RNA–Protein interactions for RNA: ENSMUST00000213324.1

Scg3-202, Transcript of Secretogranin-3, mousemouse

TSL 1 (best) BASIC

Gene Scg3, Length 2,152 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scg3-202ENSMUST00000213324 NischQ80TM9 1593 aa26.95■■□□□ 1.9
Scg3-202ENSMUST00000213324 Gm35339A0A140LHH9 1649 aa26.8■■□□□ 1.88
Scg3-202ENSMUST00000213324 Abcc9P70170 1546 aa26.2■■□□□ 1.78
Scg3-202ENSMUST00000213324 Abcc8B2RUS7 1588 aa25.71■■□□□ 1.71
Scg3-202ENSMUST00000213324 Rhox8Q6VSS7 320 aa24.43■■□□□ 1.5
Scg3-202ENSMUST00000213324 ScribQ80U72 1612 aa24.12■■□□□ 1.45
Scg3-202ENSMUST00000213324 Rtl1Q7M732 1744 aa24.11■■□□□ 1.45
Scg3-202ENSMUST00000213324 Dcaf1Q80TR8 1506 aa24.03■■□□□ 1.44
Scg3-202ENSMUST00000213324 Rb1cc1Q9ESK9 1588 aa23.59■■□□□ 1.37
Scg3-202ENSMUST00000213324 Kdm5dQ62240 1548 aa23.59■■□□□ 1.37
Scg3-202ENSMUST00000213324 Ccdc180J3QNE4 1664 aa23.52■■□□□ 1.36
Scg3-202ENSMUST00000213324 NacadQ5SWP3 1504 aa23.5■■□□□ 1.35
Scg3-202ENSMUST00000213324 Baz1aO88379 1555 aa23.34■■□□□ 1.33
Scg3-202ENSMUST00000213324 Zcchc6Q5BLK4 1491 aaKnown RBP23.19■■□□□ 1.3
Scg3-202ENSMUST00000213324 Crybg2B7ZCC2 1516 aa23.07■■□□□ 1.28
Scg3-202ENSMUST00000213324 Sycp2Q9CUU3 1500 aa22.99■■□□□ 1.27
Scg3-202ENSMUST00000213324 Smarca2Q6DIC0 1577 aa22.78■■□□□ 1.24
Scg3-202ENSMUST00000213324 Ccdc136Q3TVA9 1136 aa22.66■■□□□ 1.22
Scg3-202ENSMUST00000213324 BicraF8VPZ9 1578 aa22.48■■□□□ 1.19
Scg3-202ENSMUST00000213324 HrcG5E8J6 738 aa22.39■■□□□ 1.18
Scg3-202ENSMUST00000213324 Trim41Q5NCC3 630 aa22.39■■□□□ 1.17
Scg3-202ENSMUST00000213324 Cecr2E9Q2Z1 1453 aa22.21■■□□□ 1.15
Scg3-202ENSMUST00000213324 Brd4Q9ESU6 1400 aaKnown RBP22.21■■□□□ 1.15
Scg3-202ENSMUST00000213324 Synj1Q8CHC4 1574 aa22.01■■□□□ 1.11
Scg3-202ENSMUST00000213324 Smarca4Q3TKT4 1613 aaKnown RBP21.93■■□□□ 1.1
Scg3-202ENSMUST00000213324 CftrP26361 1476 aa21.93■■□□□ 1.1
Scg3-202ENSMUST00000213324 Cttnbp2B9EJA2 1648 aa21.9■■□□□ 1.1
Scg3-202ENSMUST00000213324 Cep164Q5DU05 1446 aa21.85■■□□□ 1.09
Scg3-202ENSMUST00000213324 Golga3P55937 1487 aa21.84■■□□□ 1.09
Scg3-202ENSMUST00000213324 Cngb1E1AZ71 1325 aa21.75■■□□□ 1.07
Scg3-202ENSMUST00000213324 Top2bQ64511 1612 aa21.69■■□□□ 1.06
Scg3-202ENSMUST00000213324 Iqgap2Q3UQ44 1575 aa21.65■■□□□ 1.06
Scg3-202ENSMUST00000213324 Atad2bE9Q166 1460 aaKnown RBP21.64■■□□□ 1.06
Scg3-202ENSMUST00000213324 Rsf1E9PWW9 1441 aaKnown RBP21.64■■□□□ 1.05
Scg3-202ENSMUST00000213324 Esf1Q3V1V3 845 aaKnown RBP21.64■■□□□ 1.05
Scg3-202ENSMUST00000213324 Pds5bQ4VA53 1446 aaKnown RBP21.6■■□□□ 1.05
Scg3-202ENSMUST00000213324 Ccdc88bQ4QRL3 1481 aa21.55■■□□□ 1.04
Scg3-202ENSMUST00000213324 Chic1Q8CBW7 227 aa21.54■■□□□ 1.04
Scg3-202ENSMUST00000213324 Cc2d2aQ8CFW7 1633 aa21.42■■□□□ 1.02
Scg3-202ENSMUST00000213324 Rpgrip1Q9EPQ2 1331 aa21.38■■□□□ 1.01
Scg3-202ENSMUST00000213324 Fmn1Q05860 1466 aa21.36■■□□□ 1.01
Scg3-202ENSMUST00000213324 Wdr62Q3U3T8 1523 aa21.28■■□□□ 1
Scg3-202ENSMUST00000213324 Frmpd1A2AKB4 1549 aa21.25■□□□□ 0.99
Scg3-202ENSMUST00000213324 Gab3Q8BSM5 595 aa21.24■□□□□ 0.99
Scg3-202ENSMUST00000213324 Ercc6F8VPZ5 1481 aa21.2■□□□□ 0.98
Scg3-202ENSMUST00000213324 Acin1Q9JIX8 1338 aaKnown RBP21.19■□□□□ 0.98
Scg3-202ENSMUST00000213324 Top2aQ01320 1528 aaKnown RBP21.19■□□□□ 0.98
Scg3-202ENSMUST00000213324 Ehmt2Q9Z148 1263 aaKnown RBP21.17■□□□□ 0.98
Scg3-202ENSMUST00000213324 TnnQ80Z71 1560 aa21.15■□□□□ 0.98
Scg3-202ENSMUST00000213324 Unc13aQ4KUS2 1712 aa21.05■□□□□ 0.96
Scg3-202ENSMUST00000213324 Rapgef2Q8CHG7 1496 aa21.04■□□□□ 0.96
Scg3-202ENSMUST00000213324 Lamc3Q9R0B6 1581 aa21.03■□□□□ 0.96
Scg3-202ENSMUST00000213324 Thoc2B1AZI6 1594 aaKnown RBP20.99■□□□□ 0.95
Scg3-202ENSMUST00000213324 Kif15Q6P9L6 1387 aa20.87■□□□□ 0.93
Scg3-202ENSMUST00000213324 Phldb1Q6PDH0 1371 aaKnown RBP20.85■□□□□ 0.93
Scg3-202ENSMUST00000213324 Cep162Q6ZQ06 1403 aa20.85■□□□□ 0.93
Scg3-202ENSMUST00000213324 Camsap1A2AHC3 1581 aa20.79■□□□□ 0.92
Scg3-202ENSMUST00000213324 Eif4g1Q6NZJ6 1600 aaKnown RBP20.79■□□□□ 0.92
Scg3-202ENSMUST00000213324 Fam135aQ6NS59 1506 aa20.75■□□□□ 0.91
Scg3-202ENSMUST00000213324 Npm2Q80W85 207 aa20.72■□□□□ 0.91
Scg3-202ENSMUST00000213324 Ccdc18Q640L5 1455 aa20.71■□□□□ 0.91
Scg3-202ENSMUST00000213324 NrkQ9R0G8 1455 aa20.68■□□□□ 0.9
Scg3-202ENSMUST00000213324 Shroom4Q1W617 1475 aa20.64■□□□□ 0.9
Scg3-202ENSMUST00000213324 PtprkP35822 1457 aa20.62■□□□□ 0.89
Scg3-202ENSMUST00000213324 Ubl4bQ9CQ84 188 aa20.62■□□□□ 0.89
Scg3-202ENSMUST00000213324 Il27Q8K3I6 234 aa20.61■□□□□ 0.89
Scg3-202ENSMUST00000213324 Grin2bQ01097 1482 aa20.61■□□□□ 0.89
Scg3-202ENSMUST00000213324 Arhgap35Q91YM2 1499 aa20.6■□□□□ 0.89
Scg3-202ENSMUST00000213324 Cux2P70298 1426 aa20.6■□□□□ 0.89
Scg3-202ENSMUST00000213324 Myt1lP97500 1187 aa20.59■□□□□ 0.89
Scg3-202ENSMUST00000213324 Map3k1P53349 1493 aa20.53■□□□□ 0.88
Scg3-202ENSMUST00000213324 Baz1bQ9Z277 1479 aa20.52■□□□□ 0.88
Scg3-202ENSMUST00000213324 Npm1Q61937 292 aaKnown RBP20.47■□□□□ 0.87
Scg3-202ENSMUST00000213324 Clip1Q922J3 1391 aa20.44■□□□□ 0.86
Scg3-202ENSMUST00000213324 Mroh2bQ7M6Y6 1581 aa20.42■□□□□ 0.86
Scg3-202ENSMUST00000213324 LrpprcQ6PB66 1392 aaKnown RBP20.42■□□□□ 0.86
Scg3-202ENSMUST00000213324 Efcab5A0JP43 1406 aa20.41■□□□□ 0.86
Scg3-202ENSMUST00000213324 PogzQ8BZH4 1409 aaKnown RBP20.39■□□□□ 0.85
Scg3-202ENSMUST00000213324 Mier1Q5UAK0 511 aa20.38■□□□□ 0.85
Scg3-202ENSMUST00000213324 AqrQ8CFQ3 1481 aaKnown RBP20.37■□□□□ 0.85
Scg3-202ENSMUST00000213324 Eea1Q8BL66 1411 aa20.36■□□□□ 0.85
Scg3-202ENSMUST00000213324 Duox2A2AQ99 1517 aa20.33■□□□□ 0.85
Scg3-202ENSMUST00000213324 NefmP08553 848 aa20.31■□□□□ 0.84
Scg3-202ENSMUST00000213324 Zeb1Q64318 1117 aa20.3■□□□□ 0.84
Scg3-202ENSMUST00000213324 UbtfP25976 765 aaKnown RBP20.28■□□□□ 0.84
Scg3-202ENSMUST00000213324 Mrc2Q64449 1479 aa20.27■□□□□ 0.84
Scg3-202ENSMUST00000213324 Arap1Q4LDD4 1452 aa20.27■□□□□ 0.84
Scg3-202ENSMUST00000213324 Erich3F6QRE9 1637 aa20.26■□□□□ 0.83
Scg3-202ENSMUST00000213324 Setd5Q5XJV7 1441 aa20.25■□□□□ 0.83
Scg3-202ENSMUST00000213324 Arhgef5E9Q7D5 1581 aa20.24■□□□□ 0.83
Scg3-202ENSMUST00000213324 Dhx29Q6PGC1 1365 aaKnown RBP20.24■□□□□ 0.83
Scg3-202ENSMUST00000213324 Carmil1Q6EDY6 1374 aa20.22■□□□□ 0.83
Scg3-202ENSMUST00000213324 Ankrd26Q811D2 1581 aa20.21■□□□□ 0.83
Scg3-202ENSMUST00000213324 Kif21aQ9QXL2 1672 aa20.2■□□□□ 0.82
Scg3-202ENSMUST00000213324 Samd9lQ69Z37 1561 aa20.19■□□□□ 0.82
Scg3-202ENSMUST00000213324 SynmQ70IV5 1561 aa20.19■□□□□ 0.82
Scg3-202ENSMUST00000213324 Crocc2F6XLV1 1638 aa20.19■□□□□ 0.82
Scg3-202ENSMUST00000213324 Plekhg3Q4VAC9 1341 aa20.18■□□□□ 0.82
Scg3-202ENSMUST00000213324 Tiam1Q60610 1591 aa20.13■□□□□ 0.81
Scg3-202ENSMUST00000213324 Dnajc5bQ9CQ94 199 aa20.13■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms