RNA–Protein interactions for RNA: ENSMUST00000179226.7

Col4a3bp-203, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 3,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-203ENSMUST00000179226 NischQ80TM9 1593 aa29.19■■■□□ 2.26
Col4a3bp-203ENSMUST00000179226 Gm35339A0A140LHH9 1649 aa28.57■■■□□ 2.16
Col4a3bp-203ENSMUST00000179226 Abcc9P70170 1546 aa28.2■■■□□ 2.11
Col4a3bp-203ENSMUST00000179226 Rhox8Q6VSS7 320 aa27.92■■■□□ 2.06
Col4a3bp-203ENSMUST00000179226 Abcc8B2RUS7 1588 aa27.79■■■□□ 2.04
Col4a3bp-203ENSMUST00000179226 Rpgrip1Q9EPQ2 1331 aa27.7■■■□□ 2.02
Col4a3bp-203ENSMUST00000179226 Rtl1Q7M732 1744 aa27.66■■■□□ 2.02
Col4a3bp-203ENSMUST00000179226 Ccdc180J3QNE4 1664 aa27.46■■□□□ 1.99
Col4a3bp-203ENSMUST00000179226 Acin1Q9JIX8 1338 aaKnown RBP27.09■■□□□ 1.93
Col4a3bp-203ENSMUST00000179226 Ehmt2Q9Z148 1263 aaKnown RBP26.98■■□□□ 1.91
Col4a3bp-203ENSMUST00000179226 Pcgf6Q99NA9 353 aa26.65■■□□□ 1.86
Col4a3bp-203ENSMUST00000179226 Zcchc6Q5BLK4 1491 aaKnown RBP26.62■■□□□ 1.85
Col4a3bp-203ENSMUST00000179226 Dcaf1Q80TR8 1506 aa26.22■■□□□ 1.79
Col4a3bp-203ENSMUST00000179226 ScribQ80U72 1612 aa26.17■■□□□ 1.78
Col4a3bp-203ENSMUST00000179226 HrcG5E8J6 738 aa26.06■■□□□ 1.76
Col4a3bp-203ENSMUST00000179226 Supt5hO55201 1082 aaKnown RBP26.02■■□□□ 1.76
Col4a3bp-203ENSMUST00000179226 Ccdc136Q3TVA9 1136 aa25.83■■□□□ 1.73
Col4a3bp-203ENSMUST00000179226 Trim41Q5NCC3 630 aa25.8■■□□□ 1.72
Col4a3bp-203ENSMUST00000179226 Neurod1Q60867 357 aa25.74■■□□□ 1.71
Col4a3bp-203ENSMUST00000179226 Kdm5dQ62240 1548 aa25.62■■□□□ 1.69
Col4a3bp-203ENSMUST00000179226 Rb1cc1Q9ESK9 1588 aa25.54■■□□□ 1.68
Col4a3bp-203ENSMUST00000179226 Zeb1Q64318 1117 aa25.4■■□□□ 1.66
Col4a3bp-203ENSMUST00000179226 NacadQ5SWP3 1504 aa25.4■■□□□ 1.66
Col4a3bp-203ENSMUST00000179226 Las1lA2BE28 776 aaKnown RBP25.2■■□□□ 1.62
Col4a3bp-203ENSMUST00000179226 Cngb1E1AZ71 1325 aa25.16■■□□□ 1.62
Col4a3bp-203ENSMUST00000179226 Baz1aO88379 1555 aa25.15■■□□□ 1.62
Col4a3bp-203ENSMUST00000179226 Cep164Q5DU05 1446 aa25.08■■□□□ 1.61
Col4a3bp-203ENSMUST00000179226 Sall2Q9QX96 1004 aa25.06■■□□□ 1.6
Col4a3bp-203ENSMUST00000179226 1700123L14RikQ3V2K7 440 aa25.02■■□□□ 1.6
Col4a3bp-203ENSMUST00000179226 Csrnp3P59055 597 aa24.94■■□□□ 1.58
Col4a3bp-203ENSMUST00000179226 NefmP08553 848 aa24.89■■□□□ 1.58
Col4a3bp-203ENSMUST00000179226 Mier1Q5UAK0 511 aa24.89■■□□□ 1.57
Col4a3bp-203ENSMUST00000179226 Sycp2Q9CUU3 1500 aa24.88■■□□□ 1.57
Col4a3bp-203ENSMUST00000179226 Gab3Q8BSM5 595 aa24.87■■□□□ 1.57
Col4a3bp-203ENSMUST00000179226 Anks4bQ8K3X6 423 aa24.82■■□□□ 1.56
Col4a3bp-203ENSMUST00000179226 Chic1Q8CBW7 227 aa24.67■■□□□ 1.54
Col4a3bp-203ENSMUST00000179226 Wdr66E9Q743 1299 aa24.59■■□□□ 1.53
Col4a3bp-203ENSMUST00000179226 Rsf1E9PWW9 1441 aaKnown RBP24.59■■□□□ 1.53
Col4a3bp-203ENSMUST00000179226 Crybg2B7ZCC2 1516 aa24.59■■□□□ 1.53
Col4a3bp-203ENSMUST00000179226 CenpbP27790 599 aa24.53■■□□□ 1.52
Col4a3bp-203ENSMUST00000179226 Myt1Q8CFC2 1127 aa24.52■■□□□ 1.52
Col4a3bp-203ENSMUST00000179226 Smarca2Q6DIC0 1577 aa24.52■■□□□ 1.52
Col4a3bp-203ENSMUST00000179226 Aebp2Q9Z248 504 aaKnown RBP24.51■■□□□ 1.51
Col4a3bp-203ENSMUST00000179226 Ppargc1bQ8VHJ7 1014 aa24.47■■□□□ 1.51
Col4a3bp-203ENSMUST00000179226 Gm38655A0A286YDK6 273 aa24.45■■□□□ 1.5
Col4a3bp-203ENSMUST00000179226 BicraF8VPZ9 1578 aa24.43■■□□□ 1.5
Col4a3bp-203ENSMUST00000179226 Cdk11bP24788 784 aaKnown RBP24.42■■□□□ 1.5
Col4a3bp-203ENSMUST00000179226 Aplp2Q06335 707 aa24.38■■□□□ 1.49
Col4a3bp-203ENSMUST00000179226 Nop58Q6DFW4 536 aaKnown RBP24.38■■□□□ 1.49
Col4a3bp-203ENSMUST00000179226 Cecr2E9Q2Z1 1453 aa24.32■■□□□ 1.48
Col4a3bp-203ENSMUST00000179226 Ccdc88bQ4QRL3 1481 aa24.31■■□□□ 1.48
Col4a3bp-203ENSMUST00000179226 UbtfP25976 765 aaKnown RBP24.27■■□□□ 1.48
Col4a3bp-203ENSMUST00000179226 ClspnQ80YR7 1315 aa24.23■■□□□ 1.47
Col4a3bp-203ENSMUST00000179226 DiexfQ8BTT6 772 aaKnown RBP24.13■■□□□ 1.45
Col4a3bp-203ENSMUST00000179226 Brd4Q9ESU6 1400 aaKnown RBP24■■□□□ 1.43
Col4a3bp-203ENSMUST00000179226 Golga3P55937 1487 aa23.97■■□□□ 1.43
Col4a3bp-203ENSMUST00000179226 Esf1Q3V1V3 845 aaKnown RBP23.97■■□□□ 1.43
Col4a3bp-203ENSMUST00000179226 Synj1Q8CHC4 1574 aa23.91■■□□□ 1.42
Col4a3bp-203ENSMUST00000179226 TonslQ6NZL6 1363 aa23.89■■□□□ 1.42
Col4a3bp-203ENSMUST00000179226 Bcl11aQ9QYE3 773 aa23.84■■□□□ 1.41
Col4a3bp-203ENSMUST00000179226 Mapk8ip2Q9ERE9 830 aa23.8■■□□□ 1.4
Col4a3bp-203ENSMUST00000179226 CftrP26361 1476 aa23.79■■□□□ 1.4
Col4a3bp-203ENSMUST00000179226 Fam71e1A1L3C1 212 aa23.79■■□□□ 1.4
Col4a3bp-203ENSMUST00000179226 SafbD3YXK2 937 aaKnown RBP23.78■■□□□ 1.4
Col4a3bp-203ENSMUST00000179226 Hnrnpul2Q00PI9 745 aaKnown RBP23.73■■□□□ 1.39
Col4a3bp-203ENSMUST00000179226 Myt1lP97500 1187 aa23.7■■□□□ 1.39
Col4a3bp-203ENSMUST00000179226 Smarca4Q3TKT4 1613 aaKnown RBP23.7■■□□□ 1.38
Col4a3bp-203ENSMUST00000179226 Ap3b1Q9Z1T1 1105 aa23.6■■□□□ 1.37
Col4a3bp-203ENSMUST00000179226 Cttnbp2B9EJA2 1648 aa23.55■■□□□ 1.36
Col4a3bp-203ENSMUST00000179226 Plekhg3Q4VAC9 1341 aa23.54■■□□□ 1.36
Col4a3bp-203ENSMUST00000179226 Rapgef2Q8CHG7 1496 aa23.54■■□□□ 1.36
Col4a3bp-203ENSMUST00000179226 Top2bQ64511 1612 aa23.51■■□□□ 1.35
Col4a3bp-203ENSMUST00000179226 Iqgap2Q3UQ44 1575 aa23.48■■□□□ 1.35
Col4a3bp-203ENSMUST00000179226 Cc2d2aQ8CFW7 1633 aa23.48■■□□□ 1.35
Col4a3bp-203ENSMUST00000179226 Tnnt3Q9QZ47 272 aa23.45■■□□□ 1.34
Col4a3bp-203ENSMUST00000179226 Atad2bE9Q166 1460 aaKnown RBP23.45■■□□□ 1.34
Col4a3bp-203ENSMUST00000179226 Eid3Q3V124 375 aa23.43■■□□□ 1.34
Col4a3bp-203ENSMUST00000179226 Pds5bQ4VA53 1446 aaKnown RBP23.42■■□□□ 1.34
Col4a3bp-203ENSMUST00000179226 Cep162Q6ZQ06 1403 aa23.4■■□□□ 1.34
Col4a3bp-203ENSMUST00000179226 Ncapd3Q6ZQK0 1506 aa23.35■■□□□ 1.33
Col4a3bp-203ENSMUST00000179226 Clip1Q922J3 1391 aa23.32■■□□□ 1.32
Col4a3bp-203ENSMUST00000179226 Npm2Q80W85 207 aa23.3■■□□□ 1.32
Col4a3bp-203ENSMUST00000179226 Ifnlr1Q8CGK5 535 aa23.3■■□□□ 1.32
Col4a3bp-203ENSMUST00000179226 PrkcshO08795 521 aa23.25■■□□□ 1.31
Col4a3bp-203ENSMUST00000179226 Anp32aO35381 247 aa23.2■■□□□ 1.3
Col4a3bp-203ENSMUST00000179226 Top2aQ01320 1528 aaKnown RBP23.2■■□□□ 1.3
Col4a3bp-203ENSMUST00000179226 Znf710Q3U288 666 aa23.16■■□□□ 1.3
Col4a3bp-203ENSMUST00000179226 Frmpd1A2AKB4 1549 aa23.13■■□□□ 1.29
Col4a3bp-203ENSMUST00000179226 Fmn1Q05860 1466 aa23.11■■□□□ 1.29
Col4a3bp-203ENSMUST00000179226 Rpap1Q80TE0 1409 aa23.09■■□□□ 1.29
Col4a3bp-203ENSMUST00000179226 Nolc1E9Q5C9 702 aaKnown RBP23.08■■□□□ 1.29
Col4a3bp-203ENSMUST00000179226 Il27Q8K3I6 234 aa23.06■■□□□ 1.28
Col4a3bp-203ENSMUST00000179226 Ercc6F8VPZ5 1481 aa23.04■■□□□ 1.28
Col4a3bp-203ENSMUST00000179226 Wdr62Q3U3T8 1523 aa23.03■■□□□ 1.28
Col4a3bp-203ENSMUST00000179226 Kdm5bQ80Y84 1544 aa23.01■■□□□ 1.27
Col4a3bp-203ENSMUST00000179226 Calr4Q3TQS0 420 aa22.98■■□□□ 1.27
Col4a3bp-203ENSMUST00000179226 NclP09405 707 aaKnown RBP22.95■■□□□ 1.27
Col4a3bp-203ENSMUST00000179226 Stra8P70278 393 aa22.95■■□□□ 1.27
Col4a3bp-203ENSMUST00000179226 Eif4g1Q6NZJ6 1600 aaKnown RBP22.94■■□□□ 1.26
Col4a3bp-203ENSMUST00000179226 Kif15Q6P9L6 1387 aa22.9■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms