RNA–Protein interactions for RNA: ENSMUST00000208649.1

5330413D20Rik-201, mousemouse

TSL 1 (best) BASIC

Gene 5330413D20Rik, Length 1,416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
5330413D20Rik-201ENSMUST00000208649 Gm35339A0A140LHH9 1649 aa24.56■■□□□ 1.52
5330413D20Rik-201ENSMUST00000208649 NischQ80TM9 1593 aa24.27■■□□□ 1.48
5330413D20Rik-201ENSMUST00000208649 Abcc9P70170 1546 aa23.65■■□□□ 1.38
5330413D20Rik-201ENSMUST00000208649 Abcc8B2RUS7 1588 aa23.49■■□□□ 1.35
5330413D20Rik-201ENSMUST00000208649 ScribQ80U72 1612 aa22.86■■□□□ 1.25
5330413D20Rik-201ENSMUST00000208649 Dnajc5bQ9CQ94 199 aa22.23■■□□□ 1.15
5330413D20Rik-201ENSMUST00000208649 NacadQ5SWP3 1504 aa22.03■■□□□ 1.12
5330413D20Rik-201ENSMUST00000208649 Kdm5dQ62240 1548 aa22.02■■□□□ 1.12
5330413D20Rik-201ENSMUST00000208649 Sycp2Q9CUU3 1500 aa21.61■■□□□ 1.05
5330413D20Rik-201ENSMUST00000208649 Dcaf1Q80TR8 1506 aa21.49■■□□□ 1.03
5330413D20Rik-201ENSMUST00000208649 BicraF8VPZ9 1578 aa21.45■■□□□ 1.03
5330413D20Rik-201ENSMUST00000208649 Rb1cc1Q9ESK9 1588 aa21.17■□□□□ 0.98
5330413D20Rik-201ENSMUST00000208649 Thoc2B1AZI6 1594 aaKnown RBP21.14■□□□□ 0.97
5330413D20Rik-201ENSMUST00000208649 Rhox8Q6VSS7 320 aa20.97■□□□□ 0.95
5330413D20Rik-201ENSMUST00000208649 Pds5bQ4VA53 1446 aaKnown RBP20.89■□□□□ 0.94
5330413D20Rik-201ENSMUST00000208649 Dnajc5P60904 198 aa20.84■□□□□ 0.93
5330413D20Rik-201ENSMUST00000208649 Baz1aO88379 1555 aa20.8■□□□□ 0.92
5330413D20Rik-201ENSMUST00000208649 Cc2d2aQ8CFW7 1633 aa20.79■□□□□ 0.92
5330413D20Rik-201ENSMUST00000208649 Zcchc6Q5BLK4 1491 aaKnown RBP20.67■□□□□ 0.9
5330413D20Rik-201ENSMUST00000208649 Mapk8ip2Q9ERE9 830 aa20.64■□□□□ 0.89
5330413D20Rik-201ENSMUST00000208649 Crybg2B7ZCC2 1516 aa20.62■□□□□ 0.89
5330413D20Rik-201ENSMUST00000208649 Ccdc180J3QNE4 1664 aa20.6■□□□□ 0.89
5330413D20Rik-201ENSMUST00000208649 Atad2bE9Q166 1460 aaKnown RBP20.56■□□□□ 0.88
5330413D20Rik-201ENSMUST00000208649 Ercc6F8VPZ5 1481 aa20.47■□□□□ 0.87
5330413D20Rik-201ENSMUST00000208649 Trim41Q5NCC3 630 aa20.44■□□□□ 0.86
5330413D20Rik-201ENSMUST00000208649 Fam135aQ6NS59 1506 aa20.44■□□□□ 0.86
5330413D20Rik-201ENSMUST00000208649 Smarca2Q6DIC0 1577 aa20.33■□□□□ 0.85
5330413D20Rik-201ENSMUST00000208649 Smarca4Q3TKT4 1613 aaKnown RBP20.33■□□□□ 0.85
5330413D20Rik-201ENSMUST00000208649 Iqgap2Q3UQ44 1575 aa20.28■□□□□ 0.84
5330413D20Rik-201ENSMUST00000208649 Cecr2E9Q2Z1 1453 aa20.26■□□□□ 0.83
5330413D20Rik-201ENSMUST00000208649 Wdr62Q3U3T8 1523 aa20.11■□□□□ 0.81
5330413D20Rik-201ENSMUST00000208649 Frmpd1A2AKB4 1549 aa20.09■□□□□ 0.81
5330413D20Rik-201ENSMUST00000208649 Phldb1Q6PDH0 1371 aaKnown RBP20.07■□□□□ 0.8
5330413D20Rik-201ENSMUST00000208649 Ubl4bQ9CQ84 188 aa20■□□□□ 0.79
5330413D20Rik-201ENSMUST00000208649 Baz1bQ9Z277 1479 aa19.97■□□□□ 0.79
5330413D20Rik-201ENSMUST00000208649 Mrc2Q64449 1479 aa19.96■□□□□ 0.79
5330413D20Rik-201ENSMUST00000208649 Unc13aQ4KUS2 1712 aa19.89■□□□□ 0.77
5330413D20Rik-201ENSMUST00000208649 CftrP26361 1476 aa19.71■□□□□ 0.75
5330413D20Rik-201ENSMUST00000208649 Synj1Q8CHC4 1574 aa19.7■□□□□ 0.74
5330413D20Rik-201ENSMUST00000208649 Cttnbp2B9EJA2 1648 aa19.69■□□□□ 0.74
5330413D20Rik-201ENSMUST00000208649 Lrriq1Q0P5X1 1673 aa19.69■□□□□ 0.74
5330413D20Rik-201ENSMUST00000208649 Ccdc136Q3TVA9 1136 aa19.65■□□□□ 0.74
5330413D20Rik-201ENSMUST00000208649 Rtl1Q7M732 1744 aa19.65■□□□□ 0.74
5330413D20Rik-201ENSMUST00000208649 Brd4Q9ESU6 1400 aaKnown RBP19.61■□□□□ 0.73
5330413D20Rik-201ENSMUST00000208649 Shroom2A2ALU4 1481 aa19.52■□□□□ 0.72
5330413D20Rik-201ENSMUST00000208649 Esf1Q3V1V3 845 aaKnown RBP19.51■□□□□ 0.71
5330413D20Rik-201ENSMUST00000208649 Rsf1E9PWW9 1441 aaKnown RBP19.51■□□□□ 0.71
5330413D20Rik-201ENSMUST00000208649 Col17a1Q07563 1470 aa19.49■□□□□ 0.71
5330413D20Rik-201ENSMUST00000208649 Cux2P70298 1426 aa19.39■□□□□ 0.69
5330413D20Rik-201ENSMUST00000208649 Kif15Q6P9L6 1387 aa19.38■□□□□ 0.69
5330413D20Rik-201ENSMUST00000208649 Kif21aQ9QXL2 1672 aa19.37■□□□□ 0.69
5330413D20Rik-201ENSMUST00000208649 Eif4g3Q80XI3 1579 aaKnown RBP19.33■□□□□ 0.69
5330413D20Rik-201ENSMUST00000208649 Top2bQ64511 1612 aa19.21■□□□□ 0.67
5330413D20Rik-201ENSMUST00000208649 Npm1Q61937 292 aaKnown RBP19.2■□□□□ 0.66
5330413D20Rik-201ENSMUST00000208649 Pabpn1Q8CCS6 302 aaKnown RBP19.2■□□□□ 0.66
5330413D20Rik-201ENSMUST00000208649 Lamc3Q9R0B6 1581 aa19.16■□□□□ 0.66
5330413D20Rik-201ENSMUST00000208649 Pcdh10E9PXQ7 1057 aa19.14■□□□□ 0.65
5330413D20Rik-201ENSMUST00000208649 Il27Q8K3I6 234 aa19.08■□□□□ 0.65
5330413D20Rik-201ENSMUST00000208649 Cep164Q5DU05 1446 aa19.08■□□□□ 0.64
5330413D20Rik-201ENSMUST00000208649 Pelp1Q9DBD5 1123 aaKnown RBP19.08■□□□□ 0.64
5330413D20Rik-201ENSMUST00000208649 Zcchc11B2RX14 1644 aaKnown RBP18.99■□□□□ 0.63
5330413D20Rik-201ENSMUST00000208649 Urb2E9Q7L1 1524 aaKnown RBP18.99■□□□□ 0.63
5330413D20Rik-201ENSMUST00000208649 Cngb1E1AZ71 1325 aa18.97■□□□□ 0.63
5330413D20Rik-201ENSMUST00000208649 Dhx29Q6PGC1 1365 aaKnown RBP18.97■□□□□ 0.63
5330413D20Rik-201ENSMUST00000208649 Ccdc18Q640L5 1455 aa18.95■□□□□ 0.62
5330413D20Rik-201ENSMUST00000208649 Plb1Q3TTY0 1478 aa18.94■□□□□ 0.62
5330413D20Rik-201ENSMUST00000208649 Arhgef5E9Q7D5 1581 aa18.88■□□□□ 0.61
5330413D20Rik-201ENSMUST00000208649 TnnQ80Z71 1560 aa18.88■□□□□ 0.61
5330413D20Rik-201ENSMUST00000208649 Crocc2F6XLV1 1638 aa18.86■□□□□ 0.61
5330413D20Rik-201ENSMUST00000208649 LrpprcQ6PB66 1392 aaKnown RBP18.85■□□□□ 0.61
5330413D20Rik-201ENSMUST00000208649 Golga3P55937 1487 aa18.85■□□□□ 0.61
5330413D20Rik-201ENSMUST00000208649 Camsap1A2AHC3 1581 aa18.84■□□□□ 0.61
5330413D20Rik-201ENSMUST00000208649 Ttbk1Q6PCN3 1308 aa18.77■□□□□ 0.6
5330413D20Rik-201ENSMUST00000208649 Rusc2Q80U22 1514 aa18.76■□□□□ 0.59
5330413D20Rik-201ENSMUST00000208649 PogzQ8BZH4 1409 aaKnown RBP18.73■□□□□ 0.59
5330413D20Rik-201ENSMUST00000208649 Ift140E9PY46 1464 aa18.71■□□□□ 0.59
5330413D20Rik-201ENSMUST00000208649 Adgrl3Q80TS3 1537 aa18.71■□□□□ 0.59
5330413D20Rik-201ENSMUST00000208649 Fmn1Q05860 1466 aa18.67■□□□□ 0.58
5330413D20Rik-201ENSMUST00000208649 Duox2A2AQ99 1517 aa18.65■□□□□ 0.58
5330413D20Rik-201ENSMUST00000208649 PtprtQ99M80 1454 aa18.57■□□□□ 0.56
5330413D20Rik-201ENSMUST00000208649 Grin2bQ01097 1482 aa18.56■□□□□ 0.56
5330413D20Rik-201ENSMUST00000208649 Disp1Q3TDN0 1521 aa18.55■□□□□ 0.56
5330413D20Rik-201ENSMUST00000208649 Cep170Q6A065 1588 aa18.55■□□□□ 0.56
5330413D20Rik-201ENSMUST00000208649 Gm156Q58A37 223 aa18.54■□□□□ 0.56
5330413D20Rik-201ENSMUST00000208649 PtprkP35822 1457 aa18.54■□□□□ 0.56
5330413D20Rik-201ENSMUST00000208649 Samd9lQ69Z37 1561 aa18.52■□□□□ 0.56
5330413D20Rik-201ENSMUST00000208649 Setd1bQ8CFT2 1985 aa18.5■□□□□ 0.55
5330413D20Rik-201ENSMUST00000208649 Gapvd1Q6PAR5 1458 aa18.45■□□□□ 0.54
5330413D20Rik-201ENSMUST00000208649 Nup160Q9Z0W3 1402 aaKnown RBP18.45■□□□□ 0.54
5330413D20Rik-201ENSMUST00000208649 Rad54l2Q99NG0 1466 aa18.45■□□□□ 0.54
5330413D20Rik-201ENSMUST00000208649 Cc2d2bA0A286YDU8 1405 aa18.44■□□□□ 0.54
5330413D20Rik-201ENSMUST00000208649 Pbrm1Q8BSQ9 1634 aaKnown RBP18.43■□□□□ 0.54
5330413D20Rik-201ENSMUST00000208649 Pprc1Q6NZN1 1644 aa18.4■□□□□ 0.54
5330413D20Rik-201ENSMUST00000208649 Efcab5A0JP43 1406 aa18.39■□□□□ 0.53
5330413D20Rik-201ENSMUST00000208649 Plekhg3Q4VAC9 1341 aa18.38■□□□□ 0.53
5330413D20Rik-201ENSMUST00000208649 Grin2aP35436 1464 aa18.36■□□□□ 0.53
5330413D20Rik-201ENSMUST00000208649 Ccdc88bQ4QRL3 1481 aa18.34■□□□□ 0.53
5330413D20Rik-201ENSMUST00000208649 AqrQ8CFQ3 1481 aaKnown RBP18.34■□□□□ 0.53
5330413D20Rik-201ENSMUST00000208649 Magi3Q9EQJ9 1476 aa18.33■□□□□ 0.52
5330413D20Rik-201ENSMUST00000208649 Fgd6Q69ZL1 1399 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms