RNA–Protein interactions for RNA: ENSMUST00000225489.1

3830408C21Rik-206, mousemouse

BASIC

Gene 3830408C21Rik, Length 1,810 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
3830408C21Rik-206ENSMUST00000225489 Gm35339A0A140LHH9 1649 aa39.42■■■■□ 3.9
3830408C21Rik-206ENSMUST00000225489 NischQ80TM9 1593 aa39.35■■■■□ 3.89
3830408C21Rik-206ENSMUST00000225489 Abcc9P70170 1546 aa38.21■■■■□ 3.71
3830408C21Rik-206ENSMUST00000225489 Abcc8B2RUS7 1588 aa37.73■■■■□ 3.63
3830408C21Rik-206ENSMUST00000225489 ScribQ80U72 1612 aa35.73■■■■□ 3.31
3830408C21Rik-206ENSMUST00000225489 Dcaf1Q80TR8 1506 aa35.1■■■■□ 3.21
3830408C21Rik-206ENSMUST00000225489 Rhox8Q6VSS7 320 aa35.02■■■■□ 3.2
3830408C21Rik-206ENSMUST00000225489 Kdm5dQ62240 1548 aa34.81■■■■□ 3.16
3830408C21Rik-206ENSMUST00000225489 NacadQ5SWP3 1504 aa34.74■■■■□ 3.15
3830408C21Rik-206ENSMUST00000225489 Rb1cc1Q9ESK9 1588 aa34.39■■■■□ 3.1
3830408C21Rik-206ENSMUST00000225489 Ccdc180J3QNE4 1664 aa34.18■■■■□ 3.06
3830408C21Rik-206ENSMUST00000225489 Sycp2Q9CUU3 1500 aa34.01■■■■□ 3.04
3830408C21Rik-206ENSMUST00000225489 Baz1aO88379 1555 aa34■■■■□ 3.03
3830408C21Rik-206ENSMUST00000225489 Rtl1Q7M732 1744 aa33.83■■■■□ 3.01
3830408C21Rik-206ENSMUST00000225489 Crybg2B7ZCC2 1516 aa33.71■■■□□ 2.99
3830408C21Rik-206ENSMUST00000225489 BicraF8VPZ9 1578 aa33.36■■■□□ 2.93
3830408C21Rik-206ENSMUST00000225489 Zcchc6Q5BLK4 1491 aaKnown RBP33.26■■■□□ 2.92
3830408C21Rik-206ENSMUST00000225489 Smarca2Q6DIC0 1577 aa33.13■■■□□ 2.89
3830408C21Rik-206ENSMUST00000225489 Ccdc136Q3TVA9 1136 aa32.58■■■□□ 2.81
3830408C21Rik-206ENSMUST00000225489 Cecr2E9Q2Z1 1453 aa32.52■■■□□ 2.8
3830408C21Rik-206ENSMUST00000225489 Smarca4Q3TKT4 1613 aaKnown RBP32.3■■■□□ 2.76
3830408C21Rik-206ENSMUST00000225489 Brd4Q9ESU6 1400 aaKnown RBP32.24■■■□□ 2.75
3830408C21Rik-206ENSMUST00000225489 Pds5bQ4VA53 1446 aaKnown RBP32.18■■■□□ 2.74
3830408C21Rik-206ENSMUST00000225489 Trim41Q5NCC3 630 aa32.18■■■□□ 2.74
3830408C21Rik-206ENSMUST00000225489 Atad2bE9Q166 1460 aaKnown RBP32.12■■■□□ 2.73
3830408C21Rik-206ENSMUST00000225489 Synj1Q8CHC4 1574 aa32.06■■■□□ 2.72
3830408C21Rik-206ENSMUST00000225489 CftrP26361 1476 aa32.01■■■□□ 2.72
3830408C21Rik-206ENSMUST00000225489 Cttnbp2B9EJA2 1648 aa31.96■■■□□ 2.71
3830408C21Rik-206ENSMUST00000225489 Iqgap2Q3UQ44 1575 aa31.96■■■□□ 2.71
3830408C21Rik-206ENSMUST00000225489 Ercc6F8VPZ5 1481 aa31.54■■■□□ 2.64
3830408C21Rik-206ENSMUST00000225489 Wdr62Q3U3T8 1523 aa31.52■■■□□ 2.64
3830408C21Rik-206ENSMUST00000225489 Thoc2B1AZI6 1594 aaKnown RBP31.51■■■□□ 2.64
3830408C21Rik-206ENSMUST00000225489 Golga3P55937 1487 aa31.51■■■□□ 2.64
3830408C21Rik-206ENSMUST00000225489 Frmpd1A2AKB4 1549 aa31.46■■■□□ 2.63
3830408C21Rik-206ENSMUST00000225489 Esf1Q3V1V3 845 aaKnown RBP31.45■■■□□ 2.63
3830408C21Rik-206ENSMUST00000225489 HrcG5E8J6 738 aa31.45■■■□□ 2.62
3830408C21Rik-206ENSMUST00000225489 Top2bQ64511 1612 aa31.35■■■□□ 2.61
3830408C21Rik-206ENSMUST00000225489 Cngb1E1AZ71 1325 aa31.3■■■□□ 2.6
3830408C21Rik-206ENSMUST00000225489 Unc13aQ4KUS2 1712 aa31.11■■■□□ 2.57
3830408C21Rik-206ENSMUST00000225489 Cc2d2aQ8CFW7 1633 aa31.05■■■□□ 2.56
3830408C21Rik-206ENSMUST00000225489 Fam135aQ6NS59 1506 aa31.03■■■□□ 2.56
3830408C21Rik-206ENSMUST00000225489 Phldb1Q6PDH0 1371 aaKnown RBP31.02■■■□□ 2.56
3830408C21Rik-206ENSMUST00000225489 Rsf1E9PWW9 1441 aaKnown RBP30.97■■■□□ 2.55
3830408C21Rik-206ENSMUST00000225489 Ccdc88bQ4QRL3 1481 aa30.94■■■□□ 2.54
3830408C21Rik-206ENSMUST00000225489 Fmn1Q05860 1466 aa30.93■■■□□ 2.54
3830408C21Rik-206ENSMUST00000225489 Cep164Q5DU05 1446 aa30.93■■■□□ 2.54
3830408C21Rik-206ENSMUST00000225489 TnnQ80Z71 1560 aa30.83■■■□□ 2.53
3830408C21Rik-206ENSMUST00000225489 Lamc3Q9R0B6 1581 aa30.83■■■□□ 2.53
3830408C21Rik-206ENSMUST00000225489 Chic1Q8CBW7 227 aa30.82■■■□□ 2.52
3830408C21Rik-206ENSMUST00000225489 Dnajc5bQ9CQ94 199 aa30.73■■■□□ 2.51
3830408C21Rik-206ENSMUST00000225489 Baz1bQ9Z277 1479 aa30.71■■■□□ 2.51
3830408C21Rik-206ENSMUST00000225489 Kif15Q6P9L6 1387 aa30.69■■■□□ 2.5
3830408C21Rik-206ENSMUST00000225489 Ubl4bQ9CQ84 188 aa30.64■■■□□ 2.5
3830408C21Rik-206ENSMUST00000225489 Top2aQ01320 1528 aaKnown RBP30.58■■■□□ 2.49
3830408C21Rik-206ENSMUST00000225489 Cux2P70298 1426 aa30.42■■■□□ 2.46
3830408C21Rik-206ENSMUST00000225489 Camsap1A2AHC3 1581 aa30.4■■■□□ 2.46
3830408C21Rik-206ENSMUST00000225489 Ccdc18Q640L5 1455 aa30.35■■■□□ 2.45
3830408C21Rik-206ENSMUST00000225489 Mrc2Q64449 1479 aa30.29■■■□□ 2.44
3830408C21Rik-206ENSMUST00000225489 Gab3Q8BSM5 595 aa30.23■■■□□ 2.43
3830408C21Rik-206ENSMUST00000225489 Il27Q8K3I6 234 aa30.16■■■□□ 2.42
3830408C21Rik-206ENSMUST00000225489 Npm1Q61937 292 aaKnown RBP30.15■■■□□ 2.42
3830408C21Rik-206ENSMUST00000225489 Rapgef2Q8CHG7 1496 aa30.12■■■□□ 2.41
3830408C21Rik-206ENSMUST00000225489 Grin2bQ01097 1482 aa30.09■■■□□ 2.41
3830408C21Rik-206ENSMUST00000225489 NrkQ9R0G8 1455 aa30.06■■■□□ 2.4
3830408C21Rik-206ENSMUST00000225489 LrpprcQ6PB66 1392 aaKnown RBP30.02■■■□□ 2.4
3830408C21Rik-206ENSMUST00000225489 Shroom4Q1W617 1475 aa29.96■■■□□ 2.39
3830408C21Rik-206ENSMUST00000225489 Kif21aQ9QXL2 1672 aa29.96■■■□□ 2.39
3830408C21Rik-206ENSMUST00000225489 PogzQ8BZH4 1409 aaKnown RBP29.94■■■□□ 2.38
3830408C21Rik-206ENSMUST00000225489 PtprkP35822 1457 aa29.92■■■□□ 2.38
3830408C21Rik-206ENSMUST00000225489 Dhx29Q6PGC1 1365 aaKnown RBP29.86■■■□□ 2.37
3830408C21Rik-206ENSMUST00000225489 Cep162Q6ZQ06 1403 aa29.86■■■□□ 2.37
3830408C21Rik-206ENSMUST00000225489 Eif4g1Q6NZJ6 1600 aaKnown RBP29.84■■■□□ 2.37
3830408C21Rik-206ENSMUST00000225489 Efcab5A0JP43 1406 aa29.84■■■□□ 2.37
3830408C21Rik-206ENSMUST00000225489 Npm2Q80W85 207 aa29.82■■■□□ 2.36
3830408C21Rik-206ENSMUST00000225489 Duox2A2AQ99 1517 aa29.82■■■□□ 2.36
3830408C21Rik-206ENSMUST00000225489 Crocc2F6XLV1 1638 aa29.75■■■□□ 2.35
3830408C21Rik-206ENSMUST00000225489 Arhgap35Q91YM2 1499 aa29.69■■■□□ 2.34
3830408C21Rik-206ENSMUST00000225489 Map3k1P53349 1493 aa29.65■■■□□ 2.34
3830408C21Rik-206ENSMUST00000225489 Samd9lQ69Z37 1561 aa29.62■■■□□ 2.33
3830408C21Rik-206ENSMUST00000225489 Mroh2bQ7M6Y6 1581 aa29.61■■■□□ 2.33
3830408C21Rik-206ENSMUST00000225489 Lrriq1Q0P5X1 1673 aa29.56■■■□□ 2.32
3830408C21Rik-206ENSMUST00000225489 Plb1Q3TTY0 1478 aa29.54■■■□□ 2.32
3830408C21Rik-206ENSMUST00000225489 Urb2E9Q7L1 1524 aaKnown RBP29.53■■■□□ 2.32
3830408C21Rik-206ENSMUST00000225489 Myt1lP97500 1187 aa29.48■■■□□ 2.31
3830408C21Rik-206ENSMUST00000225489 AqrQ8CFQ3 1481 aaKnown RBP29.47■■■□□ 2.31
3830408C21Rik-206ENSMUST00000225489 SynmQ70IV5 1561 aa29.47■■■□□ 2.31
3830408C21Rik-206ENSMUST00000225489 Zeb1Q64318 1117 aa29.45■■■□□ 2.31
3830408C21Rik-206ENSMUST00000225489 Clip1Q922J3 1391 aa29.39■■■□□ 2.29
3830408C21Rik-206ENSMUST00000225489 Ift140E9PY46 1464 aa29.37■■■□□ 2.29
3830408C21Rik-206ENSMUST00000225489 Rad54l2Q99NG0 1466 aa29.37■■■□□ 2.29
3830408C21Rik-206ENSMUST00000225489 Carmil1Q6EDY6 1374 aa29.34■■■□□ 2.29
3830408C21Rik-206ENSMUST00000225489 Disp1Q3TDN0 1521 aa29.33■■■□□ 2.29
3830408C21Rik-206ENSMUST00000225489 Magi3Q9EQJ9 1476 aa29.28■■■□□ 2.28
3830408C21Rik-206ENSMUST00000225489 Pbrm1Q8BSQ9 1634 aaKnown RBP29.28■■■□□ 2.28
3830408C21Rik-206ENSMUST00000225489 Pla2r1Q62028 1487 aa29.23■■■□□ 2.27
3830408C21Rik-206ENSMUST00000225489 Grin2aP35436 1464 aa29.23■■■□□ 2.27
3830408C21Rik-206ENSMUST00000225489 Ehmt2Q9Z148 1263 aaKnown RBP29.22■■■□□ 2.27
3830408C21Rik-206ENSMUST00000225489 Gpatch8A2A6A1 1505 aa29.21■■■□□ 2.27
3830408C21Rik-206ENSMUST00000225489 Nup160Q9Z0W3 1402 aaKnown RBP29.19■■■□□ 2.26
3830408C21Rik-206ENSMUST00000225489 Setd1bQ8CFT2 1985 aa29.19■■■□□ 2.26
Retrieved 100 of 22,080 RNA–protein pairs in 133.8 ms