RNA–Protein interactions for RNA: ENSMUST00000178477.8

Nkx2-1-202, Transcript of Homeobox protein Nkx-2.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx2-1, Length 2,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1-202ENSMUST00000178477 NischQ80TM9 1593 aa40.85■■■■■ 4.13
Nkx2-1-202ENSMUST00000178477 Gm35339A0A140LHH9 1649 aa40.83■■■■■ 4.13
Nkx2-1-202ENSMUST00000178477 Abcc9P70170 1546 aa39.55■■■■□ 3.92
Nkx2-1-202ENSMUST00000178477 Abcc8B2RUS7 1588 aa39.22■■■■□ 3.87
Nkx2-1-202ENSMUST00000178477 ScribQ80U72 1612 aa37.46■■■■□ 3.59
Nkx2-1-202ENSMUST00000178477 Rhox8Q6VSS7 320 aa36.38■■■■□ 3.41
Nkx2-1-202ENSMUST00000178477 Kdm5dQ62240 1548 aa36.36■■■■□ 3.41
Nkx2-1-202ENSMUST00000178477 NacadQ5SWP3 1504 aa36.15■■■■□ 3.38
Nkx2-1-202ENSMUST00000178477 Dcaf1Q80TR8 1506 aa36.06■■■■□ 3.36
Nkx2-1-202ENSMUST00000178477 Rb1cc1Q9ESK9 1588 aa35.7■■■■□ 3.3
Nkx2-1-202ENSMUST00000178477 Sycp2Q9CUU3 1500 aa35.47■■■■□ 3.27
Nkx2-1-202ENSMUST00000178477 Baz1aO88379 1555 aa35.16■■■■□ 3.22
Nkx2-1-202ENSMUST00000178477 BicraF8VPZ9 1578 aa35■■■■□ 3.19
Nkx2-1-202ENSMUST00000178477 Ccdc180J3QNE4 1664 aa34.98■■■■□ 3.19
Nkx2-1-202ENSMUST00000178477 Zcchc6Q5BLK4 1491 aaKnown RBP34.69■■■■□ 3.14
Nkx2-1-202ENSMUST00000178477 Crybg2B7ZCC2 1516 aa34.65■■■■□ 3.14
Nkx2-1-202ENSMUST00000178477 Rtl1Q7M732 1744 aa34.4■■■■□ 3.1
Nkx2-1-202ENSMUST00000178477 Smarca2Q6DIC0 1577 aa34.24■■■■□ 3.07
Nkx2-1-202ENSMUST00000178477 Ccdc136Q3TVA9 1136 aa34.03■■■■□ 3.04
Nkx2-1-202ENSMUST00000178477 Cecr2E9Q2Z1 1453 aa34.02■■■■□ 3.04
Nkx2-1-202ENSMUST00000178477 Smarca4Q3TKT4 1613 aaKnown RBP33.6■■■□□ 2.97
Nkx2-1-202ENSMUST00000178477 Pds5bQ4VA53 1446 aaKnown RBP33.57■■■□□ 2.96
Nkx2-1-202ENSMUST00000178477 Atad2bE9Q166 1460 aaKnown RBP33.48■■■□□ 2.95
Nkx2-1-202ENSMUST00000178477 Iqgap2Q3UQ44 1575 aa33.36■■■□□ 2.93
Nkx2-1-202ENSMUST00000178477 Synj1Q8CHC4 1574 aa33.34■■■□□ 2.93
Nkx2-1-202ENSMUST00000178477 Brd4Q9ESU6 1400 aaKnown RBP33.24■■■□□ 2.91
Nkx2-1-202ENSMUST00000178477 CftrP26361 1476 aa33.22■■■□□ 2.91
Nkx2-1-202ENSMUST00000178477 Trim41Q5NCC3 630 aa33.13■■■□□ 2.89
Nkx2-1-202ENSMUST00000178477 Dnajc5bQ9CQ94 199 aa33.13■■■□□ 2.89
Nkx2-1-202ENSMUST00000178477 Thoc2B1AZI6 1594 aaKnown RBP33.09■■■□□ 2.89
Nkx2-1-202ENSMUST00000178477 Cttnbp2B9EJA2 1648 aa33.08■■■□□ 2.89
Nkx2-1-202ENSMUST00000178477 Ercc6F8VPZ5 1481 aa32.94■■■□□ 2.86
Nkx2-1-202ENSMUST00000178477 Frmpd1A2AKB4 1549 aa32.93■■■□□ 2.86
Nkx2-1-202ENSMUST00000178477 Wdr62Q3U3T8 1523 aa32.9■■■□□ 2.86
Nkx2-1-202ENSMUST00000178477 Esf1Q3V1V3 845 aaKnown RBP32.83■■■□□ 2.85
Nkx2-1-202ENSMUST00000178477 Cc2d2aQ8CFW7 1633 aa32.73■■■□□ 2.83
Nkx2-1-202ENSMUST00000178477 Unc13aQ4KUS2 1712 aa32.64■■■□□ 2.82
Nkx2-1-202ENSMUST00000178477 Cngb1E1AZ71 1325 aa32.6■■■□□ 2.81
Nkx2-1-202ENSMUST00000178477 Golga3P55937 1487 aa32.47■■■□□ 2.79
Nkx2-1-202ENSMUST00000178477 Fam135aQ6NS59 1506 aa32.44■■■□□ 2.78
Nkx2-1-202ENSMUST00000178477 Phldb1Q6PDH0 1371 aaKnown RBP32.41■■■□□ 2.78
Nkx2-1-202ENSMUST00000178477 Top2bQ64511 1612 aa32.35■■■□□ 2.77
Nkx2-1-202ENSMUST00000178477 Ubl4bQ9CQ84 188 aa32.26■■■□□ 2.76
Nkx2-1-202ENSMUST00000178477 Rsf1E9PWW9 1441 aaKnown RBP32.12■■■□□ 2.73
Nkx2-1-202ENSMUST00000178477 Ccdc88bQ4QRL3 1481 aa32.07■■■□□ 2.72
Nkx2-1-202ENSMUST00000178477 Kif15Q6P9L6 1387 aa32.06■■■□□ 2.72
Nkx2-1-202ENSMUST00000178477 Chic1Q8CBW7 227 aa32.04■■■□□ 2.72
Nkx2-1-202ENSMUST00000178477 Lamc3Q9R0B6 1581 aa31.98■■■□□ 2.71
Nkx2-1-202ENSMUST00000178477 TnnQ80Z71 1560 aa31.88■■■□□ 2.69
Nkx2-1-202ENSMUST00000178477 Fmn1Q05860 1466 aa31.86■■■□□ 2.69
Nkx2-1-202ENSMUST00000178477 HrcG5E8J6 738 aa31.85■■■□□ 2.69
Nkx2-1-202ENSMUST00000178477 Cux2P70298 1426 aa31.84■■■□□ 2.69
Nkx2-1-202ENSMUST00000178477 Il27Q8K3I6 234 aa31.77■■■□□ 2.68
Nkx2-1-202ENSMUST00000178477 Mrc2Q64449 1479 aa31.75■■■□□ 2.67
Nkx2-1-202ENSMUST00000178477 Baz1bQ9Z277 1479 aa31.61■■■□□ 2.65
Nkx2-1-202ENSMUST00000178477 Camsap1A2AHC3 1581 aa31.58■■■□□ 2.65
Nkx2-1-202ENSMUST00000178477 Cep164Q5DU05 1446 aa31.54■■■□□ 2.64
Nkx2-1-202ENSMUST00000178477 Npm1Q61937 292 aaKnown RBP31.53■■■□□ 2.64
Nkx2-1-202ENSMUST00000178477 Top2aQ01320 1528 aaKnown RBP31.51■■■□□ 2.63
Nkx2-1-202ENSMUST00000178477 Gab3Q8BSM5 595 aa31.48■■■□□ 2.63
Nkx2-1-202ENSMUST00000178477 Ccdc18Q640L5 1455 aa31.47■■■□□ 2.63
Nkx2-1-202ENSMUST00000178477 Kif21aQ9QXL2 1672 aa31.47■■■□□ 2.63
Nkx2-1-202ENSMUST00000178477 Rpgrip1Q9EPQ2 1331 aa31.39■■■□□ 2.61
Nkx2-1-202ENSMUST00000178477 LrpprcQ6PB66 1392 aaKnown RBP31.26■■■□□ 2.59
Nkx2-1-202ENSMUST00000178477 Grin2bQ01097 1482 aa31.23■■■□□ 2.59
Nkx2-1-202ENSMUST00000178477 Dhx29Q6PGC1 1365 aaKnown RBP31.22■■■□□ 2.59
Nkx2-1-202ENSMUST00000178477 PtprkP35822 1457 aa31.18■■■□□ 2.58
Nkx2-1-202ENSMUST00000178477 Lrriq1Q0P5X1 1673 aa31.13■■■□□ 2.57
Nkx2-1-202ENSMUST00000178477 PogzQ8BZH4 1409 aaKnown RBP31.13■■■□□ 2.57
Nkx2-1-202ENSMUST00000178477 Duox2A2AQ99 1517 aa31.07■■■□□ 2.56
Nkx2-1-202ENSMUST00000178477 Crocc2F6XLV1 1638 aa31.04■■■□□ 2.56
Nkx2-1-202ENSMUST00000178477 Plb1Q3TTY0 1478 aa31■■■□□ 2.55
Nkx2-1-202ENSMUST00000178477 NrkQ9R0G8 1455 aa30.98■■■□□ 2.55
Nkx2-1-202ENSMUST00000178477 Rapgef2Q8CHG7 1496 aa30.97■■■□□ 2.55
Nkx2-1-202ENSMUST00000178477 Npm2Q80W85 207 aa30.97■■■□□ 2.55
Nkx2-1-202ENSMUST00000178477 Urb2E9Q7L1 1524 aaKnown RBP30.97■■■□□ 2.55
Nkx2-1-202ENSMUST00000178477 Shroom4Q1W617 1475 aa30.96■■■□□ 2.55
Nkx2-1-202ENSMUST00000178477 Samd9lQ69Z37 1561 aa30.92■■■□□ 2.54
Nkx2-1-202ENSMUST00000178477 Efcab5A0JP43 1406 aa30.86■■■□□ 2.53
Nkx2-1-202ENSMUST00000178477 Rad54l2Q99NG0 1466 aa30.78■■■□□ 2.52
Nkx2-1-202ENSMUST00000178477 Zeb1Q64318 1117 aa30.75■■■□□ 2.51
Nkx2-1-202ENSMUST00000178477 Cep162Q6ZQ06 1403 aa30.74■■■□□ 2.51
Nkx2-1-202ENSMUST00000178477 Myt1lP97500 1187 aa30.72■■■□□ 2.51
Nkx2-1-202ENSMUST00000178477 Arhgap35Q91YM2 1499 aa30.69■■■□□ 2.5
Nkx2-1-202ENSMUST00000178477 Eif4g1Q6NZJ6 1600 aaKnown RBP30.67■■■□□ 2.5
Nkx2-1-202ENSMUST00000178477 Setd1bQ8CFT2 1985 aa30.66■■■□□ 2.5
Nkx2-1-202ENSMUST00000178477 Disp1Q3TDN0 1521 aa30.64■■■□□ 2.5
Nkx2-1-202ENSMUST00000178477 Mroh2bQ7M6Y6 1581 aa30.61■■■□□ 2.49
Nkx2-1-202ENSMUST00000178477 Ift140E9PY46 1464 aa30.55■■■□□ 2.48
Nkx2-1-202ENSMUST00000178477 SynmQ70IV5 1561 aa30.55■■■□□ 2.48
Nkx2-1-202ENSMUST00000178477 Eif4g3Q80XI3 1579 aaKnown RBP30.55■■■□□ 2.48
Nkx2-1-202ENSMUST00000178477 Magi3Q9EQJ9 1476 aa30.53■■■□□ 2.48
Nkx2-1-202ENSMUST00000178477 Grin2aP35436 1464 aa30.48■■■□□ 2.47
Nkx2-1-202ENSMUST00000178477 Pla2r1Q62028 1487 aa30.46■■■□□ 2.47
Nkx2-1-202ENSMUST00000178477 Map3k1P53349 1493 aa30.39■■■□□ 2.46
Nkx2-1-202ENSMUST00000178477 Nup160Q9Z0W3 1402 aaKnown RBP30.39■■■□□ 2.46
Nkx2-1-202ENSMUST00000178477 Rusc2Q80U22 1514 aa30.35■■■□□ 2.45
Nkx2-1-202ENSMUST00000178477 Clip1Q922J3 1391 aa30.31■■■□□ 2.44
Nkx2-1-202ENSMUST00000178477 Pbrm1Q8BSQ9 1634 aaKnown RBP30.29■■■□□ 2.44
Nkx2-1-202ENSMUST00000178477 Carmil1Q6EDY6 1374 aa30.28■■■□□ 2.44
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms