RNA–Protein interactions for RNA: ENSMUST00000186659.6

Tubgcp4-215, Transcript of Gamma-tubulin complex component 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Tubgcp4, Length 2,915 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4-215ENSMUST00000186659 NischQ80TM9 1593 aa29.65■■■□□ 2.34
Tubgcp4-215ENSMUST00000186659 Gm35339A0A140LHH9 1649 aa28.88■■■□□ 2.21
Tubgcp4-215ENSMUST00000186659 Abcc9P70170 1546 aa28.57■■■□□ 2.16
Tubgcp4-215ENSMUST00000186659 Abcc8B2RUS7 1588 aa28.22■■■□□ 2.11
Tubgcp4-215ENSMUST00000186659 Rhox8Q6VSS7 320 aa27.7■■■□□ 2.02
Tubgcp4-215ENSMUST00000186659 ScribQ80U72 1612 aa26.64■■□□□ 1.86
Tubgcp4-215ENSMUST00000186659 Kdm5dQ62240 1548 aa26.09■■□□□ 1.77
Tubgcp4-215ENSMUST00000186659 Rb1cc1Q9ESK9 1588 aa25.94■■□□□ 1.74
Tubgcp4-215ENSMUST00000186659 NacadQ5SWP3 1504 aa25.84■■□□□ 1.73
Tubgcp4-215ENSMUST00000186659 Dcaf1Q80TR8 1506 aa25.81■■□□□ 1.72
Tubgcp4-215ENSMUST00000186659 Ccdc136Q3TVA9 1136 aa25.81■■□□□ 1.72
Tubgcp4-215ENSMUST00000186659 Zcchc6Q5BLK4 1491 aaKnown RBP25.53■■□□□ 1.68
Tubgcp4-215ENSMUST00000186659 Baz1aO88379 1555 aa25.48■■□□□ 1.67
Tubgcp4-215ENSMUST00000186659 Rtl1Q7M732 1744 aa25.43■■□□□ 1.66
Tubgcp4-215ENSMUST00000186659 Sycp2Q9CUU3 1500 aa25.31■■□□□ 1.64
Tubgcp4-215ENSMUST00000186659 Ccdc180J3QNE4 1664 aa25.09■■□□□ 1.61
Tubgcp4-215ENSMUST00000186659 BicraF8VPZ9 1578 aa24.89■■□□□ 1.57
Tubgcp4-215ENSMUST00000186659 Crybg2B7ZCC2 1516 aa24.82■■□□□ 1.56
Tubgcp4-215ENSMUST00000186659 Smarca2Q6DIC0 1577 aa24.82■■□□□ 1.56
Tubgcp4-215ENSMUST00000186659 Trim41Q5NCC3 630 aa24.8■■□□□ 1.56
Tubgcp4-215ENSMUST00000186659 Cecr2E9Q2Z1 1453 aa24.79■■□□□ 1.56
Tubgcp4-215ENSMUST00000186659 Cngb1E1AZ71 1325 aa24.67■■□□□ 1.54
Tubgcp4-215ENSMUST00000186659 Esf1Q3V1V3 845 aaKnown RBP24.57■■□□□ 1.52
Tubgcp4-215ENSMUST00000186659 Brd4Q9ESU6 1400 aaKnown RBP24.36■■□□□ 1.49
Tubgcp4-215ENSMUST00000186659 Synj1Q8CHC4 1574 aa24.3■■□□□ 1.48
Tubgcp4-215ENSMUST00000186659 Ehmt2Q9Z148 1263 aaKnown RBP24.26■■□□□ 1.47
Tubgcp4-215ENSMUST00000186659 HrcG5E8J6 738 aa24.26■■□□□ 1.47
Tubgcp4-215ENSMUST00000186659 Gab3Q8BSM5 595 aa24.22■■□□□ 1.47
Tubgcp4-215ENSMUST00000186659 Chic1Q8CBW7 227 aa24.21■■□□□ 1.47
Tubgcp4-215ENSMUST00000186659 CftrP26361 1476 aa24.17■■□□□ 1.46
Tubgcp4-215ENSMUST00000186659 Smarca4Q3TKT4 1613 aaKnown RBP24.09■■□□□ 1.45
Tubgcp4-215ENSMUST00000186659 Rsf1E9PWW9 1441 aaKnown RBP23.97■■□□□ 1.43
Tubgcp4-215ENSMUST00000186659 Golga3P55937 1487 aa23.95■■□□□ 1.42
Tubgcp4-215ENSMUST00000186659 Ccdc88bQ4QRL3 1481 aa23.93■■□□□ 1.42
Tubgcp4-215ENSMUST00000186659 Iqgap2Q3UQ44 1575 aa23.91■■□□□ 1.42
Tubgcp4-215ENSMUST00000186659 Atad2bE9Q166 1460 aaKnown RBP23.89■■□□□ 1.42
Tubgcp4-215ENSMUST00000186659 Pds5bQ4VA53 1446 aaKnown RBP23.89■■□□□ 1.41
Tubgcp4-215ENSMUST00000186659 Cttnbp2B9EJA2 1648 aa23.87■■□□□ 1.41
Tubgcp4-215ENSMUST00000186659 Cep164Q5DU05 1446 aa23.76■■□□□ 1.39
Tubgcp4-215ENSMUST00000186659 Il27Q8K3I6 234 aa23.73■■□□□ 1.39
Tubgcp4-215ENSMUST00000186659 Cc2d2aQ8CFW7 1633 aa23.6■■□□□ 1.37
Tubgcp4-215ENSMUST00000186659 Frmpd1A2AKB4 1549 aa23.59■■□□□ 1.37
Tubgcp4-215ENSMUST00000186659 Ercc6F8VPZ5 1481 aa23.55■■□□□ 1.36
Tubgcp4-215ENSMUST00000186659 Top2bQ64511 1612 aa23.52■■□□□ 1.36
Tubgcp4-215ENSMUST00000186659 Dnajc5bQ9CQ94 199 aa23.49■■□□□ 1.35
Tubgcp4-215ENSMUST00000186659 Myt1lP97500 1187 aa23.48■■□□□ 1.35
Tubgcp4-215ENSMUST00000186659 Wdr62Q3U3T8 1523 aa23.45■■□□□ 1.34
Tubgcp4-215ENSMUST00000186659 Npm2Q80W85 207 aa23.43■■□□□ 1.34
Tubgcp4-215ENSMUST00000186659 Ubl4bQ9CQ84 188 aa23.43■■□□□ 1.34
Tubgcp4-215ENSMUST00000186659 Kif15Q6P9L6 1387 aa23.41■■□□□ 1.34
Tubgcp4-215ENSMUST00000186659 Fmn1Q05860 1466 aa23.34■■□□□ 1.33
Tubgcp4-215ENSMUST00000186659 Phldb1Q6PDH0 1371 aaKnown RBP23.18■■□□□ 1.3
Tubgcp4-215ENSMUST00000186659 Zeb1Q64318 1117 aa23.17■■□□□ 1.3
Tubgcp4-215ENSMUST00000186659 Thoc2B1AZI6 1594 aaKnown RBP23.15■■□□□ 1.3
Tubgcp4-215ENSMUST00000186659 Unc13aQ4KUS2 1712 aa23.13■■□□□ 1.29
Tubgcp4-215ENSMUST00000186659 Npm1Q61937 292 aaKnown RBP23.12■■□□□ 1.29
Tubgcp4-215ENSMUST00000186659 Top2aQ01320 1528 aaKnown RBP23.1■■□□□ 1.29
Tubgcp4-215ENSMUST00000186659 Cux2P70298 1426 aa23.07■■□□□ 1.28
Tubgcp4-215ENSMUST00000186659 Rapgef2Q8CHG7 1496 aa23.07■■□□□ 1.28
Tubgcp4-215ENSMUST00000186659 Lamc3Q9R0B6 1581 aa22.98■■□□□ 1.27
Tubgcp4-215ENSMUST00000186659 PtprkP35822 1457 aa22.98■■□□□ 1.27
Tubgcp4-215ENSMUST00000186659 Ap3b1Q9Z1T1 1105 aa22.96■■□□□ 1.27
Tubgcp4-215ENSMUST00000186659 Acin1Q9JIX8 1338 aaKnown RBP22.94■■□□□ 1.26
Tubgcp4-215ENSMUST00000186659 Cep162Q6ZQ06 1403 aa22.93■■□□□ 1.26
Tubgcp4-215ENSMUST00000186659 TnnQ80Z71 1560 aa22.93■■□□□ 1.26
Tubgcp4-215ENSMUST00000186659 Ccdc18Q640L5 1455 aa22.9■■□□□ 1.26
Tubgcp4-215ENSMUST00000186659 UbtfP25976 765 aaKnown RBP22.89■■□□□ 1.25
Tubgcp4-215ENSMUST00000186659 Camsap1A2AHC3 1581 aa22.84■■□□□ 1.25
Tubgcp4-215ENSMUST00000186659 Fam135aQ6NS59 1506 aa22.81■■□□□ 1.24
Tubgcp4-215ENSMUST00000186659 Plekhg3Q4VAC9 1341 aa22.81■■□□□ 1.24
Tubgcp4-215ENSMUST00000186659 LrpprcQ6PB66 1392 aaKnown RBP22.71■■□□□ 1.23
Tubgcp4-215ENSMUST00000186659 Grin2bQ01097 1482 aa22.7■■□□□ 1.22
Tubgcp4-215ENSMUST00000186659 Clip1Q922J3 1391 aa22.67■■□□□ 1.22
Tubgcp4-215ENSMUST00000186659 Arhgap35Q91YM2 1499 aa22.66■■□□□ 1.22
Tubgcp4-215ENSMUST00000186659 Dhx29Q6PGC1 1365 aaKnown RBP22.65■■□□□ 1.22
Tubgcp4-215ENSMUST00000186659 Shroom4Q1W617 1475 aa22.64■■□□□ 1.21
Tubgcp4-215ENSMUST00000186659 Baz1bQ9Z277 1479 aa22.64■■□□□ 1.21
Tubgcp4-215ENSMUST00000186659 Mier1Q5UAK0 511 aa22.6■■□□□ 1.21
Tubgcp4-215ENSMUST00000186659 Mrc2Q64449 1479 aa22.58■■□□□ 1.2
Tubgcp4-215ENSMUST00000186659 Duox2A2AQ99 1517 aa22.57■■□□□ 1.2
Tubgcp4-215ENSMUST00000186659 NrkQ9R0G8 1455 aa22.56■■□□□ 1.2
Tubgcp4-215ENSMUST00000186659 PogzQ8BZH4 1409 aaKnown RBP22.54■■□□□ 1.2
Tubgcp4-215ENSMUST00000186659 Rpgrip1Q9EPQ2 1331 aa22.53■■□□□ 1.2
Tubgcp4-215ENSMUST00000186659 Lmod2Q3UHZ5 550 aa22.51■■□□□ 1.19
Tubgcp4-215ENSMUST00000186659 Rad54l2Q99NG0 1466 aa22.51■■□□□ 1.19
Tubgcp4-215ENSMUST00000186659 Setd5Q5XJV7 1441 aa22.5■■□□□ 1.19
Tubgcp4-215ENSMUST00000186659 Kif21aQ9QXL2 1672 aa22.45■■□□□ 1.18
Tubgcp4-215ENSMUST00000186659 Eif4g1Q6NZJ6 1600 aaKnown RBP22.42■■□□□ 1.18
Tubgcp4-215ENSMUST00000186659 Efcab5A0JP43 1406 aa22.42■■□□□ 1.18
Tubgcp4-215ENSMUST00000186659 Mroh2bQ7M6Y6 1581 aa22.42■■□□□ 1.18
Tubgcp4-215ENSMUST00000186659 Eea1Q8BL66 1411 aa22.38■■□□□ 1.17
Tubgcp4-215ENSMUST00000186659 Plb1Q3TTY0 1478 aa22.37■■□□□ 1.17
Tubgcp4-215ENSMUST00000186659 Samd9lQ69Z37 1561 aa22.37■■□□□ 1.17
Tubgcp4-215ENSMUST00000186659 Arap1Q4LDD4 1452 aa22.33■■□□□ 1.16
Tubgcp4-215ENSMUST00000186659 Crocc2F6XLV1 1638 aa22.3■■□□□ 1.16
Tubgcp4-215ENSMUST00000186659 Urb2E9Q7L1 1524 aaKnown RBP22.29■■□□□ 1.16
Tubgcp4-215ENSMUST00000186659 Carmil1Q6EDY6 1374 aa22.24■■□□□ 1.15
Tubgcp4-215ENSMUST00000186659 BlmO88700 1416 aa22.23■■□□□ 1.15
Tubgcp4-215ENSMUST00000186659 Map3k1P53349 1493 aa22.23■■□□□ 1.15
Tubgcp4-215ENSMUST00000186659 Cux1P53564 1515 aa22.22■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms