RNA–Protein interactions for RNA: ENSMUST00000216152.1

R3hcc1-206, Transcript of R3H and coiled-coil domain-containing protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene R3hcc1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1-206ENSMUST00000216152 Gm35339A0A140LHH9 1649 aa29.58■■■□□ 2.33
R3hcc1-206ENSMUST00000216152 NischQ80TM9 1593 aa29.42■■■□□ 2.3
R3hcc1-206ENSMUST00000216152 Abcc9P70170 1546 aa28.58■■■□□ 2.17
R3hcc1-206ENSMUST00000216152 Abcc8B2RUS7 1588 aa28.19■■■□□ 2.1
R3hcc1-206ENSMUST00000216152 ScribQ80U72 1612 aa26.78■■□□□ 1.88
R3hcc1-206ENSMUST00000216152 Dcaf1Q80TR8 1506 aa26.23■■□□□ 1.79
R3hcc1-206ENSMUST00000216152 Kdm5dQ62240 1548 aa26.07■■□□□ 1.76
R3hcc1-206ENSMUST00000216152 Rhox8Q6VSS7 320 aa26.04■■□□□ 1.76
R3hcc1-206ENSMUST00000216152 NacadQ5SWP3 1504 aa26.03■■□□□ 1.76
R3hcc1-206ENSMUST00000216152 Rb1cc1Q9ESK9 1588 aa25.75■■□□□ 1.71
R3hcc1-206ENSMUST00000216152 Ccdc180J3QNE4 1664 aa25.65■■□□□ 1.7
R3hcc1-206ENSMUST00000216152 Sycp2Q9CUU3 1500 aa25.47■■□□□ 1.67
R3hcc1-206ENSMUST00000216152 Baz1aO88379 1555 aa25.43■■□□□ 1.66
R3hcc1-206ENSMUST00000216152 Rtl1Q7M732 1744 aa25.29■■□□□ 1.64
R3hcc1-206ENSMUST00000216152 Crybg2B7ZCC2 1516 aa25.17■■□□□ 1.62
R3hcc1-206ENSMUST00000216152 BicraF8VPZ9 1578 aa24.98■■□□□ 1.59
R3hcc1-206ENSMUST00000216152 Zcchc6Q5BLK4 1491 aaKnown RBP24.87■■□□□ 1.57
R3hcc1-206ENSMUST00000216152 Smarca2Q6DIC0 1577 aa24.76■■□□□ 1.55
R3hcc1-206ENSMUST00000216152 Cecr2E9Q2Z1 1453 aa24.25■■□□□ 1.47
R3hcc1-206ENSMUST00000216152 Smarca4Q3TKT4 1613 aaKnown RBP24.22■■□□□ 1.47
R3hcc1-206ENSMUST00000216152 Ccdc136Q3TVA9 1136 aa24.19■■□□□ 1.46
R3hcc1-206ENSMUST00000216152 Pds5bQ4VA53 1446 aaKnown RBP24.14■■□□□ 1.45
R3hcc1-206ENSMUST00000216152 Brd4Q9ESU6 1400 aaKnown RBP24.08■■□□□ 1.44
R3hcc1-206ENSMUST00000216152 Atad2bE9Q166 1460 aaKnown RBP24.05■■□□□ 1.44
R3hcc1-206ENSMUST00000216152 Iqgap2Q3UQ44 1575 aa23.97■■□□□ 1.43
R3hcc1-206ENSMUST00000216152 Cttnbp2B9EJA2 1648 aa23.97■■□□□ 1.43
R3hcc1-206ENSMUST00000216152 Synj1Q8CHC4 1574 aa23.96■■□□□ 1.43
R3hcc1-206ENSMUST00000216152 Trim41Q5NCC3 630 aa23.94■■□□□ 1.42
R3hcc1-206ENSMUST00000216152 CftrP26361 1476 aa23.88■■□□□ 1.41
R3hcc1-206ENSMUST00000216152 Dnajc5bQ9CQ94 199 aa23.76■■□□□ 1.39
R3hcc1-206ENSMUST00000216152 Ercc6F8VPZ5 1481 aa23.72■■□□□ 1.39
R3hcc1-206ENSMUST00000216152 Thoc2B1AZI6 1594 aaKnown RBP23.71■■□□□ 1.39
R3hcc1-206ENSMUST00000216152 Wdr62Q3U3T8 1523 aa23.64■■□□□ 1.37
R3hcc1-206ENSMUST00000216152 Frmpd1A2AKB4 1549 aa23.55■■□□□ 1.36
R3hcc1-206ENSMUST00000216152 Esf1Q3V1V3 845 aaKnown RBP23.48■■□□□ 1.35
R3hcc1-206ENSMUST00000216152 Golga3P55937 1487 aa23.48■■□□□ 1.35
R3hcc1-206ENSMUST00000216152 Top2bQ64511 1612 aa23.43■■□□□ 1.34
R3hcc1-206ENSMUST00000216152 Unc13aQ4KUS2 1712 aa23.4■■□□□ 1.34
R3hcc1-206ENSMUST00000216152 Cc2d2aQ8CFW7 1633 aa23.35■■□□□ 1.33
R3hcc1-206ENSMUST00000216152 Fam135aQ6NS59 1506 aa23.32■■□□□ 1.32
R3hcc1-206ENSMUST00000216152 Cngb1E1AZ71 1325 aa23.32■■□□□ 1.32
R3hcc1-206ENSMUST00000216152 HrcG5E8J6 738 aa23.24■■□□□ 1.31
R3hcc1-206ENSMUST00000216152 Phldb1Q6PDH0 1371 aaKnown RBP23.23■■□□□ 1.31
R3hcc1-206ENSMUST00000216152 Baz1bQ9Z277 1479 aa23.11■■□□□ 1.29
R3hcc1-206ENSMUST00000216152 Fmn1Q05860 1466 aa23.1■■□□□ 1.29
R3hcc1-206ENSMUST00000216152 Rsf1E9PWW9 1441 aaKnown RBP23.08■■□□□ 1.29
R3hcc1-206ENSMUST00000216152 TnnQ80Z71 1560 aa23.08■■□□□ 1.28
R3hcc1-206ENSMUST00000216152 Lamc3Q9R0B6 1581 aa23.08■■□□□ 1.28
R3hcc1-206ENSMUST00000216152 Ccdc88bQ4QRL3 1481 aa22.98■■□□□ 1.27
R3hcc1-206ENSMUST00000216152 Cep164Q5DU05 1446 aa22.97■■□□□ 1.27
R3hcc1-206ENSMUST00000216152 Kif15Q6P9L6 1387 aa22.94■■□□□ 1.26
R3hcc1-206ENSMUST00000216152 Ubl4bQ9CQ84 188 aa22.92■■□□□ 1.26
R3hcc1-206ENSMUST00000216152 Top2aQ01320 1528 aaKnown RBP22.82■■□□□ 1.24
R3hcc1-206ENSMUST00000216152 Chic1Q8CBW7 227 aa22.82■■□□□ 1.24
R3hcc1-206ENSMUST00000216152 Camsap1A2AHC3 1581 aa22.76■■□□□ 1.23
R3hcc1-206ENSMUST00000216152 Cux2P70298 1426 aa22.75■■□□□ 1.23
R3hcc1-206ENSMUST00000216152 Mrc2Q64449 1479 aa22.75■■□□□ 1.23
R3hcc1-206ENSMUST00000216152 Ccdc18Q640L5 1455 aa22.74■■□□□ 1.23
R3hcc1-206ENSMUST00000216152 Npm1Q61937 292 aaKnown RBP22.54■■□□□ 1.2
R3hcc1-206ENSMUST00000216152 Kif21aQ9QXL2 1672 aa22.53■■□□□ 1.2
R3hcc1-206ENSMUST00000216152 Il27Q8K3I6 234 aa22.51■■□□□ 1.19
R3hcc1-206ENSMUST00000216152 Grin2bQ01097 1482 aa22.48■■□□□ 1.19
R3hcc1-206ENSMUST00000216152 Gab3Q8BSM5 595 aa22.43■■□□□ 1.18
R3hcc1-206ENSMUST00000216152 NrkQ9R0G8 1455 aa22.42■■□□□ 1.18
R3hcc1-206ENSMUST00000216152 LrpprcQ6PB66 1392 aaKnown RBP22.42■■□□□ 1.18
R3hcc1-206ENSMUST00000216152 Rapgef2Q8CHG7 1496 aa22.39■■□□□ 1.18
R3hcc1-206ENSMUST00000216152 PogzQ8BZH4 1409 aaKnown RBP22.37■■□□□ 1.17
R3hcc1-206ENSMUST00000216152 Shroom4Q1W617 1475 aa22.36■■□□□ 1.17
R3hcc1-206ENSMUST00000216152 Crocc2F6XLV1 1638 aa22.35■■□□□ 1.17
R3hcc1-206ENSMUST00000216152 Dhx29Q6PGC1 1365 aaKnown RBP22.32■■□□□ 1.16
R3hcc1-206ENSMUST00000216152 Duox2A2AQ99 1517 aa22.28■■□□□ 1.16
R3hcc1-206ENSMUST00000216152 Lrriq1Q0P5X1 1673 aa22.27■■□□□ 1.15
R3hcc1-206ENSMUST00000216152 PtprkP35822 1457 aa22.26■■□□□ 1.15
R3hcc1-206ENSMUST00000216152 Efcab5A0JP43 1406 aa22.25■■□□□ 1.15
R3hcc1-206ENSMUST00000216152 Eif4g1Q6NZJ6 1600 aaKnown RBP22.24■■□□□ 1.15
R3hcc1-206ENSMUST00000216152 Npm2Q80W85 207 aa22.23■■□□□ 1.15
R3hcc1-206ENSMUST00000216152 Cep162Q6ZQ06 1403 aa22.19■■□□□ 1.14
R3hcc1-206ENSMUST00000216152 Samd9lQ69Z37 1561 aa22.18■■□□□ 1.14
R3hcc1-206ENSMUST00000216152 Urb2E9Q7L1 1524 aaKnown RBP22.12■■□□□ 1.13
R3hcc1-206ENSMUST00000216152 Map3k1P53349 1493 aa22.12■■□□□ 1.13
R3hcc1-206ENSMUST00000216152 Plb1Q3TTY0 1478 aa22.1■■□□□ 1.13
R3hcc1-206ENSMUST00000216152 Arhgap35Q91YM2 1499 aa22.1■■□□□ 1.13
R3hcc1-206ENSMUST00000216152 Mroh2bQ7M6Y6 1581 aa22.07■■□□□ 1.12
R3hcc1-206ENSMUST00000216152 SynmQ70IV5 1561 aa22.06■■□□□ 1.12
R3hcc1-206ENSMUST00000216152 Pbrm1Q8BSQ9 1634 aaKnown RBP22.05■■□□□ 1.12
R3hcc1-206ENSMUST00000216152 Ift140E9PY46 1464 aa22.02■■□□□ 1.12
R3hcc1-206ENSMUST00000216152 Zeb1Q64318 1117 aa22.01■■□□□ 1.11
R3hcc1-206ENSMUST00000216152 AqrQ8CFQ3 1481 aaKnown RBP22.01■■□□□ 1.11
R3hcc1-206ENSMUST00000216152 Eif4g3Q80XI3 1579 aaKnown RBP21.98■■□□□ 1.11
R3hcc1-206ENSMUST00000216152 Rad54l2Q99NG0 1466 aa21.93■■□□□ 1.1
R3hcc1-206ENSMUST00000216152 Myt1lP97500 1187 aa21.93■■□□□ 1.1
R3hcc1-206ENSMUST00000216152 Setd1bQ8CFT2 1985 aa21.91■■□□□ 1.1
R3hcc1-206ENSMUST00000216152 Gpatch8A2A6A1 1505 aa21.91■■□□□ 1.1
R3hcc1-206ENSMUST00000216152 Disp1Q3TDN0 1521 aa21.91■■□□□ 1.1
R3hcc1-206ENSMUST00000216152 Magi3Q9EQJ9 1476 aa21.89■■□□□ 1.1
R3hcc1-206ENSMUST00000216152 Carmil1Q6EDY6 1374 aa21.88■■□□□ 1.09
R3hcc1-206ENSMUST00000216152 Clip1Q922J3 1391 aa21.88■■□□□ 1.09
R3hcc1-206ENSMUST00000216152 Grin2aP35436 1464 aa21.88■■□□□ 1.09
R3hcc1-206ENSMUST00000216152 Pla2r1Q62028 1487 aa21.86■■□□□ 1.09
R3hcc1-206ENSMUST00000216152 Polr1aO35134 1717 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 96.9 ms