RNA–Protein interactions for RNA: ENSMUST00000180097.1

Trav9n-2-201, Transcript of T cell receptor alpha variable 9D-2 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav9n-2, Length 337 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2-201ENSMUST00000180097 Gm35339A0A140LHH9 1649 aa18■□□□□ 0.47
Trav9n-2-201ENSMUST00000180097 NischQ80TM9 1593 aa17.79■□□□□ 0.44
Trav9n-2-201ENSMUST00000180097 Abcc8B2RUS7 1588 aa17.22■□□□□ 0.35
Trav9n-2-201ENSMUST00000180097 Abcc9P70170 1546 aa17.18■□□□□ 0.34
Trav9n-2-201ENSMUST00000180097 ScribQ80U72 1612 aa16.52■□□□□ 0.24
Trav9n-2-201ENSMUST00000180097 NacadQ5SWP3 1504 aa16.15■□□□□ 0.18
Trav9n-2-201ENSMUST00000180097 Kdm5dQ62240 1548 aa16.02■□□□□ 0.15
Trav9n-2-201ENSMUST00000180097 Dcaf1Q80TR8 1506 aa15.93■□□□□ 0.14
Trav9n-2-201ENSMUST00000180097 Sycp2Q9CUU3 1500 aa15.82■□□□□ 0.12
Trav9n-2-201ENSMUST00000180097 BicraF8VPZ9 1578 aa15.53■□□□□ 0.08
Trav9n-2-201ENSMUST00000180097 Rb1cc1Q9ESK9 1588 aa15.45■□□□□ 0.06
Trav9n-2-201ENSMUST00000180097 Crybg2B7ZCC2 1516 aa15.4■□□□□ 0.06
Trav9n-2-201ENSMUST00000180097 Rhox8Q6VSS7 320 aa15.33■□□□□ 0.04
Trav9n-2-201ENSMUST00000180097 Ccdc180J3QNE4 1664 aa15.29■□□□□ 0.04
Trav9n-2-201ENSMUST00000180097 Baz1aO88379 1555 aa15.28■□□□□ 0.04
Trav9n-2-201ENSMUST00000180097 Pds5bQ4VA53 1446 aaKnown RBP15.26■□□□□ 0.03
Trav9n-2-201ENSMUST00000180097 Dnajc5bQ9CQ94 199 aa15.2■□□□□ 0.02
Trav9n-2-201ENSMUST00000180097 Atad2bE9Q166 1460 aaKnown RBP15.08■□□□□ 0
Trav9n-2-201ENSMUST00000180097 Zcchc6Q5BLK4 1491 aaKnown RBP15.03■□□□□ -0
Trav9n-2-201ENSMUST00000180097 Thoc2B1AZI6 1594 aaKnown RBP15□□□□□ -0.01
Trav9n-2-201ENSMUST00000180097 Ercc6F8VPZ5 1481 aa14.85□□□□□ -0.03
Trav9n-2-201ENSMUST00000180097 Smarca4Q3TKT4 1613 aaKnown RBP14.84□□□□□ -0.03
Trav9n-2-201ENSMUST00000180097 Smarca2Q6DIC0 1577 aa14.84□□□□□ -0.03
Trav9n-2-201ENSMUST00000180097 Cecr2E9Q2Z1 1453 aa14.77□□□□□ -0.04
Trav9n-2-201ENSMUST00000180097 Iqgap2Q3UQ44 1575 aa14.76□□□□□ -0.05
Trav9n-2-201ENSMUST00000180097 Cc2d2aQ8CFW7 1633 aa14.75□□□□□ -0.05
Trav9n-2-201ENSMUST00000180097 Baz1bQ9Z277 1479 aa14.71□□□□□ -0.05
Trav9n-2-201ENSMUST00000180097 Fam135aQ6NS59 1506 aa14.69□□□□□ -0.06
Trav9n-2-201ENSMUST00000180097 Phldb1Q6PDH0 1371 aaKnown RBP14.69□□□□□ -0.06
Trav9n-2-201ENSMUST00000180097 Frmpd1A2AKB4 1549 aa14.66□□□□□ -0.06
Trav9n-2-201ENSMUST00000180097 Wdr62Q3U3T8 1523 aa14.66□□□□□ -0.06
Trav9n-2-201ENSMUST00000180097 Ubl4bQ9CQ84 188 aa14.56□□□□□ -0.08
Trav9n-2-201ENSMUST00000180097 Brd4Q9ESU6 1400 aaKnown RBP14.49□□□□□ -0.09
Trav9n-2-201ENSMUST00000180097 CftrP26361 1476 aa14.49□□□□□ -0.09
Trav9n-2-201ENSMUST00000180097 Rtl1Q7M732 1744 aa14.41□□□□□ -0.1
Trav9n-2-201ENSMUST00000180097 Cttnbp2B9EJA2 1648 aa14.41□□□□□ -0.1
Trav9n-2-201ENSMUST00000180097 Mrc2Q64449 1479 aa14.38□□□□□ -0.11
Trav9n-2-201ENSMUST00000180097 Ccdc136Q3TVA9 1136 aa14.37□□□□□ -0.11
Trav9n-2-201ENSMUST00000180097 Synj1Q8CHC4 1574 aa14.36□□□□□ -0.11
Trav9n-2-201ENSMUST00000180097 Trim41Q5NCC3 630 aa14.3□□□□□ -0.12
Trav9n-2-201ENSMUST00000180097 Esf1Q3V1V3 845 aaKnown RBP14.28□□□□□ -0.12
Trav9n-2-201ENSMUST00000180097 Unc13aQ4KUS2 1712 aa14.28□□□□□ -0.12
Trav9n-2-201ENSMUST00000180097 Rsf1E9PWW9 1441 aaKnown RBP14.21□□□□□ -0.13
Trav9n-2-201ENSMUST00000180097 Kif15Q6P9L6 1387 aa14.15□□□□□ -0.14
Trav9n-2-201ENSMUST00000180097 Cux2P70298 1426 aa14.15□□□□□ -0.14
Trav9n-2-201ENSMUST00000180097 Npm1Q61937 292 aaKnown RBP14.08□□□□□ -0.16
Trav9n-2-201ENSMUST00000180097 Lamc3Q9R0B6 1581 aa14.05□□□□□ -0.16
Trav9n-2-201ENSMUST00000180097 Cep164Q5DU05 1446 aa13.98□□□□□ -0.17
Trav9n-2-201ENSMUST00000180097 Lrriq1Q0P5X1 1673 aa13.95□□□□□ -0.18
Trav9n-2-201ENSMUST00000180097 Dnajc5P60904 198 aa13.93□□□□□ -0.18
Trav9n-2-201ENSMUST00000180097 Golga3P55937 1487 aa13.92□□□□□ -0.18
Trav9n-2-201ENSMUST00000180097 Ccdc18Q640L5 1455 aa13.92□□□□□ -0.18
Trav9n-2-201ENSMUST00000180097 Kif21aQ9QXL2 1672 aa13.9□□□□□ -0.18
Trav9n-2-201ENSMUST00000180097 LrpprcQ6PB66 1392 aaKnown RBP13.86□□□□□ -0.19
Trav9n-2-201ENSMUST00000180097 Dhx29Q6PGC1 1365 aaKnown RBP13.84□□□□□ -0.19
Trav9n-2-201ENSMUST00000180097 TnnQ80Z71 1560 aa13.84□□□□□ -0.19
Trav9n-2-201ENSMUST00000180097 Top2bQ64511 1612 aa13.82□□□□□ -0.2
Trav9n-2-201ENSMUST00000180097 Il27Q8K3I6 234 aa13.81□□□□□ -0.2
Trav9n-2-201ENSMUST00000180097 Cngb1E1AZ71 1325 aa13.81□□□□□ -0.2
Trav9n-2-201ENSMUST00000180097 Eif4g3Q80XI3 1579 aaKnown RBP13.8□□□□□ -0.2
Trav9n-2-201ENSMUST00000180097 Plb1Q3TTY0 1478 aa13.79□□□□□ -0.2
Trav9n-2-201ENSMUST00000180097 Urb2E9Q7L1 1524 aaKnown RBP13.79□□□□□ -0.2
Trav9n-2-201ENSMUST00000180097 Fmn1Q05860 1466 aa13.78□□□□□ -0.2
Trav9n-2-201ENSMUST00000180097 Shroom2A2ALU4 1481 aa13.76□□□□□ -0.21
Trav9n-2-201ENSMUST00000180097 Camsap1A2AHC3 1581 aa13.75□□□□□ -0.21
Trav9n-2-201ENSMUST00000180097 PogzQ8BZH4 1409 aaKnown RBP13.74□□□□□ -0.21
Trav9n-2-201ENSMUST00000180097 Ift140E9PY46 1464 aa13.72□□□□□ -0.21
Trav9n-2-201ENSMUST00000180097 Crocc2F6XLV1 1638 aa13.71□□□□□ -0.22
Trav9n-2-201ENSMUST00000180097 Pabpn1Q8CCS6 302 aaKnown RBP13.68□□□□□ -0.22
Trav9n-2-201ENSMUST00000180097 Duox2A2AQ99 1517 aa13.66□□□□□ -0.22
Trav9n-2-201ENSMUST00000180097 Efcab5A0JP43 1406 aa13.64□□□□□ -0.23
Trav9n-2-201ENSMUST00000180097 Grin2bQ01097 1482 aa13.61□□□□□ -0.23
Trav9n-2-201ENSMUST00000180097 Disp1Q3TDN0 1521 aa13.59□□□□□ -0.23
Trav9n-2-201ENSMUST00000180097 Rusc2Q80U22 1514 aa13.59□□□□□ -0.23
Trav9n-2-201ENSMUST00000180097 Cc2d2bA0A286YDU8 1405 aa13.57□□□□□ -0.24
Trav9n-2-201ENSMUST00000180097 Col17a1Q07563 1470 aa13.55□□□□□ -0.24
Trav9n-2-201ENSMUST00000180097 Nup160Q9Z0W3 1402 aaKnown RBP13.53□□□□□ -0.24
Trav9n-2-201ENSMUST00000180097 NrkQ9R0G8 1455 aa13.52□□□□□ -0.25
Trav9n-2-201ENSMUST00000180097 Pelp1Q9DBD5 1123 aaKnown RBP13.48□□□□□ -0.25
Trav9n-2-201ENSMUST00000180097 Pbrm1Q8BSQ9 1634 aaKnown RBP13.48□□□□□ -0.25
Trav9n-2-201ENSMUST00000180097 Ccdc88bQ4QRL3 1481 aa13.47□□□□□ -0.25
Trav9n-2-201ENSMUST00000180097 Top2aQ01320 1528 aaKnown RBP13.44□□□□□ -0.26
Trav9n-2-201ENSMUST00000180097 Samd9lQ69Z37 1561 aa13.44□□□□□ -0.26
Trav9n-2-201ENSMUST00000180097 Zcchc11B2RX14 1644 aaKnown RBP13.43□□□□□ -0.26
Trav9n-2-201ENSMUST00000180097 Fgd6Q69ZL1 1399 aa13.43□□□□□ -0.26
Trav9n-2-201ENSMUST00000180097 Grin2aP35436 1464 aa13.41□□□□□ -0.26
Trav9n-2-201ENSMUST00000180097 Rad54l2Q99NG0 1466 aa13.41□□□□□ -0.26
Trav9n-2-201ENSMUST00000180097 Chic1Q8CBW7 227 aa13.4□□□□□ -0.26
Trav9n-2-201ENSMUST00000180097 AqrQ8CFQ3 1481 aaKnown RBP13.4□□□□□ -0.26
Trav9n-2-201ENSMUST00000180097 Shroom4Q1W617 1475 aa13.38□□□□□ -0.27
Trav9n-2-201ENSMUST00000180097 Magi3Q9EQJ9 1476 aa13.38□□□□□ -0.27
Trav9n-2-201ENSMUST00000180097 PtprkP35822 1457 aa13.34□□□□□ -0.27
Trav9n-2-201ENSMUST00000180097 Setd1bQ8CFT2 1985 aa13.34□□□□□ -0.27
Trav9n-2-201ENSMUST00000180097 Gpatch8A2A6A1 1505 aa13.32□□□□□ -0.28
Trav9n-2-201ENSMUST00000180097 CadpsQ80TJ1 1355 aa13.31□□□□□ -0.28
Trav9n-2-201ENSMUST00000180097 SynmQ70IV5 1561 aa13.3□□□□□ -0.28
Trav9n-2-201ENSMUST00000180097 Gm156Q58A37 223 aa13.29□□□□□ -0.28
Trav9n-2-201ENSMUST00000180097 Zeb1Q64318 1117 aa13.29□□□□□ -0.28
Trav9n-2-201ENSMUST00000180097 Pla2r1Q62028 1487 aa13.29□□□□□ -0.28
Trav9n-2-201ENSMUST00000180097 Adgrl3Q80TS3 1537 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms