RNA–Protein interactions for RNA: ENST00000209728.8

CDC6-201, Transcript of cell division cycle 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC6, Length 4,810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-201ENST00000209728 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
CDC6-201ENST00000209728 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
CDC6-201ENST00000209728 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
CDC6-201ENST00000209728 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
CDC6-201ENST00000209728 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
CDC6-201ENST00000209728 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
CDC6-201ENST00000209728 FAM9AQ8IZU1 332 aaPredicted RBP20.06■□□□□ 0.8
CDC6-201ENST00000209728 TTBK1Q5TCY1 1321 aaPredicted RBP19.81■□□□□ 0.76
CDC6-201ENST00000209728 TRIM41Q8WV44 630 aa19.67■□□□□ 0.74
CDC6-201ENST00000209728 APLP2Q06481 763 aa19.62■□□□□ 0.73
CDC6-201ENST00000209728 ZEB1P37275 1124 aaPredicted RBP19.52■□□□□ 0.71
CDC6-201ENST00000209728 CCER1Q8TC90 406 aaPredicted RBP19.49■□□□□ 0.71
CDC6-201ENST00000209728 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
CDC6-201ENST00000209728 HRCP23327 699 aa19.44■□□□□ 0.7
CDC6-201ENST00000209728 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
CDC6-201ENST00000209728 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.7
CDC6-201ENST00000209728 PPARGC1BQ86YN6 1023 aaKnown RBP19.38■□□□□ 0.69
CDC6-201ENST00000209728 LOC105371045A0A1W2PR82 267 aa19.37■□□□□ 0.69
CDC6-201ENST00000209728 CENPBP07199 599 aaPredicted RBP19.34■□□□□ 0.69
CDC6-201ENST00000209728 TRIM26Q12899 539 aaPredicted RBP19.3■□□□□ 0.68
CDC6-201ENST00000209728 UBTFP17480 764 aaKnown RBP19.25■□□□□ 0.67
CDC6-201ENST00000209728 YTHDC1Q96MU7 727 aaKnown RBP19.13■□□□□ 0.65
CDC6-201ENST00000209728 ATP1B4Q9UN42 357 aaPredicted RBP18.99■□□□□ 0.63
CDC6-201ENST00000209728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
CDC6-201ENST00000209728 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
CDC6-201ENST00000209728 ERICH6Q7L0X2 663 aa18.71■□□□□ 0.59
CDC6-201ENST00000209728 ITGAEP38570 1179 aa18.69■□□□□ 0.58
CDC6-201ENST00000209728 NEFLP07196 543 aa18.67■□□□□ 0.58
CDC6-201ENST00000209728 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
CDC6-201ENST00000209728 MYT1Q01538 1121 aa18.53■□□□□ 0.56
CDC6-201ENST00000209728 GTF3C3Q9Y5Q9 886 aa18.37■□□□□ 0.53
CDC6-201ENST00000209728 ABCC9O60706 1549 aa18.35■□□□□ 0.53
CDC6-201ENST00000209728 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
CDC6-201ENST00000209728 POLR3GLQ9BT43 218 aa18.26■□□□□ 0.51
CDC6-201ENST00000209728 CNGB1Q14028 1251 aaPredicted RBP18.26■□□□□ 0.51
CDC6-201ENST00000209728 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
CDC6-201ENST00000209728 ZNF316A6NFI3 1004 aaPredicted RBP18.19■□□□□ 0.5
CDC6-201ENST00000209728 ACIN1Q9UKV3 1341 aaKnown RBP18.17■□□□□ 0.5
CDC6-201ENST00000209728 FAM50AQ14320 339 aaKnown RBP18.17■□□□□ 0.5
CDC6-201ENST00000209728 DCAF1Q9Y4B6 1507 aa18.17■□□□□ 0.5
CDC6-201ENST00000209728 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
CDC6-201ENST00000209728 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
CDC6-201ENST00000209728 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
CDC6-201ENST00000209728 BCANQ96GW7 911 aa18.09■□□□□ 0.49
CDC6-201ENST00000209728 SCRIBQ14160 1630 aa17.96■□□□□ 0.47
CDC6-201ENST00000209728 TRIM52Q96A61 297 aa17.94■□□□□ 0.46
CDC6-201ENST00000209728 ANP32CO43423 234 aa17.89■□□□□ 0.45
CDC6-201ENST00000209728 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
CDC6-201ENST00000209728 DAXXQ9UER7 740 aaPredicted RBP17.88■□□□□ 0.45
CDC6-201ENST00000209728 P3H3Q8IVL6 736 aa17.87■□□□□ 0.45
CDC6-201ENST00000209728 MYT1LQ9UL68 1186 aa17.86■□□□□ 0.45
CDC6-201ENST00000209728 ZNF326Q5BKZ1 582 aaKnown RBP17.77■□□□□ 0.43
CDC6-201ENST00000209728 CCDC180Q9P1Z9 1646 aa17.71■□□□□ 0.43
CDC6-201ENST00000209728 RTL5Q5HYW3 569 aaPredicted RBP17.71■□□□□ 0.43
CDC6-201ENST00000209728 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
CDC6-201ENST00000209728 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
CDC6-201ENST00000209728 MIER1Q8N108 512 aa17.7■□□□□ 0.42
CDC6-201ENST00000209728 ARID3CA6NKF2 412 aa17.69■□□□□ 0.42
CDC6-201ENST00000209728 DDX10Q13206 875 aaKnown RBP17.65■□□□□ 0.42
CDC6-201ENST00000209728 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.42
CDC6-201ENST00000209728 FKBP8Q14318 412 aa17.64■□□□□ 0.41
CDC6-201ENST00000209728 CLSPNQ9HAW4 1339 aa17.62■□□□□ 0.41
CDC6-201ENST00000209728 CEP162Q5TB80 1403 aa17.54■□□□□ 0.4
CDC6-201ENST00000209728 FBLN2P98095 1184 aa17.53■□□□□ 0.4
CDC6-201ENST00000209728 CLIP1P30622 1438 aa17.53■□□□□ 0.4
CDC6-201ENST00000209728 TONSLQ96HA7 1378 aa17.52■□□□□ 0.4
CDC6-201ENST00000209728 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDC6-201ENST00000209728 HIRIP3Q9BW71 556 aaPredicted RBP17.49■□□□□ 0.39
CDC6-201ENST00000209728 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
CDC6-201ENST00000209728 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
CDC6-201ENST00000209728 CHIC2Q9UKJ5 165 aa17.41■□□□□ 0.38
CDC6-201ENST00000209728 GOLGA3Q08378 1498 aa17.38■□□□□ 0.37
CDC6-201ENST00000209728 TNIKQ9UKE5 1360 aa17.36■□□□□ 0.37
CDC6-201ENST00000209728 EEA1Q15075 1411 aa17.35■□□□□ 0.37
CDC6-201ENST00000209728 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
CDC6-201ENST00000209728 ANP32AP39687 249 aaKnown RBP17.34■□□□□ 0.37
CDC6-201ENST00000209728 IRX6P78412 446 aaPredicted RBP17.33■□□□□ 0.37
CDC6-201ENST00000209728 CECR2Q9BXF3 1484 aa17.32■□□□□ 0.36
CDC6-201ENST00000209728 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.36
CDC6-201ENST00000209728 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
CDC6-201ENST00000209728 RB1CC1Q8TDY2 1594 aa17.29■□□□□ 0.36
CDC6-201ENST00000209728 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
CDC6-201ENST00000209728 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
CDC6-201ENST00000209728 CANXP27824 592 aaKnown RBP17.25■□□□□ 0.35
CDC6-201ENST00000209728 SOGA1O94964 1423 aa17.23■□□□□ 0.35
CDC6-201ENST00000209728 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.34
CDC6-201ENST00000209728 BCL11AQ9H165 835 aa17.2■□□□□ 0.34
CDC6-201ENST00000209728 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
CDC6-201ENST00000209728 CCDC136Q96JN2 1154 aa17.19■□□□□ 0.34
CDC6-201ENST00000209728 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
CDC6-201ENST00000209728 SIN3AQ96ST3 1273 aa17.17■□□□□ 0.34
CDC6-201ENST00000209728 NBR1Q14596 966 aa17.15■□□□□ 0.34
CDC6-201ENST00000209728 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDC6-201ENST00000209728 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
CDC6-201ENST00000209728 NACADO15069 1562 aa17.14■□□□□ 0.33
CDC6-201ENST00000209728 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
CDC6-201ENST00000209728 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
CDC6-201ENST00000209728 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
CDC6-201ENST00000209728 MROH2BQ7Z745 1585 aa17.09■□□□□ 0.33
CDC6-201ENST00000209728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.321e-7■■■■□ 19.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms