■■□□□ 1.03
PPP3R1-201ENST00000234310 HNRNPUL2Q1KMD3 747 aaKnown RBP21.5■■□□□ 1.03
PPP3R1-201ENST00000234310 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
PPP3R1-201ENST00000234310 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
PPP3R1-201ENST00000234310 PRDM2Q13029 1718 aa21.42■■□□□ 1.02
PPP3R1-201ENST00000234310 ERICH3Q5RHP9 1530 aa21.41■■□□□ 1.02
PPP3R1-201ENST00000234310 ARAP1Q96P48 1450 aa21.4■■□□□ 1.02
PPP3R1-201ENST00000234310 CUX2O14529 1486 aa21.4■■□□□ 1.02
PPP3R1-201ENST00000234310 APLP2Q06481 763 aa21.39■■□□□ 1.02
PPP3R1-201ENST00000234310 NESP48681 1621 aa21.38■■□□□ 1.01
PPP3R1-201ENST00000234310 FGD5Q6ZNL6 1462 aa21.36■■□□□ 1.01
PPP3R1-201ENST00000234310 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
PPP3R1-201ENST00000234310 KANK4Q5T7N3 995 aaPredicted RBP21.34■■□□□ 1.01
PPP3R1-201ENST00000234310 IGF1RP08069 1367 aa21.31■■□□□ 1
PPP3R1-201ENST00000234310 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
PPP3R1-201ENST00000234310 ARHGAP35Q9NRY4 1499 aa21.26■□□□□ 0.99
PPP3R1-201ENST00000234310 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
PPP3R1-201ENST00000234310 CARMIL1Q5VZK9 1371 aa21.21■□□□□ 0.99
PPP3R1-201ENST00000234310 P3H3Q8IVL6 736 aa21.17■□□□□ 0.98
PPP3R1-201ENST00000234310 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
PPP3R1-201ENST00000234310 POLA1P09884 1462 aaPredicted RBP21.14■□□□□ 0.97
PPP3R1-201ENST00000234310 DNMBPQ6XZF7 1577 aa21.11■□□□□ 0.97
PPP3R1-201ENST00000234310 ITGAEP38570 1179 aa21.08■□□□□ 0.96
PPP3R1-201ENST00000234310 DIEXFQ68CQ4 756 aaKnown RBP21.07■□□□□ 0.96
PPP3R1-201ENST00000234310 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
PPP3R1-201ENST00000234310 ATP1B4Q9UN42 357 aaPredicted RBP21.03■□□□□ 0.96
PPP3R1-201ENST00000234310 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
PPP3R1-201ENST00000234310 TDRD9Q8NDG6 1382 aaKnown RBP21■□□□□ 0.95
PPP3R1-201ENST00000234310 FHOD3Q2V2M9 1422 aa20.97■□□□□ 0.95
PPP3R1-201ENST00000234310 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
PPP3R1-201ENST00000234310 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
PPP3R1-201ENST00000234310 ZNF316A6NFI3 1004 aaPredicted RBP20.95■□□□□ 0.94
PPP3R1-201ENST00000234310 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
PPP3R1-201ENST00000234310 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
PPP3R1-201ENST00000234310 CCNB3Q8WWL7 1395 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms