RNA–Protein interactions for RNA: ENST00000229922.6

CAP2-201, Transcript of cyclase associated actin cytoskeleton regulatory protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAP2, Length 3,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP2-201ENST00000229922 NISCHQ9Y2I1 1504 aa21.73■■□□□ 1.07
CAP2-201ENST00000229922 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
CAP2-201ENST00000229922 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
CAP2-201ENST00000229922 SUPT5HO00267 1087 aaKnown RBP19.32■□□□□ 0.68
CAP2-201ENST00000229922 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
CAP2-201ENST00000229922 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
CAP2-201ENST00000229922 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
CAP2-201ENST00000229922 PCGF6Q9BYE7 350 aa18.21■□□□□ 0.51
CAP2-201ENST00000229922 LOC105371045A0A1W2PR82 267 aa18.12■□□□□ 0.49
CAP2-201ENST00000229922 MYO15BQ96JP2 1530 aa18.07■□□□□ 0.48
CAP2-201ENST00000229922 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.48
CAP2-201ENST00000229922 HRCP23327 699 aa18.01■□□□□ 0.47
CAP2-201ENST00000229922 CCDC180Q9P1Z9 1646 aa17.99■□□□□ 0.47
CAP2-201ENST00000229922 PPARGC1BQ86YN6 1023 aaKnown RBP17.88■□□□□ 0.45
CAP2-201ENST00000229922 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
CAP2-201ENST00000229922 ABCC9O60706 1549 aa17.63■□□□□ 0.41
CAP2-201ENST00000229922 PELP1Q8IZL8 1130 aaKnown RBP17.62■□□□□ 0.41
CAP2-201ENST00000229922 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
CAP2-201ENST00000229922 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
CAP2-201ENST00000229922 TRIM26Q12899 539 aaPredicted RBP17.46■□□□□ 0.39
CAP2-201ENST00000229922 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.37
CAP2-201ENST00000229922 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
CAP2-201ENST00000229922 CECR2Q9BXF3 1484 aa17.25■□□□□ 0.35
CAP2-201ENST00000229922 RB1CC1Q8TDY2 1594 aa17.21■□□□□ 0.35
CAP2-201ENST00000229922 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
CAP2-201ENST00000229922 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
CAP2-201ENST00000229922 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
CAP2-201ENST00000229922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
CAP2-201ENST00000229922 CCER1Q8TC90 406 aaPredicted RBP17.08■□□□□ 0.32
CAP2-201ENST00000229922 UBTFP17480 764 aaKnown RBP17.07■□□□□ 0.32
CAP2-201ENST00000229922 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
CAP2-201ENST00000229922 ZEB1P37275 1124 aaPredicted RBP16.99■□□□□ 0.31
CAP2-201ENST00000229922 MYT1Q01538 1121 aa16.96■□□□□ 0.31
CAP2-201ENST00000229922 WIZO95785 1651 aa16.95■□□□□ 0.3
CAP2-201ENST00000229922 NACADO15069 1562 aa16.88■□□□□ 0.29
CAP2-201ENST00000229922 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
CAP2-201ENST00000229922 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
CAP2-201ENST00000229922 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
CAP2-201ENST00000229922 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
CAP2-201ENST00000229922 SOGA1O94964 1423 aa16.72■□□□□ 0.27
CAP2-201ENST00000229922 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
CAP2-201ENST00000229922 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
CAP2-201ENST00000229922 NEUROD1Q13562 356 aa16.71■□□□□ 0.27
CAP2-201ENST00000229922 APLP2Q06481 763 aa16.7■□□□□ 0.26
CAP2-201ENST00000229922 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
CAP2-201ENST00000229922 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
