RNA–Protein interactions for RNA: ENSMUST00000198381.4

Pdlim5-211, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Pdlim5, Length 1,555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-211ENSMUST00000198381 Gm35339A0A140LHH9 1649 aa39.34■■■■□ 3.89
Pdlim5-211ENSMUST00000198381 NischQ80TM9 1593 aa38.7■■■■□ 3.79
Pdlim5-211ENSMUST00000198381 Abcc9P70170 1546 aa37.52■■■■□ 3.6
Pdlim5-211ENSMUST00000198381 Abcc8B2RUS7 1588 aa37.47■■■■□ 3.59
Pdlim5-211ENSMUST00000198381 ScribQ80U72 1612 aa36.22■■■■□ 3.39
Pdlim5-211ENSMUST00000198381 Kdm5dQ62240 1548 aa34.96■■■■□ 3.19
Pdlim5-211ENSMUST00000198381 NacadQ5SWP3 1504 aa34.93■■■■□ 3.18
Pdlim5-211ENSMUST00000198381 Dcaf1Q80TR8 1506 aa34.46■■■■□ 3.11
Pdlim5-211ENSMUST00000198381 Sycp2Q9CUU3 1500 aa34.28■■■■□ 3.08
Pdlim5-211ENSMUST00000198381 BicraF8VPZ9 1578 aa33.88■■■■□ 3.01
Pdlim5-211ENSMUST00000198381 Rb1cc1Q9ESK9 1588 aa33.76■■■□□ 2.99
Pdlim5-211ENSMUST00000198381 Baz1aO88379 1555 aa33.26■■■□□ 2.92
Pdlim5-211ENSMUST00000198381 Ccdc180J3QNE4 1664 aa33.26■■■□□ 2.92
Pdlim5-211ENSMUST00000198381 Rhox8Q6VSS7 320 aa33.21■■■□□ 2.91
Pdlim5-211ENSMUST00000198381 Crybg2B7ZCC2 1516 aa33.08■■■□□ 2.89
Pdlim5-211ENSMUST00000198381 Dnajc5bQ9CQ94 199 aa32.87■■■□□ 2.85
Pdlim5-211ENSMUST00000198381 Pds5bQ4VA53 1446 aaKnown RBP32.78■■■□□ 2.84
Pdlim5-211ENSMUST00000198381 Zcchc6Q5BLK4 1491 aaKnown RBP32.71■■■□□ 2.83
Pdlim5-211ENSMUST00000198381 Thoc2B1AZI6 1594 aaKnown RBP32.66■■■□□ 2.82
Pdlim5-211ENSMUST00000198381 Atad2bE9Q166 1460 aaKnown RBP32.5■■■□□ 2.79
Pdlim5-211ENSMUST00000198381 Smarca2Q6DIC0 1577 aa32.33■■■□□ 2.77
Pdlim5-211ENSMUST00000198381 Smarca4Q3TKT4 1613 aaKnown RBP32.28■■■□□ 2.76
Pdlim5-211ENSMUST00000198381 Cecr2E9Q2Z1 1453 aa32.21■■■□□ 2.75
Pdlim5-211ENSMUST00000198381 Iqgap2Q3UQ44 1575 aa32.12■■■□□ 2.73
Pdlim5-211ENSMUST00000198381 Ercc6F8VPZ5 1481 aa32.1■■■□□ 2.73
Pdlim5-211ENSMUST00000198381 Cc2d2aQ8CFW7 1633 aa32.07■■■□□ 2.72
Pdlim5-211ENSMUST00000198381 Fam135aQ6NS59 1506 aa31.89■■■□□ 2.7
Pdlim5-211ENSMUST00000198381 Wdr62Q3U3T8 1523 aa31.86■■■□□ 2.69
Pdlim5-211ENSMUST00000198381 Frmpd1A2AKB4 1549 aa31.79■■■□□ 2.68
Pdlim5-211ENSMUST00000198381 Rtl1Q7M732 1744 aa31.77■■■□□ 2.68
Pdlim5-211ENSMUST00000198381 Phldb1Q6PDH0 1371 aaKnown RBP31.53■■■□□ 2.64
Pdlim5-211ENSMUST00000198381 CftrP26361 1476 aa31.46■■■□□ 2.63
Pdlim5-211ENSMUST00000198381 Unc13aQ4KUS2 1712 aa31.45■■■□□ 2.63
Pdlim5-211ENSMUST00000198381 Cttnbp2B9EJA2 1648 aa31.44■■■□□ 2.62
Pdlim5-211ENSMUST00000198381 Synj1Q8CHC4 1574 aa31.42■■■□□ 2.62
Pdlim5-211ENSMUST00000198381 Baz1bQ9Z277 1479 aa31.42■■■□□ 2.62
Pdlim5-211ENSMUST00000198381 Brd4Q9ESU6 1400 aaKnown RBP31.28■■■□□ 2.6
Pdlim5-211ENSMUST00000198381 Ubl4bQ9CQ84 188 aa31.14■■■□□ 2.58
Pdlim5-211ENSMUST00000198381 Ccdc136Q3TVA9 1136 aa31.12■■■□□ 2.57
Pdlim5-211ENSMUST00000198381 Mrc2Q64449 1479 aa31.08■■■□□ 2.57
Pdlim5-211ENSMUST00000198381 Esf1Q3V1V3 845 aaKnown RBP30.66■■■□□ 2.5
Pdlim5-211ENSMUST00000198381 Rsf1E9PWW9 1441 aaKnown RBP30.62■■■□□ 2.49
Pdlim5-211ENSMUST00000198381 Trim41Q5NCC3 630 aa30.58■■■□□ 2.49
Pdlim5-211ENSMUST00000198381 Cux2P70298 1426 aa30.57■■■□□ 2.48
Pdlim5-211ENSMUST00000198381 Kif15Q6P9L6 1387 aa30.57■■■□□ 2.48
Pdlim5-211ENSMUST00000198381 Lamc3Q9R0B6 1581 aa30.55■■■□□ 2.48
Pdlim5-211ENSMUST00000198381 Lrriq1Q0P5X1 1673 aa30.46■■■□□ 2.47
Pdlim5-211ENSMUST00000198381 Kif21aQ9QXL2 1672 aa30.44■■■□□ 2.46
Pdlim5-211ENSMUST00000198381 Top2bQ64511 1612 aa30.29■■■□□ 2.44
Pdlim5-211ENSMUST00000198381 TnnQ80Z71 1560 aa30.27■■■□□ 2.44
Pdlim5-211ENSMUST00000198381 Golga3P55937 1487 aa30.22■■■□□ 2.43
Pdlim5-211ENSMUST00000198381 Npm1Q61937 292 aaKnown RBP30.1■■■□□ 2.41
Pdlim5-211ENSMUST00000198381 Cep164Q5DU05 1446 aa30.1■■■□□ 2.41
Pdlim5-211ENSMUST00000198381 Camsap1A2AHC3 1581 aa30.02■■■□□ 2.4
Pdlim5-211ENSMUST00000198381 Eif4g3Q80XI3 1579 aaKnown RBP30.02■■■□□ 2.4
Pdlim5-211ENSMUST00000198381 Ccdc18Q640L5 1455 aa29.99■■■□□ 2.39
Pdlim5-211ENSMUST00000198381 Cngb1E1AZ71 1325 aa29.96■■■□□ 2.39
Pdlim5-211ENSMUST00000198381 Dhx29Q6PGC1 1365 aaKnown RBP29.94■■■□□ 2.38
Pdlim5-211ENSMUST00000198381 Urb2E9Q7L1 1524 aaKnown RBP29.94■■■□□ 2.38
Pdlim5-211ENSMUST00000198381 Fmn1Q05860 1466 aa29.89■■■□□ 2.37
Pdlim5-211ENSMUST00000198381 LrpprcQ6PB66 1392 aaKnown RBP29.86■■■□□ 2.37
Pdlim5-211ENSMUST00000198381 Plb1Q3TTY0 1478 aa29.86■■■□□ 2.37
Pdlim5-211ENSMUST00000198381 Crocc2F6XLV1 1638 aa29.84■■■□□ 2.37
Pdlim5-211ENSMUST00000198381 Il27Q8K3I6 234 aa29.84■■■□□ 2.37
Pdlim5-211ENSMUST00000198381 PogzQ8BZH4 1409 aaKnown RBP29.73■■■□□ 2.35
Pdlim5-211ENSMUST00000198381 Dnajc5P60904 198 aa29.64■■■□□ 2.33
Pdlim5-211ENSMUST00000198381 Shroom2A2ALU4 1481 aa29.61■■■□□ 2.33
Pdlim5-211ENSMUST00000198381 Duox2A2AQ99 1517 aa29.58■■■□□ 2.33
Pdlim5-211ENSMUST00000198381 Grin2bQ01097 1482 aa29.58■■■□□ 2.33
Pdlim5-211ENSMUST00000198381 Ift140E9PY46 1464 aa29.57■■■□□ 2.32
Pdlim5-211ENSMUST00000198381 Rusc2Q80U22 1514 aa29.55■■■□□ 2.32
Pdlim5-211ENSMUST00000198381 Ccdc88bQ4QRL3 1481 aa29.46■■■□□ 2.31
Pdlim5-211ENSMUST00000198381 Samd9lQ69Z37 1561 aa29.46■■■□□ 2.31
Pdlim5-211ENSMUST00000198381 Disp1Q3TDN0 1521 aa29.4■■■□□ 2.3
Pdlim5-211ENSMUST00000198381 Top2aQ01320 1528 aaKnown RBP29.37■■■□□ 2.29
Pdlim5-211ENSMUST00000198381 Setd1bQ8CFT2 1985 aa29.34■■■□□ 2.29
Pdlim5-211ENSMUST00000198381 Efcab5A0JP43 1406 aa29.31■■■□□ 2.28
Pdlim5-211ENSMUST00000198381 Pbrm1Q8BSQ9 1634 aaKnown RBP29.3■■■□□ 2.28
Pdlim5-211ENSMUST00000198381 Nup160Q9Z0W3 1402 aaKnown RBP29.29■■■□□ 2.28
Pdlim5-211ENSMUST00000198381 NrkQ9R0G8 1455 aa29.22■■■□□ 2.27
Pdlim5-211ENSMUST00000198381 Col17a1Q07563 1470 aa29.19■■■□□ 2.26
Pdlim5-211ENSMUST00000198381 Cc2d2bA0A286YDU8 1405 aa29.17■■■□□ 2.26
Pdlim5-211ENSMUST00000198381 Rad54l2Q99NG0 1466 aa29.17■■■□□ 2.26
Pdlim5-211ENSMUST00000198381 Chic1Q8CBW7 227 aa29.16■■■□□ 2.26
Pdlim5-211ENSMUST00000198381 Magi3Q9EQJ9 1476 aa29.15■■■□□ 2.26
Pdlim5-211ENSMUST00000198381 Pabpn1Q8CCS6 302 aaKnown RBP29.14■■■□□ 2.26
Pdlim5-211ENSMUST00000198381 Grin2aP35436 1464 aa29.12■■■□□ 2.25
Pdlim5-211ENSMUST00000198381 PtprkP35822 1457 aa29.12■■■□□ 2.25
Pdlim5-211ENSMUST00000198381 Shroom4Q1W617 1475 aa29.1■■■□□ 2.25
Pdlim5-211ENSMUST00000198381 Gpatch8A2A6A1 1505 aa29.06■■■□□ 2.24
Pdlim5-211ENSMUST00000198381 AqrQ8CFQ3 1481 aaKnown RBP29.03■■■□□ 2.24
Pdlim5-211ENSMUST00000198381 SynmQ70IV5 1561 aa28.98■■■□□ 2.23
Pdlim5-211ENSMUST00000198381 Pla2r1Q62028 1487 aa28.98■■■□□ 2.23
Pdlim5-211ENSMUST00000198381 Pelp1Q9DBD5 1123 aaKnown RBP28.97■■■□□ 2.23
Pdlim5-211ENSMUST00000198381 Zcchc11B2RX14 1644 aaKnown RBP28.92■■■□□ 2.22
Pdlim5-211ENSMUST00000198381 Fgd6Q69ZL1 1399 aa28.84■■■□□ 2.21
Pdlim5-211ENSMUST00000198381 Mroh2bQ7M6Y6 1581 aa28.7■■■□□ 2.18
Pdlim5-211ENSMUST00000198381 Abca16E9PWJ7 1678 aa28.68■■■□□ 2.18
Pdlim5-211ENSMUST00000198381 Cep170Q6A065 1588 aa28.68■■■□□ 2.18
Pdlim5-211ENSMUST00000198381 Gapvd1Q6PAR5 1458 aa28.66■■■□□ 2.18
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms