RNA–Protein interactions for RNA: ENST00000228811.8

PRR4-201, Transcript of proline rich 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRR4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRR4-201ENST00000228811 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
PRR4-201ENST00000228811 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
PRR4-201ENST00000228811 SENP3Q9H4L4 574 aaPredicted RBP22.61■■□□□ 1.21
PRR4-201ENST00000228811 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
PRR4-201ENST00000228811 FOXD1Q16676 465 aa21.08■□□□□ 0.97
PRR4-201ENST00000228811 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
PRR4-201ENST00000228811 MSH5O43196 834 aa19.8■□□□□ 0.76
PRR4-201ENST00000228811 PIAS4Q8N2W9 510 aaPredicted RBP19.6■□□□□ 0.73
PRR4-201ENST00000228811 PPP6R1Q9UPN7 881 aa19.59■□□□□ 0.73
PRR4-201ENST00000228811 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
PRR4-201ENST00000228811 ADRA2BP18089 450 aa19.46■□□□□ 0.71
PRR4-201ENST00000228811 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
PRR4-201ENST00000228811 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
PRR4-201ENST00000228811 SCAF1Q9H7N4 1312 aaKnown RBP17.86■□□□□ 0.45
PRR4-201ENST00000228811 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
PRR4-201ENST00000228811 HOXD11P31277 338 aaPredicted RBP17.27■□□□□ 0.36
PRR4-201ENST00000228811 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
PRR4-201ENST00000228811 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
PRR4-201ENST00000228811 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
PRR4-201ENST00000228811 CACNB1Q02641 598 aaPredicted RBP16.95■□□□□ 0.3
PRR4-201ENST00000228811 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
PRR4-201ENST00000228811 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
PRR4-201ENST00000228811 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
PRR4-201ENST00000228811 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
PRR4-201ENST00000228811 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
PRR4-201ENST00000228811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.27■□□□□ 0.21e-10■■■■□ 20.6
PRR4-201ENST00000228811 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
PRR4-201ENST00000228811 KCNA4P22459 653 aa16.01■□□□□ 0.15
PRR4-201ENST00000228811 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
PRR4-201ENST00000228811 SPINK5Q9NQ38 1064 aaPredicted RBP15.77■□□□□ 0.12
PRR4-201ENST00000228811 DSG3P32926 999 aa15.76■□□□□ 0.11
PRR4-201ENST00000228811 CAPN15O75808 1086 aa15.69■□□□□ 0.1
PRR4-201ENST00000228811 APLP2Q06481 763 aa15.55■□□□□ 0.08
PRR4-201ENST00000228811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
PRR4-201ENST00000228811 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.08
PRR4-201ENST00000228811 ZNF219Q9P2Y4 722 aaPredicted RBP15.48■□□□□ 0.07
PRR4-201ENST00000228811 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
PRR4-201ENST00000228811 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
PRR4-201ENST00000228811 ABCB7O75027 752 aa15.29■□□□□ 0.04
PRR4-201ENST00000228811 MYCNP04198 464 aaPredicted RBP15.27■□□□□ 0.04
PRR4-201ENST00000228811 POTEHQ6S545 545 aa15.25■□□□□ 0.03
PRR4-201ENST00000228811 SLC4A1APQ9BWU0 796 aaKnown RBP15.06■□□□□ 0
PRR4-201ENST00000228811 RBM42Q9BTD8 480 aaKnown RBP15.03■□□□□ -0
PRR4-201ENST00000228811 FOXD4L1Q9NU39 408 aa15.02■□□□□ -0
PRR4-201ENST00000228811 POLA2Q14181 598 aa15.01□□□□□ -0.01
PRR4-201ENST00000228811 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
PRR4-201ENST00000228811 ZBTB12Q9Y330 459 aaPredicted RBP14.77□□□□□ -0.05
PRR4-201ENST00000228811 ZBTB22O15209 634 aa14.74□□□□□ -0.05
PRR4-201ENST00000228811 CHRDL2Q6WN34 429 aa14.72□□□□□ -0.05
PRR4-201ENST00000228811 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
PRR4-201ENST00000228811 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
PRR4-201ENST00000228811 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
PRR4-201ENST00000228811 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
PRR4-201ENST00000228811 PIP4P2Q8N4L2 257 aa14.35□□□□□ -0.11
PRR4-201ENST00000228811 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
PRR4-201ENST00000228811 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRR4-201ENST00000228811 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
PRR4-201ENST00000228811 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
PRR4-201ENST00000228811 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
PRR4-201ENST00000228811 FBLN2P98095 1184 aa14.28□□□□□ -0.12
PRR4-201ENST00000228811 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
PRR4-201ENST00000228811 MKRN4PQ13434 485 aaPredicted RBP14.23□□□□□ -0.13
PRR4-201ENST00000228811 SSUH2Q9Y2M2 353 aa14.14□□□□□ -0.15
PRR4-201ENST00000228811 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
PRR4-201ENST00000228811 HAX1O00165 279 aa14.03□□□□□ -0.16
PRR4-201ENST00000228811 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
PRR4-201ENST00000228811 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
PRR4-201ENST00000228811 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
PRR4-201ENST00000228811 EVX2Q03828 476 aa13.93□□□□□ -0.18
PRR4-201ENST00000228811 CLEC11AQ9Y240 323 aa13.92□□□□□ -0.18
PRR4-201ENST00000228811 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
PRR4-201ENST00000228811 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
PRR4-201ENST00000228811 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
PRR4-201ENST00000228811 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
PRR4-201ENST00000228811 GABBR2O75899 941 aa13.61□□□□□ -0.23
PRR4-201ENST00000228811 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
PRR4-201ENST00000228811 EHMT2Q96KQ7 1210 aa13.52□□□□□ -0.25
PRR4-201ENST00000228811 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
PRR4-201ENST00000228811 CLCN6P51797 869 aa13.48□□□□□ -0.25
PRR4-201ENST00000228811 STAG3Q9UJ98 1225 aa13.47□□□□□ -0.25
PRR4-201ENST00000228811 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
PRR4-201ENST00000228811 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
PRR4-201ENST00000228811 POTEIP0CG38 1075 aa13.37□□□□□ -0.27
PRR4-201ENST00000228811 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
PRR4-201ENST00000228811 LHX8Q68G74 356 aa13.33□□□□□ -0.28
PRR4-201ENST00000228811 PROM2Q8N271 834 aa13.26□□□□□ -0.29
PRR4-201ENST00000228811 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
PRR4-201ENST00000228811 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
PRR4-201ENST00000228811 DCBLD2Q96PD2 775 aa13.15□□□□□ -0.3
PRR4-201ENST00000228811 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
PRR4-201ENST00000228811 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
PRR4-201ENST00000228811 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
PRR4-201ENST00000228811 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
PRR4-201ENST00000228811 ASTLQ6HA08 431 aaPredicted RBP12.93□□□□□ -0.34
PRR4-201ENST00000228811 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
PRR4-201ENST00000228811 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
PRR4-201ENST00000228811 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
PRR4-201ENST00000228811 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
PRR4-201ENST00000228811 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
PRR4-201ENST00000228811 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms