RNA–Protein interactions for RNA: ENSMUST00000211046.1

Rfx1-204, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rfx1, Length 3,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-204ENSMUST00000211046 NischQ80TM9 1593 aa22.43■■□□□ 1.18
Rfx1-204ENSMUST00000211046 Rhox8Q6VSS7 320 aa22.12■■□□□ 1.13
Rfx1-204ENSMUST00000211046 Rpgrip1Q9EPQ2 1331 aa21.98■■□□□ 1.11
Rfx1-204ENSMUST00000211046 Abcc9P70170 1546 aa21.68■■□□□ 1.06
Rfx1-204ENSMUST00000211046 Gm35339A0A140LHH9 1649 aa21.66■■□□□ 1.06
Rfx1-204ENSMUST00000211046 Rtl1Q7M732 1744 aa21.6■■□□□ 1.05
Rfx1-204ENSMUST00000211046 Ccdc180J3QNE4 1664 aa21.52■■□□□ 1.04
Rfx1-204ENSMUST00000211046 Acin1Q9JIX8 1338 aaKnown RBP21.34■■□□□ 1.01
Rfx1-204ENSMUST00000211046 Ehmt2Q9Z148 1263 aaKnown RBP21.2■□□□□ 0.98
Rfx1-204ENSMUST00000211046 Abcc8B2RUS7 1588 aa21.02■□□□□ 0.96
Rfx1-204ENSMUST00000211046 Pcgf6Q99NA9 353 aa20.96■□□□□ 0.95
Rfx1-204ENSMUST00000211046 Zcchc6Q5BLK4 1491 aaKnown RBP20.7■□□□□ 0.9
Rfx1-204ENSMUST00000211046 DiexfQ8BTT6 772 aaKnown RBP20.64■□□□□ 0.9
Rfx1-204ENSMUST00000211046 HrcG5E8J6 738 aa20.62■□□□□ 0.89
Rfx1-204ENSMUST00000211046 Dcaf1Q80TR8 1506 aa20.56■□□□□ 0.88
Rfx1-204ENSMUST00000211046 Supt5hO55201 1082 aaKnown RBP20.43■□□□□ 0.86
Rfx1-204ENSMUST00000211046 Ccdc136Q3TVA9 1136 aa20.4■□□□□ 0.86
Rfx1-204ENSMUST00000211046 Trim41Q5NCC3 630 aa20.23■□□□□ 0.83
Rfx1-204ENSMUST00000211046 Neurod1Q60867 357 aa20.2■□□□□ 0.82
Rfx1-204ENSMUST00000211046 CenpbP27790 599 aa20.18■□□□□ 0.82
Rfx1-204ENSMUST00000211046 Las1lA2BE28 776 aaKnown RBP20.14■□□□□ 0.81
Rfx1-204ENSMUST00000211046 Zeb1Q64318 1117 aa20.05■□□□□ 0.8
Rfx1-204ENSMUST00000211046 ScribQ80U72 1612 aa20.02■□□□□ 0.79
Rfx1-204ENSMUST00000211046 Amer1Q7TS75 1132 aa19.98■□□□□ 0.79
Rfx1-204ENSMUST00000211046 Myt1Q8CFC2 1127 aa19.91■□□□□ 0.78
Rfx1-204ENSMUST00000211046 Bcl11aQ9QYE3 773 aa19.9■□□□□ 0.78
Rfx1-204ENSMUST00000211046 Cngb1E1AZ71 1325 aa19.83■□□□□ 0.77
Rfx1-204ENSMUST00000211046 NefmP08553 848 aa19.76■□□□□ 0.75
Rfx1-204ENSMUST00000211046 Cep164Q5DU05 1446 aa19.71■□□□□ 0.75
Rfx1-204ENSMUST00000211046 Rb1cc1Q9ESK9 1588 aa19.7■□□□□ 0.74
Rfx1-204ENSMUST00000211046 Sall2Q9QX96 1004 aa19.69■□□□□ 0.74
Rfx1-204ENSMUST00000211046 Gab3Q8BSM5 595 aa19.65■□□□□ 0.74
Rfx1-204ENSMUST00000211046 1700123L14RikQ3V2K7 440 aa19.64■□□□□ 0.73
Rfx1-204ENSMUST00000211046 PrkcshO08795 521 aa19.62■□□□□ 0.73
Rfx1-204ENSMUST00000211046 Mier1Q5UAK0 511 aa19.61■□□□□ 0.73
Rfx1-204ENSMUST00000211046 Csrnp3P59055 597 aa19.58■□□□□ 0.73
Rfx1-204ENSMUST00000211046 Anks4bQ8K3X6 423 aa19.58■□□□□ 0.73
Rfx1-204ENSMUST00000211046 NacadQ5SWP3 1504 aa19.5■□□□□ 0.71
Rfx1-204ENSMUST00000211046 Wdr66E9Q743 1299 aa19.48■□□□□ 0.71
Rfx1-204ENSMUST00000211046 Kdm5dQ62240 1548 aa19.47■□□□□ 0.71
Rfx1-204ENSMUST00000211046 Baz1aO88379 1555 aa19.44■□□□□ 0.7
Rfx1-204ENSMUST00000211046 Chic1Q8CBW7 227 aa19.38■□□□□ 0.69
Rfx1-204ENSMUST00000211046 Cdk11bP24788 784 aaKnown RBP19.35■□□□□ 0.69
Rfx1-204ENSMUST00000211046 Nop58Q6DFW4 536 aaKnown RBP19.29■□□□□ 0.68
Rfx1-204ENSMUST00000211046 Aplp2Q06335 707 aa19.26■□□□□ 0.67
Rfx1-204ENSMUST00000211046 Rsf1E9PWW9 1441 aaKnown RBP19.23■□□□□ 0.67
Rfx1-204ENSMUST00000211046 Aebp2Q9Z248 504 aaKnown RBP19.22■□□□□ 0.67
Rfx1-204ENSMUST00000211046 Ppargc1bQ8VHJ7 1014 aa19.22■□□□□ 0.67
Rfx1-204ENSMUST00000211046 UbtfP25976 765 aaKnown RBP19.2■□□□□ 0.66
Rfx1-204ENSMUST00000211046 Gm38655A0A286YDK6 273 aa19.14■□□□□ 0.65
Rfx1-204ENSMUST00000211046 ClspnQ80YR7 1315 aa19.13■□□□□ 0.65
Rfx1-204ENSMUST00000211046 Sycp2Q9CUU3 1500 aa19.08■□□□□ 0.65
Rfx1-204ENSMUST00000211046 Smarca2Q6DIC0 1577 aa19.01■□□□□ 0.63
Rfx1-204ENSMUST00000211046 Ccdc88bQ4QRL3 1481 aa19■□□□□ 0.63
Rfx1-204ENSMUST00000211046 Ifnlr1Q8CGK5 535 aa19■□□□□ 0.63
Rfx1-204ENSMUST00000211046 TonslQ6NZL6 1363 aa18.9■□□□□ 0.62
Rfx1-204ENSMUST00000211046 Esf1Q3V1V3 845 aaKnown RBP18.88■□□□□ 0.61
Rfx1-204ENSMUST00000211046 Golga3P55937 1487 aa18.83■□□□□ 0.61
Rfx1-204ENSMUST00000211046 Brd4Q9ESU6 1400 aaKnown RBP18.83■□□□□ 0.6
Rfx1-204ENSMUST00000211046 Crybg2B7ZCC2 1516 aa18.81■□□□□ 0.6
Rfx1-204ENSMUST00000211046 Myt1lP97500 1187 aa18.78■□□□□ 0.6
Rfx1-204ENSMUST00000211046 BicraF8VPZ9 1578 aa18.76■□□□□ 0.59
Rfx1-204ENSMUST00000211046 Fam71e1A1L3C1 212 aa18.71■□□□□ 0.59
Rfx1-204ENSMUST00000211046 Mapk8ip2Q9ERE9 830 aa18.67■□□□□ 0.58
Rfx1-204ENSMUST00000211046 Tnnt3Q9QZ47 272 aa18.66■□□□□ 0.58
Rfx1-204ENSMUST00000211046 SafbD3YXK2 937 aaKnown RBP18.64■□□□□ 0.57
Rfx1-204ENSMUST00000211046 Plppr3Q7TPB0 716 aa18.64■□□□□ 0.57
Rfx1-204ENSMUST00000211046 Hnrnpul2Q00PI9 745 aaKnown RBP18.63■□□□□ 0.57
Rfx1-204ENSMUST00000211046 Ttbk1Q6PCN3 1308 aa18.6■□□□□ 0.57
Rfx1-204ENSMUST00000211046 Cecr2E9Q2Z1 1453 aa18.56■□□□□ 0.56
Rfx1-204ENSMUST00000211046 Pknox2Q8BG99 474 aa18.55■□□□□ 0.56
Rfx1-204ENSMUST00000211046 Plekhg3Q4VAC9 1341 aa18.55■□□□□ 0.56
Rfx1-204ENSMUST00000211046 Ap3b1Q9Z1T1 1105 aa18.54■□□□□ 0.56
Rfx1-204ENSMUST00000211046 Npm2Q80W85 207 aa18.52■□□□□ 0.56
Rfx1-204ENSMUST00000211046 Synj1Q8CHC4 1574 aa18.49■□□□□ 0.55
Rfx1-204ENSMUST00000211046 Eid3Q3V124 375 aa18.45■□□□□ 0.54
Rfx1-204ENSMUST00000211046 Rapgef2Q8CHG7 1496 aa18.43■□□□□ 0.54
Rfx1-204ENSMUST00000211046 Clip1Q922J3 1391 aa18.41■□□□□ 0.54
Rfx1-204ENSMUST00000211046 Anp32aO35381 247 aa18.4■□□□□ 0.54
Rfx1-204ENSMUST00000211046 Cep162Q6ZQ06 1403 aa18.38■□□□□ 0.53
Rfx1-204ENSMUST00000211046 Stra8P70278 393 aa18.34■□□□□ 0.53
Rfx1-204ENSMUST00000211046 Pds5bQ4VA53 1446 aaKnown RBP18.33■□□□□ 0.53
Rfx1-204ENSMUST00000211046 Hdac5Q9Z2V6 1113 aa18.33■□□□□ 0.52
Rfx1-204ENSMUST00000211046 CftrP26361 1476 aa18.32■□□□□ 0.52
Rfx1-204ENSMUST00000211046 Dnajc5bQ9CQ94 199 aa18.32■□□□□ 0.52
Rfx1-204ENSMUST00000211046 Top2bQ64511 1612 aa18.28■□□□□ 0.52
Rfx1-204ENSMUST00000211046 Ncapd3Q6ZQK0 1506 aa18.25■□□□□ 0.51
Rfx1-204ENSMUST00000211046 Pelp1Q9DBD5 1123 aaKnown RBP18.23■□□□□ 0.51
Rfx1-204ENSMUST00000211046 Cc2d2aQ8CFW7 1633 aa18.21■□□□□ 0.51
Rfx1-204ENSMUST00000211046 NclP09405 707 aaKnown RBP18.21■□□□□ 0.51
Rfx1-204ENSMUST00000211046 Rtl5Q5DTT4 599 aa18.2■□□□□ 0.5
Rfx1-204ENSMUST00000211046 Znf710Q3U288 666 aa18.18■□□□□ 0.5
Rfx1-204ENSMUST00000211046 Calr4Q3TQS0 420 aa18.17■□□□□ 0.5
Rfx1-204ENSMUST00000211046 Atad2bE9Q166 1460 aaKnown RBP18.16■□□□□ 0.5
Rfx1-204ENSMUST00000211046 Fmn1Q05860 1466 aa18.15■□□□□ 0.5
Rfx1-204ENSMUST00000211046 Fgd1P52734 960 aa18.13■□□□□ 0.49
Rfx1-204ENSMUST00000211046 Nolc1E9Q5C9 702 aaKnown RBP18.13■□□□□ 0.49
Rfx1-204ENSMUST00000211046 Slc24a1Q91WD8 1130 aa18.12■□□□□ 0.49
Rfx1-204ENSMUST00000211046 Top2aQ01320 1528 aaKnown RBP18.12■□□□□ 0.49
Rfx1-204ENSMUST00000211046 NrdcQ8BHG1 1161 aa18.08■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms