RNA–Protein interactions for RNA: ENSMUST00000211235.1

Nup98-206, Transcript of Nuclear pore complex protein Nup98-Nup96, mousemouse

TSL 5 BASIC

Gene Nup98, Length 3,748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98-206ENSMUST00000211235 NischQ80TM9 1593 aa25.2■■□□□ 1.62
Nup98-206ENSMUST00000211235 Abcc9P70170 1546 aa24.47■■□□□ 1.51
Nup98-206ENSMUST00000211235 Gm35339A0A140LHH9 1649 aa24.41■■□□□ 1.5
Nup98-206ENSMUST00000211235 Rhox8Q6VSS7 320 aa23.92■■□□□ 1.42
Nup98-206ENSMUST00000211235 Abcc8B2RUS7 1588 aa23.82■■□□□ 1.4
Nup98-206ENSMUST00000211235 Rtl1Q7M732 1744 aa23.65■■□□□ 1.38
Nup98-206ENSMUST00000211235 Ccdc180J3QNE4 1664 aa23.45■■□□□ 1.34
Nup98-206ENSMUST00000211235 Rpgrip1Q9EPQ2 1331 aa23.07■■□□□ 1.28
Nup98-206ENSMUST00000211235 Zcchc6Q5BLK4 1491 aaKnown RBP23.05■■□□□ 1.28
Nup98-206ENSMUST00000211235 Acin1Q9JIX8 1338 aaKnown RBP22.74■■□□□ 1.23
Nup98-206ENSMUST00000211235 Ehmt2Q9Z148 1263 aaKnown RBP22.6■■□□□ 1.21
Nup98-206ENSMUST00000211235 HrcG5E8J6 738 aa22.4■■□□□ 1.18
Nup98-206ENSMUST00000211235 Dcaf1Q80TR8 1506 aa22.34■■□□□ 1.17
Nup98-206ENSMUST00000211235 Ccdc136Q3TVA9 1136 aa22.24■■□□□ 1.15
Nup98-206ENSMUST00000211235 Pcgf6Q99NA9 353 aa22.19■■□□□ 1.14
Nup98-206ENSMUST00000211235 Rb1cc1Q9ESK9 1588 aa22.09■■□□□ 1.13
Nup98-206ENSMUST00000211235 ScribQ80U72 1612 aa22.01■■□□□ 1.11
Nup98-206ENSMUST00000211235 Trim41Q5NCC3 630 aa21.89■■□□□ 1.1
Nup98-206ENSMUST00000211235 Baz1aO88379 1555 aa21.82■■□□□ 1.08
Nup98-206ENSMUST00000211235 Supt5hO55201 1082 aaKnown RBP21.73■■□□□ 1.07
Nup98-206ENSMUST00000211235 Kdm5dQ62240 1548 aa21.68■■□□□ 1.06
Nup98-206ENSMUST00000211235 Cep164Q5DU05 1446 aa21.6■■□□□ 1.05
Nup98-206ENSMUST00000211235 Smarca2Q6DIC0 1577 aa21.41■■□□□ 1.02
Nup98-206ENSMUST00000211235 Neurod1Q60867 357 aa21.39■■□□□ 1.01
Nup98-206ENSMUST00000211235 Chic1Q8CBW7 227 aa21.33■■□□□ 1.01
Nup98-206ENSMUST00000211235 NacadQ5SWP3 1504 aa21.33■■□□□ 1.01
Nup98-206ENSMUST00000211235 Rsf1E9PWW9 1441 aaKnown RBP21.29■■□□□ 1
Nup98-206ENSMUST00000211235 Crybg2B7ZCC2 1516 aa21.24■□□□□ 0.99
Nup98-206ENSMUST00000211235 Gab3Q8BSM5 595 aa21.21■□□□□ 0.99
Nup98-206ENSMUST00000211235 Zeb1Q64318 1117 aa21.21■□□□□ 0.99
Nup98-206ENSMUST00000211235 Mier1Q5UAK0 511 aa21.13■□□□□ 0.97
Nup98-206ENSMUST00000211235 Cngb1E1AZ71 1325 aa21.12■□□□□ 0.97
Nup98-206ENSMUST00000211235 Ccdc88bQ4QRL3 1481 aa21.09■□□□□ 0.97
Nup98-206ENSMUST00000211235 Sall2Q9QX96 1004 aa21.05■□□□□ 0.96
Nup98-206ENSMUST00000211235 NefmP08553 848 aa21.01■□□□□ 0.95
Nup98-206ENSMUST00000211235 Cecr2E9Q2Z1 1453 aa20.93■□□□□ 0.94
Nup98-206ENSMUST00000211235 Sycp2Q9CUU3 1500 aa20.91■□□□□ 0.94
Nup98-206ENSMUST00000211235 Golga3P55937 1487 aa20.88■□□□□ 0.93
Nup98-206ENSMUST00000211235 Brd4Q9ESU6 1400 aaKnown RBP20.87■□□□□ 0.93
Nup98-206ENSMUST00000211235 Synj1Q8CHC4 1574 aa20.77■□□□□ 0.92
Nup98-206ENSMUST00000211235 1700123L14RikQ3V2K7 440 aa20.71■□□□□ 0.91
Nup98-206ENSMUST00000211235 Aebp2Q9Z248 504 aaKnown RBP20.71■□□□□ 0.91
Nup98-206ENSMUST00000211235 Anks4bQ8K3X6 423 aa20.71■□□□□ 0.91
Nup98-206ENSMUST00000211235 Csrnp3P59055 597 aa20.68■□□□□ 0.9
Nup98-206ENSMUST00000211235 Las1lA2BE28 776 aaKnown RBP20.66■□□□□ 0.9
Nup98-206ENSMUST00000211235 UbtfP25976 765 aaKnown RBP20.61■□□□□ 0.89
Nup98-206ENSMUST00000211235 CftrP26361 1476 aa20.57■□□□□ 0.88
Nup98-206ENSMUST00000211235 Top2bQ64511 1612 aa20.56■□□□□ 0.88
Nup98-206ENSMUST00000211235 Esf1Q3V1V3 845 aaKnown RBP20.52■□□□□ 0.88
Nup98-206ENSMUST00000211235 Wdr66E9Q743 1299 aa20.52■□□□□ 0.87
Nup98-206ENSMUST00000211235 Ppargc1bQ8VHJ7 1014 aa20.5■□□□□ 0.87
Nup98-206ENSMUST00000211235 BicraF8VPZ9 1578 aa20.48■□□□□ 0.87
Nup98-206ENSMUST00000211235 Rapgef2Q8CHG7 1496 aa20.45■□□□□ 0.86
Nup98-206ENSMUST00000211235 Cc2d2aQ8CFW7 1633 aa20.4■□□□□ 0.86
Nup98-206ENSMUST00000211235 ClspnQ80YR7 1315 aa20.4■□□□□ 0.86
Nup98-206ENSMUST00000211235 Cdk11bP24788 784 aaKnown RBP20.38■□□□□ 0.85
Nup98-206ENSMUST00000211235 Nop58Q6DFW4 536 aaKnown RBP20.37■□□□□ 0.85
Nup98-206ENSMUST00000211235 Cttnbp2B9EJA2 1648 aa20.3■□□□□ 0.84
Nup98-206ENSMUST00000211235 Cep162Q6ZQ06 1403 aa20.29■□□□□ 0.84
Nup98-206ENSMUST00000211235 Myt1lP97500 1187 aa20.27■□□□□ 0.83
Nup98-206ENSMUST00000211235 Top2aQ01320 1528 aaKnown RBP20.24■□□□□ 0.83
Nup98-206ENSMUST00000211235 Aplp2Q06335 707 aa20.24■□□□□ 0.83
Nup98-206ENSMUST00000211235 TonslQ6NZL6 1363 aa20.22■□□□□ 0.83
Nup98-206ENSMUST00000211235 Gm38655A0A286YDK6 273 aa20.2■□□□□ 0.82
Nup98-206ENSMUST00000211235 Fmn1Q05860 1466 aa20.18■□□□□ 0.82
Nup98-206ENSMUST00000211235 Plekhg3Q4VAC9 1341 aa20.14■□□□□ 0.82
Nup98-206ENSMUST00000211235 Ncapd3Q6ZQK0 1506 aa20.1■□□□□ 0.81
Nup98-206ENSMUST00000211235 Smarca4Q3TKT4 1613 aaKnown RBP20.07■□□□□ 0.8
Nup98-206ENSMUST00000211235 Clip1Q922J3 1391 aa20.07■□□□□ 0.8
Nup98-206ENSMUST00000211235 Eif4g1Q6NZJ6 1600 aaKnown RBP20.04■□□□□ 0.8
Nup98-206ENSMUST00000211235 Npm2Q80W85 207 aa20■□□□□ 0.79
Nup98-206ENSMUST00000211235 CenpbP27790 599 aa19.97■□□□□ 0.79
Nup98-206ENSMUST00000211235 Eid3Q3V124 375 aa19.91■□□□□ 0.78
Nup98-206ENSMUST00000211235 Kdm5bQ80Y84 1544 aa19.9■□□□□ 0.78
Nup98-206ENSMUST00000211235 Hnrnpul2Q00PI9 745 aaKnown RBP19.87■□□□□ 0.77
Nup98-206ENSMUST00000211235 SafbD3YXK2 937 aaKnown RBP19.84■□□□□ 0.77
Nup98-206ENSMUST00000211235 Arhgap35Q91YM2 1499 aa19.84■□□□□ 0.77
Nup98-206ENSMUST00000211235 Arap1Q4LDD4 1452 aa19.83■□□□□ 0.77
Nup98-206ENSMUST00000211235 PtprkP35822 1457 aa19.8■□□□□ 0.76
Nup98-206ENSMUST00000211235 Myt1Q8CFC2 1127 aa19.8■□□□□ 0.76
Nup98-206ENSMUST00000211235 Ap3b1Q9Z1T1 1105 aa19.77■□□□□ 0.76
Nup98-206ENSMUST00000211235 Iqgap2Q3UQ44 1575 aa19.77■□□□□ 0.76
Nup98-206ENSMUST00000211235 Mapk8ip2Q9ERE9 830 aa19.73■□□□□ 0.75
Nup98-206ENSMUST00000211235 Eea1Q8BL66 1411 aa19.7■□□□□ 0.74
Nup98-206ENSMUST00000211235 TnnQ80Z71 1560 aa19.7■□□□□ 0.74
Nup98-206ENSMUST00000211235 Fam71e1A1L3C1 212 aa19.69■□□□□ 0.74
Nup98-206ENSMUST00000211235 Arhgef5E9Q7D5 1581 aa19.69■□□□□ 0.74
Nup98-206ENSMUST00000211235 NrkQ9R0G8 1455 aa19.67■□□□□ 0.74
Nup98-206ENSMUST00000211235 Rpap1Q80TE0 1409 aa19.65■□□□□ 0.74
Nup98-206ENSMUST00000211235 Setd5Q5XJV7 1441 aa19.62■□□□□ 0.73
Nup98-206ENSMUST00000211235 Ccdc18Q640L5 1455 aa19.61■□□□□ 0.73
Nup98-206ENSMUST00000211235 Znf710Q3U288 666 aa19.59■□□□□ 0.73
Nup98-206ENSMUST00000211235 AqrQ8CFQ3 1481 aaKnown RBP19.58■□□□□ 0.73
Nup98-206ENSMUST00000211235 Baz1bQ9Z277 1479 aa19.57■□□□□ 0.72
Nup98-206ENSMUST00000211235 Tnnt3Q9QZ47 272 aa19.57■□□□□ 0.72
Nup98-206ENSMUST00000211235 TchhA0A0B4J1F9 1599 aa19.56■□□□□ 0.72
Nup98-206ENSMUST00000211235 Tiam1Q60610 1591 aa19.53■□□□□ 0.72
Nup98-206ENSMUST00000211235 Naip1Q9QWK5 1403 aa19.52■□□□□ 0.71
Nup98-206ENSMUST00000211235 Il27Q8K3I6 234 aa19.51■□□□□ 0.71
Nup98-206ENSMUST00000211235 Atad2bE9Q166 1460 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 75.7 ms