RNA–Protein interactions for RNA: ENSMUST00000178564.1

Snrnp48-202, Transcript of U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

TSL 5 BASIC

Gene Snrnp48, Length 847 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48-202ENSMUST00000178564 Gm35339A0A140LHH9 1649 aa39.89■■■■□ 3.98
Snrnp48-202ENSMUST00000178564 NischQ80TM9 1593 aa39.14■■■■□ 3.86
Snrnp48-202ENSMUST00000178564 Abcc9P70170 1546 aa37.94■■■■□ 3.66
Snrnp48-202ENSMUST00000178564 Abcc8B2RUS7 1588 aa37.89■■■■□ 3.66
Snrnp48-202ENSMUST00000178564 ScribQ80U72 1612 aa36.74■■■■□ 3.47
Snrnp48-202ENSMUST00000178564 Kdm5dQ62240 1548 aa35.42■■■■□ 3.26
Snrnp48-202ENSMUST00000178564 NacadQ5SWP3 1504 aa35.41■■■■□ 3.26
Snrnp48-202ENSMUST00000178564 Dcaf1Q80TR8 1506 aa34.87■■■■□ 3.17
Snrnp48-202ENSMUST00000178564 Sycp2Q9CUU3 1500 aa34.74■■■■□ 3.15
Snrnp48-202ENSMUST00000178564 BicraF8VPZ9 1578 aa34.34■■■■□ 3.09
Snrnp48-202ENSMUST00000178564 Rb1cc1Q9ESK9 1588 aa34.16■■■■□ 3.06
Snrnp48-202ENSMUST00000178564 Ccdc180J3QNE4 1664 aa33.71■■■□□ 2.99
Snrnp48-202ENSMUST00000178564 Baz1aO88379 1555 aa33.64■■■□□ 2.98
Snrnp48-202ENSMUST00000178564 Crybg2B7ZCC2 1516 aa33.44■■■□□ 2.94
Snrnp48-202ENSMUST00000178564 Rhox8Q6VSS7 320 aa33.43■■■□□ 2.94
Snrnp48-202ENSMUST00000178564 Dnajc5bQ9CQ94 199 aa33.37■■■□□ 2.93
Snrnp48-202ENSMUST00000178564 Pds5bQ4VA53 1446 aaKnown RBP33.27■■■□□ 2.92
Snrnp48-202ENSMUST00000178564 Thoc2B1AZI6 1594 aaKnown RBP33.22■■■□□ 2.91
Snrnp48-202ENSMUST00000178564 Zcchc6Q5BLK4 1491 aaKnown RBP33.07■■■□□ 2.88
Snrnp48-202ENSMUST00000178564 Atad2bE9Q166 1460 aaKnown RBP32.95■■■□□ 2.87
Snrnp48-202ENSMUST00000178564 Smarca4Q3TKT4 1613 aaKnown RBP32.73■■■□□ 2.83
Snrnp48-202ENSMUST00000178564 Smarca2Q6DIC0 1577 aa32.68■■■□□ 2.82
Snrnp48-202ENSMUST00000178564 Ercc6F8VPZ5 1481 aa32.62■■■□□ 2.81
Snrnp48-202ENSMUST00000178564 Cc2d2aQ8CFW7 1633 aa32.62■■■□□ 2.81
Snrnp48-202ENSMUST00000178564 Iqgap2Q3UQ44 1575 aa32.57■■■□□ 2.8
Snrnp48-202ENSMUST00000178564 Cecr2E9Q2Z1 1453 aa32.53■■■□□ 2.8
Snrnp48-202ENSMUST00000178564 Fam135aQ6NS59 1506 aa32.41■■■□□ 2.78
Snrnp48-202ENSMUST00000178564 Wdr62Q3U3T8 1523 aa32.32■■■□□ 2.76
Snrnp48-202ENSMUST00000178564 Frmpd1A2AKB4 1549 aa32.21■■■□□ 2.75
Snrnp48-202ENSMUST00000178564 Rtl1Q7M732 1744 aa32.17■■■□□ 2.74
Snrnp48-202ENSMUST00000178564 Unc13aQ4KUS2 1712 aa31.97■■■□□ 2.71
Snrnp48-202ENSMUST00000178564 Phldb1Q6PDH0 1371 aaKnown RBP31.96■■■□□ 2.71
Snrnp48-202ENSMUST00000178564 Baz1bQ9Z277 1479 aa31.96■■■□□ 2.71
Snrnp48-202ENSMUST00000178564 Cttnbp2B9EJA2 1648 aa31.86■■■□□ 2.69
Snrnp48-202ENSMUST00000178564 CftrP26361 1476 aa31.78■■■□□ 2.68
Snrnp48-202ENSMUST00000178564 Synj1Q8CHC4 1574 aa31.77■■■□□ 2.68
Snrnp48-202ENSMUST00000178564 Brd4Q9ESU6 1400 aaKnown RBP31.59■■■□□ 2.65
Snrnp48-202ENSMUST00000178564 Mrc2Q64449 1479 aa31.56■■■□□ 2.64
Snrnp48-202ENSMUST00000178564 Ubl4bQ9CQ84 188 aa31.55■■■□□ 2.64
Snrnp48-202ENSMUST00000178564 Ccdc136Q3TVA9 1136 aa31.31■■■□□ 2.6
Snrnp48-202ENSMUST00000178564 Lrriq1Q0P5X1 1673 aa31■■■□□ 2.55
Snrnp48-202ENSMUST00000178564 Rsf1E9PWW9 1441 aaKnown RBP30.98■■■□□ 2.55
Snrnp48-202ENSMUST00000178564 Esf1Q3V1V3 845 aaKnown RBP30.97■■■□□ 2.55
Snrnp48-202ENSMUST00000178564 Cux2P70298 1426 aa30.96■■■□□ 2.55
Snrnp48-202ENSMUST00000178564 Kif21aQ9QXL2 1672 aa30.93■■■□□ 2.54
Snrnp48-202ENSMUST00000178564 Lamc3Q9R0B6 1581 aa30.93■■■□□ 2.54
Snrnp48-202ENSMUST00000178564 Kif15Q6P9L6 1387 aa30.92■■■□□ 2.54
Snrnp48-202ENSMUST00000178564 Trim41Q5NCC3 630 aa30.79■■■□□ 2.52
Snrnp48-202ENSMUST00000178564 TnnQ80Z71 1560 aa30.62■■■□□ 2.49
Snrnp48-202ENSMUST00000178564 Top2bQ64511 1612 aa30.61■■■□□ 2.49
Snrnp48-202ENSMUST00000178564 Eif4g3Q80XI3 1579 aaKnown RBP30.56■■■□□ 2.48
Snrnp48-202ENSMUST00000178564 Cep164Q5DU05 1446 aa30.49■■■□□ 2.47
Snrnp48-202ENSMUST00000178564 Golga3P55937 1487 aa30.47■■■□□ 2.47
Snrnp48-202ENSMUST00000178564 Npm1Q61937 292 aaKnown RBP30.47■■■□□ 2.47
Snrnp48-202ENSMUST00000178564 Camsap1A2AHC3 1581 aa30.39■■■□□ 2.46
Snrnp48-202ENSMUST00000178564 Ccdc18Q640L5 1455 aa30.37■■■□□ 2.45
Snrnp48-202ENSMUST00000178564 Urb2E9Q7L1 1524 aaKnown RBP30.35■■■□□ 2.45
Snrnp48-202ENSMUST00000178564 Dhx29Q6PGC1 1365 aaKnown RBP30.29■■■□□ 2.44
Snrnp48-202ENSMUST00000178564 Crocc2F6XLV1 1638 aa30.29■■■□□ 2.44
Snrnp48-202ENSMUST00000178564 Dnajc5P60904 198 aa30.27■■■□□ 2.44
Snrnp48-202ENSMUST00000178564 Plb1Q3TTY0 1478 aa30.25■■■□□ 2.43
Snrnp48-202ENSMUST00000178564 LrpprcQ6PB66 1392 aaKnown RBP30.2■■■□□ 2.43
Snrnp48-202ENSMUST00000178564 Cngb1E1AZ71 1325 aa30.2■■■□□ 2.42
Snrnp48-202ENSMUST00000178564 Fmn1Q05860 1466 aa30.18■■■□□ 2.42
Snrnp48-202ENSMUST00000178564 Il27Q8K3I6 234 aa30.16■■■□□ 2.42
Snrnp48-202ENSMUST00000178564 Shroom2A2ALU4 1481 aa30.15■■■□□ 2.42
Snrnp48-202ENSMUST00000178564 PogzQ8BZH4 1409 aaKnown RBP30.07■■■□□ 2.4
Snrnp48-202ENSMUST00000178564 Rusc2Q80U22 1514 aa30.01■■■□□ 2.4
Snrnp48-202ENSMUST00000178564 Ift140E9PY46 1464 aa29.99■■■□□ 2.39
Snrnp48-202ENSMUST00000178564 Duox2A2AQ99 1517 aa29.92■■■□□ 2.38
Snrnp48-202ENSMUST00000178564 Grin2bQ01097 1482 aa29.89■■■□□ 2.38
Snrnp48-202ENSMUST00000178564 Samd9lQ69Z37 1561 aa29.83■■■□□ 2.37
Snrnp48-202ENSMUST00000178564 Setd1bQ8CFT2 1985 aa29.79■■■□□ 2.36
Snrnp48-202ENSMUST00000178564 Pbrm1Q8BSQ9 1634 aaKnown RBP29.78■■■□□ 2.36
Snrnp48-202ENSMUST00000178564 Disp1Q3TDN0 1521 aa29.75■■■□□ 2.35
Snrnp48-202ENSMUST00000178564 Col17a1Q07563 1470 aa29.72■■■□□ 2.35
Snrnp48-202ENSMUST00000178564 Nup160Q9Z0W3 1402 aaKnown RBP29.66■■■□□ 2.34
Snrnp48-202ENSMUST00000178564 Top2aQ01320 1528 aaKnown RBP29.64■■■□□ 2.34
Snrnp48-202ENSMUST00000178564 Ccdc88bQ4QRL3 1481 aa29.63■■■□□ 2.33
Snrnp48-202ENSMUST00000178564 Pabpn1Q8CCS6 302 aaKnown RBP29.62■■■□□ 2.33
Snrnp48-202ENSMUST00000178564 Efcab5A0JP43 1406 aa29.61■■■□□ 2.33
Snrnp48-202ENSMUST00000178564 Cc2d2bA0A286YDU8 1405 aa29.55■■■□□ 2.32
Snrnp48-202ENSMUST00000178564 NrkQ9R0G8 1455 aa29.5■■■□□ 2.31
Snrnp48-202ENSMUST00000178564 Magi3Q9EQJ9 1476 aa29.49■■■□□ 2.31
Snrnp48-202ENSMUST00000178564 Rad54l2Q99NG0 1466 aa29.48■■■□□ 2.31
Snrnp48-202ENSMUST00000178564 Zcchc11B2RX14 1644 aaKnown RBP29.48■■■□□ 2.31
Snrnp48-202ENSMUST00000178564 Grin2aP35436 1464 aa29.48■■■□□ 2.31
Snrnp48-202ENSMUST00000178564 Gpatch8A2A6A1 1505 aa29.45■■■□□ 2.31
Snrnp48-202ENSMUST00000178564 Pelp1Q9DBD5 1123 aaKnown RBP29.45■■■□□ 2.31
Snrnp48-202ENSMUST00000178564 AqrQ8CFQ3 1481 aaKnown RBP29.42■■■□□ 2.3
Snrnp48-202ENSMUST00000178564 Shroom4Q1W617 1475 aa29.39■■■□□ 2.3
Snrnp48-202ENSMUST00000178564 PtprkP35822 1457 aa29.35■■■□□ 2.29
Snrnp48-202ENSMUST00000178564 SynmQ70IV5 1561 aa29.33■■■□□ 2.29
Snrnp48-202ENSMUST00000178564 Pla2r1Q62028 1487 aa29.31■■■□□ 2.28
Snrnp48-202ENSMUST00000178564 Chic1Q8CBW7 227 aa29.27■■■□□ 2.28
Snrnp48-202ENSMUST00000178564 Fgd6Q69ZL1 1399 aa29.23■■■□□ 2.27
Snrnp48-202ENSMUST00000178564 Cep170Q6A065 1588 aa29.17■■■□□ 2.26
Snrnp48-202ENSMUST00000178564 Adgrl3Q80TS3 1537 aa29.11■■■□□ 2.25
Snrnp48-202ENSMUST00000178564 Gapvd1Q6PAR5 1458 aa29.1■■■□□ 2.25
Snrnp48-202ENSMUST00000178564 Abca16E9PWJ7 1678 aa29.09■■■□□ 2.25
Retrieved 100 of 22,080 RNA–protein pairs in 77 ms