CAP2-201ENST00000229922 CENPBP07199 599 aaPredicted RBP16.64■□□□□ 0.25
CAP2-201ENST00000229922 RUSC2Q8N2Y8 1516 aa16.62■□□□□ 0.25
CAP2-201ENST00000229922 DIEXFQ68CQ4 756 aaKnown RBP16.61■□□□□ 0.25
CAP2-201ENST00000229922 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
CAP2-201ENST00000229922 ITGAEP38570 1179 aa16.52■□□□□ 0.24
CAP2-201ENST00000229922 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
CAP2-201ENST00000229922 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
CAP2-201ENST00000229922 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
CAP2-201ENST00000229922 ATP1B4Q9UN42 357 aaPredicted RBP16.44■□□□□ 0.22
CAP2-201ENST00000229922 SMARCA2P51531 1590 aa16.44■□□□□ 0.22
CAP2-201ENST00000229922 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
CAP2-201ENST00000229922 CLIP1P30622 1438 aa16.34■□□□□ 0.21
CAP2-201ENST00000229922 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
CAP2-201ENST00000229922 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
CAP2-201ENST00000229922 BAZ1BQ9UIG0 1483 aaKnown RBP16.3■□□□□ 0.2
CAP2-201ENST00000229922 P3H3Q8IVL6 736 aa16.27■□□□□ 0.19
CAP2-201ENST00000229922 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
CAP2-201ENST00000229922 MIER1Q8N108 512 aa16.25■□□□□ 0.19
CAP2-201ENST00000229922 EIF4G1Q04637 1599 aaKnown RBP16.24■□□□□ 0.19
CAP2-201ENST00000229922 EEA1Q15075 1411 aa16.24■□□□□ 0.19
CAP2-201ENST00000229922 RAPGEF2Q9Y4G8 1499 aa16.23■□□□□ 0.19
CAP2-201ENST00000229922 ATAD2BQ9ULI0 1458 aa16.21■□□□□ 0.18
CAP2-201ENST00000229922 CEP164Q9UPV0 1460 aa16.2■□□□□ 0.18
CAP2-201ENST00000229922 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
CAP2-201ENST00000229922 SYNJ1O43426 1573 aa16.18■□□□□ 0.18
CAP2-201ENST00000229922 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
CAP2-201ENST00000229922 FAM50AQ14320 339 aaKnown RBP16.12■□□□□ 0.17
CAP2-201ENST00000229922 VPS8Q8N3P4 1428 aa16.1■□□□□ 0.17
CAP2-201ENST00000229922 HIRIP3Q9BW71 556 aaPredicted RBP16■□□□□ 0.15
CAP2-201ENST00000229922 BCL11AQ9H165 835 aa15.96■□□□□ 0.15
CAP2-201ENST00000229922 ARID3CA6NKF2 412 aa15.96■□□□□ 0.15
CAP2-201ENST00000229922 KIF27Q86VH2 1401 aa15.94■□□□□ 0.14
CAP2-201ENST00000229922 KIF21BO75037 1637 aa15.94■□□□□ 0.14
CAP2-201ENST00000229922 CUX2O14529 1486 aa15.9■□□□□ 0.14
CAP2-201ENST00000229922 SIN3AQ96ST3 1273 aa15.89■□□□□ 0.13
CAP2-201ENST00000229922 ARAP1Q96P48 1450 aa15.87■□□□□ 0.13
CAP2-201ENST00000229922 BCANQ96GW7 911 aa15.86■□□□□ 0.13
CAP2-201ENST00000229922 DDX10Q13206 875 aaKnown RBP15.85■□□□□ 0.13
CAP2-201ENST00000229922 ANP32EQ9BTT0 268 aa15.85■□□□□ 0.13
CAP2-201ENST00000229922 DHX57Q6P158 1386 aaKnown RBP15.85■□□□□ 0.13
CAP2-201ENST00000229922 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.12
CAP2-201ENST00000229922 CCNB3Q8WWL7 1395 aa15.83■□□□□ 0.12
CAP2-201ENST00000229922 KCNH8Q96L42 1107 aa15.83■□□□□ 0.12
CAP2-201ENST00000229922 CUX1P39880 1505 aa15.82■□□□□ 0.12
CAP2-201ENST00000229922 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
CAP2-201ENST00000229922 TOP2BQ02880 1626 aa15.8■□□□□ 0.12
CAP2-201ENST00000229922 CNGB1Q14028 1251 aaPredicted RBP15.79■□□□□ 0.12
CAP2-201ENST00000229922 PRXQ9BXM0 1461 aa15.77■□□□□ 0.12
CAP2-201ENST00000229922 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
CAP2-201ENST00000229922 IGF1RP08069 1367 aa15.75■□□□□ 0.11
CAP2-201ENST00000229922 RAB3GAP2Q9H2M9 1393 aa15.75■□□□□ 0.11
CAP2-201ENST00000229922 CHIC2Q9UKJ5 165 aa15.74■□□□□ 0.11
CAP2-201ENST00000229922 NCAPD3P42695 1498 aa15.74■□□□□ 0.11
CAP2-201ENST00000229922 ARHGAP35Q9NRY4 1499 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms