RNA–Protein interactions for RNA: ENST00000226522.8

LAMTOR3-201, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 3, humanhuman

TSL 3 BASIC

Gene LAMTOR3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMTOR3-201ENST00000226522 AEBP2Q6ZN18 517 aaPredicted RBP31.59■■■□□ 2.65
LAMTOR3-201ENST00000226522 CHIC1Q5VXU3 224 aa31.21■■■□□ 2.59
LAMTOR3-201ENST00000226522 PHF23Q9BUL5 403 aaPredicted RBP27.49■■□□□ 1.99
LAMTOR3-201ENST00000226522 SENP3Q9H4L4 574 aaPredicted RBP26.75■■□□□ 1.87
LAMTOR3-201ENST00000226522 PLPPR3Q6T4P5 718 aa25.53■■□□□ 1.68
LAMTOR3-201ENST00000226522 FOXD1Q16676 465 aa24.79■■□□□ 1.56
LAMTOR3-201ENST00000226522 ADRA2BP18089 450 aa24.17■■□□□ 1.46
LAMTOR3-201ENST00000226522 PPP6R1Q9UPN7 881 aa24.15■■□□□ 1.46
LAMTOR3-201ENST00000226522 PIAS4Q8N2W9 510 aaPredicted RBP23.5■■□□□ 1.35
LAMTOR3-201ENST00000226522 MSH5O43196 834 aa22.7■■□□□ 1.22
LAMTOR3-201ENST00000226522 PPP4R3CPQ6ZMV5 832 aa22.55■■□□□ 1.2
LAMTOR3-201ENST00000226522 KCNA4P22459 653 aa22.46■■□□□ 1.19
LAMTOR3-201ENST00000226522 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
LAMTOR3-201ENST00000226522 NCBP3Q53F19 620 aaKnown RBP22.07■■□□□ 1.12
LAMTOR3-201ENST00000226522 MAPK8IP2Q13387 824 aaPredicted RBP21.82■■□□□ 1.08
LAMTOR3-201ENST00000226522 CNKSR2Q8WXI2 1034 aa21.82■■□□□ 1.08
LAMTOR3-201ENST00000226522 NPM3O75607 178 aaKnown RBP21.74■■□□□ 1.07
LAMTOR3-201ENST00000226522 SLC4A1APQ9BWU0 796 aaKnown RBP21.47■■□□□ 1.03
LAMTOR3-201ENST00000226522 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
LAMTOR3-201ENST00000226522 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
LAMTOR3-201ENST00000226522 RNF216Q9NWF9 866 aaPredicted RBP21.29■■□□□ 1
LAMTOR3-201ENST00000226522 HOXD11P31277 338 aaPredicted RBP21.09■□□□□ 0.97
LAMTOR3-201ENST00000226522 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
LAMTOR3-201ENST00000226522 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
LAMTOR3-201ENST00000226522 ZBTB22O15209 634 aa20.66■□□□□ 0.9
LAMTOR3-201ENST00000226522 DCAF8L1A6NGE4 600 aa20.55■□□□□ 0.88
LAMTOR3-201ENST00000226522 FOXD4L1Q9NU39 408 aa20.55■□□□□ 0.88
LAMTOR3-201ENST00000226522 SLC4A2P04920 1241 aa20.42■□□□□ 0.86
LAMTOR3-201ENST00000226522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.16■□□□□ 0.82
LAMTOR3-201ENST00000226522 MYCNP04198 464 aaPredicted RBP20.08■□□□□ 0.81
LAMTOR3-201ENST00000226522 POTEDQ86YR6 584 aa20.02■□□□□ 0.8
LAMTOR3-201ENST00000226522 U3KPZ7 1027 aaPredicted RBP19.85■□□□□ 0.77
LAMTOR3-201ENST00000226522 ATXN8OSP0DMR3 200 aa19.77■□□□□ 0.76
LAMTOR3-201ENST00000226522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.73■□□□□ 0.75
LAMTOR3-201ENST00000226522 HNRNPUL2Q1KMD3 747 aaKnown RBP19.73■□□□□ 0.75
LAMTOR3-201ENST00000226522 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
LAMTOR3-201ENST00000226522 ATF5Q9Y2D1 282 aaPredicted RBP19.53■□□□□ 0.72
LAMTOR3-201ENST00000226522 RNF39Q9H2S5 420 aa19.48■□□□□ 0.71
LAMTOR3-201ENST00000226522 APLP2Q06481 763 aa19.43■□□□□ 0.7
LAMTOR3-201ENST00000226522 C1QBPQ07021 282 aaKnown RBP19.27■□□□□ 0.68
LAMTOR3-201ENST00000226522 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
LAMTOR3-201ENST00000226522 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
LAMTOR3-201ENST00000226522 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
LAMTOR3-201ENST00000226522 CAPN15O75808 1086 aa19.13■□□□□ 0.65
LAMTOR3-201ENST00000226522 POLA2Q14181 598 aa18.89■□□□□ 0.61
LAMTOR3-201ENST00000226522 FKBP8Q14318 412 aa18.87■□□□□ 0.61
LAMTOR3-201ENST00000226522 ABCB7O75027 752 aa18.81■□□□□ 0.6
LAMTOR3-201ENST00000226522 CACNB1Q02641 598 aaPredicted RBP18.75■□□□□ 0.59
LAMTOR3-201ENST00000226522 FBLN2P98095 1184 aa18.7■□□□□ 0.58
LAMTOR3-201ENST00000226522 DSG3P32926 999 aa18.68■□□□□ 0.58
LAMTOR3-201ENST00000226522 MKRN4PQ13434 485 aaPredicted RBP18.68■□□□□ 0.58
LAMTOR3-201ENST00000226522 ZBTB12Q9Y330 459 aaPredicted RBP18.58■□□□□ 0.56
LAMTOR3-201ENST00000226522 SPDYE4A6NLX3 237 aa18.47■□□□□ 0.55
LAMTOR3-201ENST00000226522 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
LAMTOR3-201ENST00000226522 PROM2Q8N271 834 aa18.15■□□□□ 0.5
LAMTOR3-201ENST00000226522 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
LAMTOR3-201ENST00000226522 SPDYE2BA6NHP3 402 aa18.11■□□□□ 0.49
LAMTOR3-201ENST00000226522 SPDYE6P0CI01 402 aa18.11■□□□□ 0.49
LAMTOR3-201ENST00000226522 SPDYE2Q495Y8 402 aa18.11■□□□□ 0.49
LAMTOR3-201ENST00000226522 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
LAMTOR3-201ENST00000226522 SSUH2Q9Y2M2 353 aa18■□□□□ 0.47
LAMTOR3-201ENST00000226522 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
LAMTOR3-201ENST00000226522 AMER1Q5JTC6 1135 aaPredicted RBP17.83■□□□□ 0.44
LAMTOR3-201ENST00000226522 VASPP50552 380 aaPredicted RBP17.81■□□□□ 0.44
LAMTOR3-201ENST00000226522 RTN4Q9NQC3 1192 aaKnown RBP17.81■□□□□ 0.44
LAMTOR3-201ENST00000226522 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
LAMTOR3-201ENST00000226522 STAG3Q9UJ98 1225 aa17.67■□□□□ 0.42
LAMTOR3-201ENST00000226522 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
LAMTOR3-201ENST00000226522 IFNLR1Q8IU57 520 aaPredicted RBP17.6■□□□□ 0.41
LAMTOR3-201ENST00000226522 PLCD3Q8N3E9 789 aa17.52■□□□□ 0.4
LAMTOR3-201ENST00000226522 MIER1Q8N108 512 aa17.5■□□□□ 0.39
LAMTOR3-201ENST00000226522 SPDYE1Q8NFV5 336 aaPredicted RBP17.5■□□□□ 0.39
LAMTOR3-201ENST00000226522 REM2Q8IYK8 340 aaPredicted RBP17.49■□□□□ 0.39
LAMTOR3-201ENST00000226522 KLHL34Q8N239 644 aa17.46■□□□□ 0.39
LAMTOR3-201ENST00000226522 CLEC11AQ9Y240 323 aa17.45■□□□□ 0.38
LAMTOR3-201ENST00000226522 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
LAMTOR3-201ENST00000226522 SPOCK2Q92563 424 aa17.33■□□□□ 0.36
LAMTOR3-201ENST00000226522 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
LAMTOR3-201ENST00000226522 PITPNM1O00562 1244 aa17.3■□□□□ 0.36
LAMTOR3-201ENST00000226522 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
LAMTOR3-201ENST00000226522 CREBZFQ9NS37 354 aa17.16■□□□□ 0.34
LAMTOR3-201ENST00000226522 PKD2Q13563 968 aa17.14■□□□□ 0.33
LAMTOR3-201ENST00000226522 CIZ1Q9ULV3 898 aaPredicted RBP17.04■□□□□ 0.32
LAMTOR3-201ENST00000226522 MNX1P50219 401 aaPredicted RBP17.01■□□□□ 0.31
LAMTOR3-201ENST00000226522 ECM2O94769 699 aaPredicted RBP17■□□□□ 0.31
LAMTOR3-201ENST00000226522 DCAF8L2P0C7V8 631 aa16.98■□□□□ 0.31
LAMTOR3-201ENST00000226522 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
LAMTOR3-201ENST00000226522 NUBP1P53384 320 aa16.96■□□□□ 0.31
LAMTOR3-201ENST00000226522 CHRDL2Q6WN34 429 aa16.91■□□□□ 0.3
LAMTOR3-201ENST00000226522 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
LAMTOR3-201ENST00000226522 GSE1Q14687 1217 aa16.89■□□□□ 0.29
LAMTOR3-201ENST00000226522 DCAF8Q5TAQ9 597 aa16.89■□□□□ 0.29
LAMTOR3-201ENST00000226522 PRKAR2AP13861 404 aaKnown RBP16.88■□□□□ 0.29
LAMTOR3-201ENST00000226522 FXR2P51116 673 aaKnown RBP eCLIP16.87■□□□□ 0.29
LAMTOR3-201ENST00000226522 FAM212AQ96EL1 285 aa16.85■□□□□ 0.29
LAMTOR3-201ENST00000226522 RASEFQ8IZ41 740 aa16.83■□□□□ 0.28
LAMTOR3-201ENST00000226522 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
LAMTOR3-201ENST00000226522 FARP1Q9Y4F1 1045 aaPredicted RBP16.82■□□□□ 0.28
LAMTOR3-201ENST00000226522 RGL2O15211 777 aa16.81■□□□□ 0.28
LAMTOR3-201ENST00000226522 PIP4P2Q8N4L2 257 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms