RNA–Protein interactions for RNA: ENSMUST00000198437.4

Dclk1-208, Transcript of Serine/threonine-protein kinase DCLK1, mouse

TSL 1 (best) BASIC

Gene Dclk1, Length 4,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Dclk1-208	ENSMUST00000198437	Nisch	Q80TM9	1593 aa		13.61	□□□□□ -0.23
Dclk1-208	ENSMUST00000198437	Gm35339	A0A140LHH9	1649 aa		13.5	□□□□□ -0.25
Dclk1-208	ENSMUST00000198437	Rpgrip1	Q9EPQ2	1331 aa		13.43	□□□□□ -0.26
Dclk1-208	ENSMUST00000198437	Abcc9	P70170	1546 aa		13.12	□□□□□ -0.31
Dclk1-208	ENSMUST00000198437	Abcc8	B2RUS7	1588 aa		12.99	□□□□□ -0.33
Dclk1-208	ENSMUST00000198437	Rtl1	Q7M732	1744 aa		12.71	□□□□□ -0.37
Dclk1-208	ENSMUST00000198437	Pcgf6	Q99NA9	353 aa		12.63	□□□□□ -0.39
Dclk1-208	ENSMUST00000198437	Acin1	Q9JIX8	1338 aa	Known RBP	12.6	□□□□□ -0.39
Dclk1-208	ENSMUST00000198437	Myt1	Q8CFC2	1127 aa		12.58	□□□□□ -0.4
Dclk1-208	ENSMUST00000198437	Ccdc180	J3QNE4	1664 aa		12.52	□□□□□ -0.41
Dclk1-208	ENSMUST00000198437	Rhox8	Q6VSS7	320 aa		12.4	□□□□□ -0.43
Dclk1-208	ENSMUST00000198437	Las1l	A2BE28	776 aa	Known RBP	12.31	□□□□□ -0.44
Dclk1-208	ENSMUST00000198437	Nacad	Q5SWP3	1504 aa		12.31	□□□□□ -0.44
Dclk1-208	ENSMUST00000198437	Dcaf1	Q80TR8	1506 aa		12.28	□□□□□ -0.44
Dclk1-208	ENSMUST00000198437	Trim41	Q5NCC3	630 aa		12.22	□□□□□ -0.45
Dclk1-208	ENSMUST00000198437	Cenpb	P27790	599 aa		12.18	□□□□□ -0.46
Dclk1-208	ENSMUST00000198437	Scrib	Q80U72	1612 aa		12.13	□□□□□ -0.47
Dclk1-208	ENSMUST00000198437	Diexf	Q8BTT6	772 aa	Known RBP	12.09	□□□□□ -0.47
Dclk1-208	ENSMUST00000198437	Neurod1	Q60867	357 aa		12.06	□□□□□ -0.48
Dclk1-208	ENSMUST00000198437	Kdm5d	Q62240	1548 aa		12.04	□□□□□ -0.48
Dclk1-208	ENSMUST00000198437	1700123L14Rik	Q3V2K7	440 aa		11.95	□□□□□ -0.5
Dclk1-208	ENSMUST00000198437	Sycp2	Q9CUU3	1500 aa		11.91	□□□□□ -0.5
Dclk1-208	ENSMUST00000198437	Rb1cc1	Q9ESK9	1588 aa		11.88	□□□□□ -0.51
Dclk1-208	ENSMUST00000198437	Supt5h	O55201	1082 aa	Known RBP	11.86	□□□□□ -0.51
Dclk1-208	ENSMUST00000198437	Crybg2	B7ZCC2	1516 aa		11.86	□□□□□ -0.51
Dclk1-208	ENSMUST00000198437	Anks4b	Q8K3X6	423 aa		11.86	□□□□□ -0.51
Dclk1-208	ENSMUST00000198437	Bcl11a	Q9QYE3	773 aa		11.84	□□□□□ -0.51
Dclk1-208	ENSMUST00000198437	Aplp2	Q06335	707 aa		11.83	□□□□□ -0.52
Dclk1-208	ENSMUST00000198437	Zcchc6	Q5BLK4	1491 aa	Known RBP	11.83	□□□□□ -0.52
Dclk1-208	ENSMUST00000198437	Baz1a	O88379	1555 aa		11.78	□□□□□ -0.52
Dclk1-208	ENSMUST00000198437	Cngb1	E1AZ71	1325 aa		11.73	□□□□□ -0.53
Dclk1-208	ENSMUST00000198437	Pds5b	Q4VA53	1446 aa	Known RBP	11.69	□□□□□ -0.54
Dclk1-208	ENSMUST00000198437	Hrc	G5E8J6	738 aa		11.69	□□□□□ -0.54
Dclk1-208	ENSMUST00000198437	Csrnp3	P59055	597 aa		11.61	□□□□□ -0.55
Dclk1-208	ENSMUST00000198437	Ercc6	F8VPZ5	1481 aa		11.52	□□□□□ -0.57
Dclk1-208	ENSMUST00000198437	Amer1	Q7TS75	1132 aa		11.49	□□□□□ -0.57
Dclk1-208	ENSMUST00000198437	Atad2b	E9Q166	1460 aa	Known RBP	11.48	□□□□□ -0.57
Dclk1-208	ENSMUST00000198437	Brd4	Q9ESU6	1400 aa	Known RBP	11.45	□□□□□ -0.58
Dclk1-208	ENSMUST00000198437	Smarca2	Q6DIC0	1577 aa		11.43	□□□□□ -0.58
Dclk1-208	ENSMUST00000198437	Baz1b	Q9Z277	1479 aa		11.42	□□□□□ -0.58
Dclk1-208	ENSMUST00000198437	Esf1	Q3V1V3	845 aa	Known RBP	11.41	□□□□□ -0.58
Dclk1-208	ENSMUST00000198437	Prkcsh	O08795	521 aa		11.4	□□□□□ -0.58
Dclk1-208	ENSMUST00000198437	Bicra	F8VPZ9	1578 aa		11.4	□□□□□ -0.58
Dclk1-208	ENSMUST00000198437	Nefm	P08553	848 aa		11.38	□□□□□ -0.59
Dclk1-208	ENSMUST00000198437	Ehmt2	Q9Z148	1263 aa	Known RBP	11.38	□□□□□ -0.59
Dclk1-208	ENSMUST00000198437	Smarca4	Q3TKT4	1613 aa	Known RBP	11.34	□□□□□ -0.59
Dclk1-208	ENSMUST00000198437	Sall2	Q9QX96	1004 aa		11.32	□□□□□ -0.6
Dclk1-208	ENSMUST00000198437	Ccdc136	Q3TVA9	1136 aa		11.29	□□□□□ -0.6
Dclk1-208	ENSMUST00000198437	Rtl5	Q5DTT4	599 aa		11.27	□□□□□ -0.6
Dclk1-208	ENSMUST00000198437	Cdk11b	P24788	784 aa	Known RBP	11.24	□□□□□ -0.61
Dclk1-208	ENSMUST00000198437	Phldb1	Q6PDH0	1371 aa	Known RBP	11.22	□□□□□ -0.61
Dclk1-208	ENSMUST00000198437	Iqgap2	Q3UQ44	1575 aa		11.19	□□□□□ -0.62
Dclk1-208	ENSMUST00000198437	Fam71e1	A1L3C1	212 aa		11.18	□□□□□ -0.62
Dclk1-208	ENSMUST00000198437	Ubl4b	Q9CQ84	188 aa		11.16	□□□□□ -0.62
Dclk1-208	ENSMUST00000198437	Fgd1	P52734	960 aa		11.13	□□□□□ -0.63
Dclk1-208	ENSMUST00000198437	Nop58	Q6DFW4	536 aa	Known RBP	11.13	□□□□□ -0.63
Dclk1-208	ENSMUST00000198437	Cttnbp2	B9EJA2	1648 aa		11.12	□□□□□ -0.63
Dclk1-208	ENSMUST00000198437	Rsf1	E9PWW9	1441 aa	Known RBP	11.11	□□□□□ -0.63
Dclk1-208	ENSMUST00000198437	Nrdc	Q8BHG1	1161 aa		11.11	□□□□□ -0.63
Dclk1-208	ENSMUST00000198437	Zeb1	Q64318	1117 aa		11.11	□□□□□ -0.63
Dclk1-208	ENSMUST00000198437	Ifnlr1	Q8CGK5	535 aa		11.08	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Cftr	P26361	1476 aa		11.08	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Thoc2	B1AZI6	1594 aa	Known RBP	11.07	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Clspn	Q80YR7	1315 aa		11.07	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Npm1	Q61937	292 aa	Known RBP	11.06	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Tnnt3	Q9QZ47	272 aa		11.06	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Cep164	Q5DU05	1446 aa		11.05	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Cecr2	E9Q2Z1	1453 aa		11.05	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Wdr62	Q3U3T8	1523 aa		11.03	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Catip	B9EKE5	520 aa		11.03	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Hdac5	Q9Z2V6	1113 aa		11.03	□□□□□ -0.64
Dclk1-208	ENSMUST00000198437	Fam135a	Q6NS59	1506 aa		11.01	□□□□□ -0.65
Dclk1-208	ENSMUST00000198437	Pknox2	Q8BG99	474 aa		10.98	□□□□□ -0.65
Dclk1-208	ENSMUST00000198437	Ccdc9	Q8VC31	543 aa	Known RBP	10.98	□□□□□ -0.65
Dclk1-208	ENSMUST00000198437	Frmpd1	A2AKB4	1549 aa		10.98	□□□□□ -0.65
Dclk1-208	ENSMUST00000198437	Cc2d2a	Q8CFW7	1633 aa		10.96	□□□□□ -0.65
Dclk1-208	ENSMUST00000198437	Anp32a	O35381	247 aa		10.95	□□□□□ -0.66
Dclk1-208	ENSMUST00000198437	Ccdc18	Q640L5	1455 aa		10.95	□□□□□ -0.66
Dclk1-208	ENSMUST00000198437	Golga3	P55937	1487 aa		10.94	□□□□□ -0.66
Dclk1-208	ENSMUST00000198437	Kif15	Q6P9L6	1387 aa		10.94	□□□□□ -0.66
Dclk1-208	ENSMUST00000198437	Pelp1	Q9DBD5	1123 aa	Known RBP	10.94	□□□□□ -0.66
Dclk1-208	ENSMUST00000198437	Synj1	Q8CHC4	1574 aa		10.93	□□□□□ -0.66
Dclk1-208	ENSMUST00000198437	Mier1	Q5UAK0	511 aa		10.92	□□□□□ -0.66
Dclk1-208	ENSMUST00000198437	Mrc2	Q64449	1479 aa		10.91	□□□□□ -0.66
Dclk1-208	ENSMUST00000198437	Gm38655	A0A286YDK6	273 aa		10.9	□□□□□ -0.66
Dclk1-208	ENSMUST00000198437	Aebp2	Q9Z248	504 aa	Known RBP	10.86	□□□□□ -0.67
Dclk1-208	ENSMUST00000198437	Gtf3c3	Q3TMP1	882 aa		10.84	□□□□□ -0.67
Dclk1-208	ENSMUST00000198437	Fmn1	Q05860	1466 aa		10.83	□□□□□ -0.68
Dclk1-208	ENSMUST00000198437	Cux2	P70298	1426 aa		10.82	□□□□□ -0.68
Dclk1-208	ENSMUST00000198437	Upf2	A2AT37	1269 aa	Known RBP	10.81	□□□□□ -0.68
Dclk1-208	ENSMUST00000198437	Hnrnpul2	Q00PI9	745 aa	Known RBP	10.8	□□□□□ -0.68
Dclk1-208	ENSMUST00000198437	Il27	Q8K3I6	234 aa		10.8	□□□□□ -0.68
Dclk1-208	ENSMUST00000198437	Safb	D3YXK2	937 aa	Known RBP	10.77	□□□□□ -0.69
Dclk1-208	ENSMUST00000198437	Npm2	Q80W85	207 aa		10.77	□□□□□ -0.69
Dclk1-208	ENSMUST00000198437	Mapk8ip2	Q9ERE9	830 aa		10.75	□□□□□ -0.69
Dclk1-208	ENSMUST00000198437	Ipo4	Q8VI75	1082 aa		10.74	□□□□□ -0.69
Dclk1-208	ENSMUST00000198437	Wdr66	E9Q743	1299 aa		10.73	□□□□□ -0.69
Dclk1-208	ENSMUST00000198437	Lamc3	Q9R0B6	1581 aa		10.73	□□□□□ -0.69
Dclk1-208	ENSMUST00000198437	Irx3	P81067	507 aa		10.72	□□□□□ -0.69
Dclk1-208	ENSMUST00000198437	Dnajc5b	Q9CQ94	199 aa		10.72	□□□□□ -0.69

Retrieved 100 of 22,080 RNA–protein pairs in 135.9 ms