RNA–Protein interactions for RNA: ENSMUST00000221654.1

Rnf220-212, Transcript of E3 ubiquitin-protein ligase Rnf220, mousemouse

TSL 1 (best) BASIC

Gene Rnf220, Length 1,949 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220-212ENSMUST00000221654 NischQ80TM9 1593 aa50.59■■■■■ 5.69
Rnf220-212ENSMUST00000221654 Gm35339A0A140LHH9 1649 aa50.29■■■■■ 5.64
Rnf220-212ENSMUST00000221654 Abcc9P70170 1546 aa49.2■■■■■ 5.47
Rnf220-212ENSMUST00000221654 Abcc8B2RUS7 1588 aa48.3■■■■■ 5.32
Rnf220-212ENSMUST00000221654 Rhox8Q6VSS7 320 aa45.82■■■■■ 4.93
Rnf220-212ENSMUST00000221654 ScribQ80U72 1612 aa45.33■■■■■ 4.85
Rnf220-212ENSMUST00000221654 Dcaf1Q80TR8 1506 aa45.1■■■■■ 4.81
Rnf220-212ENSMUST00000221654 Rtl1Q7M732 1744 aa45.06■■■■■ 4.8
Rnf220-212ENSMUST00000221654 Kdm5dQ62240 1548 aa44.33■■■■■ 4.69
Rnf220-212ENSMUST00000221654 Rb1cc1Q9ESK9 1588 aa44.27■■■■■ 4.68
Rnf220-212ENSMUST00000221654 NacadQ5SWP3 1504 aa44.12■■■■■ 4.65
Rnf220-212ENSMUST00000221654 Ccdc180J3QNE4 1664 aa44.04■■■■■ 4.64
Rnf220-212ENSMUST00000221654 Baz1aO88379 1555 aa43.81■■■■■ 4.6
Rnf220-212ENSMUST00000221654 Zcchc6Q5BLK4 1491 aaKnown RBP43.59■■■■■ 4.57
Rnf220-212ENSMUST00000221654 Crybg2B7ZCC2 1516 aa43.28■■■■■ 4.52
Rnf220-212ENSMUST00000221654 Sycp2Q9CUU3 1500 aa43.18■■■■■ 4.5
Rnf220-212ENSMUST00000221654 Smarca2Q6DIC0 1577 aa42.78■■■■■ 4.44
Rnf220-212ENSMUST00000221654 Ccdc136Q3TVA9 1136 aa42.55■■■■■ 4.4
Rnf220-212ENSMUST00000221654 BicraF8VPZ9 1578 aa42.26■■■■■ 4.36
Rnf220-212ENSMUST00000221654 HrcG5E8J6 738 aa41.98■■■■■ 4.31
Rnf220-212ENSMUST00000221654 Trim41Q5NCC3 630 aa41.95■■■■■ 4.31
Rnf220-212ENSMUST00000221654 Cecr2E9Q2Z1 1453 aa41.77■■■■■ 4.28
Rnf220-212ENSMUST00000221654 Brd4Q9ESU6 1400 aaKnown RBP41.66■■■■■ 4.26
Rnf220-212ENSMUST00000221654 Synj1Q8CHC4 1574 aa41.34■■■■■ 4.21
Rnf220-212ENSMUST00000221654 CftrP26361 1476 aa41.19■■■■■ 4.18
Rnf220-212ENSMUST00000221654 Smarca4Q3TKT4 1613 aaKnown RBP41.16■■■■■ 4.18
Rnf220-212ENSMUST00000221654 Cttnbp2B9EJA2 1648 aa41.06■■■■■ 4.16
Rnf220-212ENSMUST00000221654 Golga3P55937 1487 aa41■■■■■ 4.15
Rnf220-212ENSMUST00000221654 Cep164Q5DU05 1446 aa40.99■■■■■ 4.15
Rnf220-212ENSMUST00000221654 Cngb1E1AZ71 1325 aa40.78■■■■■ 4.12
Rnf220-212ENSMUST00000221654 Top2bQ64511 1612 aa40.69■■■■■ 4.1
Rnf220-212ENSMUST00000221654 Rsf1E9PWW9 1441 aaKnown RBP40.68■■■■■ 4.1
Rnf220-212ENSMUST00000221654 Iqgap2Q3UQ44 1575 aa40.64■■■■■ 4.1
Rnf220-212ENSMUST00000221654 Atad2bE9Q166 1460 aaKnown RBP40.64■■■■■ 4.1
Rnf220-212ENSMUST00000221654 Esf1Q3V1V3 845 aaKnown RBP40.56■■■■■ 4.08
Rnf220-212ENSMUST00000221654 Pds5bQ4VA53 1446 aaKnown RBP40.55■■■■■ 4.08
Rnf220-212ENSMUST00000221654 Ccdc88bQ4QRL3 1481 aa40.51■■■■■ 4.07
Rnf220-212ENSMUST00000221654 Chic1Q8CBW7 227 aa40.49■■■■■ 4.07
Rnf220-212ENSMUST00000221654 Cc2d2aQ8CFW7 1633 aa40.18■■■■■ 4.02
Rnf220-212ENSMUST00000221654 Fmn1Q05860 1466 aa40.08■■■■■ 4.01
Rnf220-212ENSMUST00000221654 Wdr62Q3U3T8 1523 aa39.96■■■■□ 3.99
Rnf220-212ENSMUST00000221654 Rpgrip1Q9EPQ2 1331 aa39.94■■■■□ 3.98
Rnf220-212ENSMUST00000221654 Frmpd1A2AKB4 1549 aa39.93■■■■□ 3.98
Rnf220-212ENSMUST00000221654 Gab3Q8BSM5 595 aa39.85■■■■□ 3.97
Rnf220-212ENSMUST00000221654 Top2aQ01320 1528 aaKnown RBP39.79■■■■□ 3.96
Rnf220-212ENSMUST00000221654 Ehmt2Q9Z148 1263 aaKnown RBP39.77■■■■□ 3.96
Rnf220-212ENSMUST00000221654 Ercc6F8VPZ5 1481 aa39.76■■■■□ 3.95
Rnf220-212ENSMUST00000221654 Acin1Q9JIX8 1338 aaKnown RBP39.73■■■■□ 3.95
Rnf220-212ENSMUST00000221654 TnnQ80Z71 1560 aa39.7■■■■□ 3.95
Rnf220-212ENSMUST00000221654 Rapgef2Q8CHG7 1496 aa39.51■■■■□ 3.92
Rnf220-212ENSMUST00000221654 Lamc3Q9R0B6 1581 aa39.48■■■■□ 3.91
Rnf220-212ENSMUST00000221654 Unc13aQ4KUS2 1712 aa39.48■■■■□ 3.91
Rnf220-212ENSMUST00000221654 Thoc2B1AZI6 1594 aaKnown RBP39.43■■■■□ 3.9
Rnf220-212ENSMUST00000221654 Kif15Q6P9L6 1387 aa39.19■■■■□ 3.86
Rnf220-212ENSMUST00000221654 Phldb1Q6PDH0 1371 aaKnown RBP39.15■■■■□ 3.86
Rnf220-212ENSMUST00000221654 Cep162Q6ZQ06 1403 aa39.14■■■■□ 3.86
Rnf220-212ENSMUST00000221654 Eif4g1Q6NZJ6 1600 aaKnown RBP39.03■■■■□ 3.84
Rnf220-212ENSMUST00000221654 Camsap1A2AHC3 1581 aa39.02■■■■□ 3.84
Rnf220-212ENSMUST00000221654 Fam135aQ6NS59 1506 aa38.97■■■■□ 3.83
Rnf220-212ENSMUST00000221654 NrkQ9R0G8 1455 aa38.85■■■■□ 3.81
Rnf220-212ENSMUST00000221654 Ccdc18Q640L5 1455 aa38.84■■■■□ 3.81
Rnf220-212ENSMUST00000221654 Npm2Q80W85 207 aa38.83■■■■□ 3.81
Rnf220-212ENSMUST00000221654 PtprkP35822 1457 aa38.78■■■■□ 3.8
Rnf220-212ENSMUST00000221654 Shroom4Q1W617 1475 aa38.74■■■■□ 3.79
Rnf220-212ENSMUST00000221654 Grin2bQ01097 1482 aa38.7■■■■□ 3.79
Rnf220-212ENSMUST00000221654 Ubl4bQ9CQ84 188 aa38.69■■■■□ 3.78
Rnf220-212ENSMUST00000221654 Arhgap35Q91YM2 1499 aa38.69■■■■□ 3.78
Rnf220-212ENSMUST00000221654 Il27Q8K3I6 234 aa38.69■■■■□ 3.78
Rnf220-212ENSMUST00000221654 Cux2P70298 1426 aa38.69■■■■□ 3.78
Rnf220-212ENSMUST00000221654 Myt1lP97500 1187 aa38.62■■■■□ 3.77
Rnf220-212ENSMUST00000221654 Map3k1P53349 1493 aa38.53■■■■□ 3.76
Rnf220-212ENSMUST00000221654 Baz1bQ9Z277 1479 aa38.46■■■■□ 3.75
Rnf220-212ENSMUST00000221654 Npm1Q61937 292 aaKnown RBP38.39■■■■□ 3.74
Rnf220-212ENSMUST00000221654 Clip1Q922J3 1391 aa38.35■■■■□ 3.73
Rnf220-212ENSMUST00000221654 LrpprcQ6PB66 1392 aaKnown RBP38.34■■■■□ 3.73
Rnf220-212ENSMUST00000221654 Mroh2bQ7M6Y6 1581 aa38.34■■■■□ 3.73
Rnf220-212ENSMUST00000221654 Efcab5A0JP43 1406 aa38.31■■■■□ 3.72
Rnf220-212ENSMUST00000221654 PogzQ8BZH4 1409 aaKnown RBP38.3■■■■□ 3.72
Rnf220-212ENSMUST00000221654 Mier1Q5UAK0 511 aa38.24■■■■□ 3.71
Rnf220-212ENSMUST00000221654 AqrQ8CFQ3 1481 aaKnown RBP38.2■■■■□ 3.71
Rnf220-212ENSMUST00000221654 Eea1Q8BL66 1411 aa38.18■■■■□ 3.7
Rnf220-212ENSMUST00000221654 Duox2A2AQ99 1517 aa38.18■■■■□ 3.7
Rnf220-212ENSMUST00000221654 Arap1Q4LDD4 1452 aa38.08■■■■□ 3.69
Rnf220-212ENSMUST00000221654 Mrc2Q64449 1479 aa38.07■■■■□ 3.69
Rnf220-212ENSMUST00000221654 UbtfP25976 765 aaKnown RBP38.04■■■■□ 3.68
Rnf220-212ENSMUST00000221654 Zeb1Q64318 1117 aa38.04■■■■□ 3.68
Rnf220-212ENSMUST00000221654 Dhx29Q6PGC1 1365 aaKnown RBP38.03■■■■□ 3.68
Rnf220-212ENSMUST00000221654 NefmP08553 848 aa38■■■■□ 3.67
Rnf220-212ENSMUST00000221654 Arhgef5E9Q7D5 1581 aa37.99■■■■□ 3.67
Rnf220-212ENSMUST00000221654 Setd5Q5XJV7 1441 aa37.99■■■■□ 3.67
Rnf220-212ENSMUST00000221654 Erich3F6QRE9 1637 aa37.98■■■■□ 3.67
Rnf220-212ENSMUST00000221654 Dnajc5bQ9CQ94 199 aa37.96■■■■□ 3.67
Rnf220-212ENSMUST00000221654 Carmil1Q6EDY6 1374 aa37.94■■■■□ 3.66
Rnf220-212ENSMUST00000221654 Ankrd26Q811D2 1581 aa37.94■■■■□ 3.66
Rnf220-212ENSMUST00000221654 Samd9lQ69Z37 1561 aa37.93■■■■□ 3.66
Rnf220-212ENSMUST00000221654 Kif21aQ9QXL2 1672 aa37.91■■■■□ 3.66
Rnf220-212ENSMUST00000221654 Plekhg3Q4VAC9 1341 aa37.88■■■■□ 3.66
Rnf220-212ENSMUST00000221654 SynmQ70IV5 1561 aa37.88■■■■□ 3.65
Rnf220-212ENSMUST00000221654 Crocc2F6XLV1 1638 aa37.86■■■■□ 3.65
Rnf220-212ENSMUST00000221654 Tiam1Q60610 1591 aa37.76■■■■□ 3.64
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms