RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 NischQ80TM9 1593 aa19.33■□□□□ 0.68
Rnf41-202ENSMUST00000171342 Gm35339A0A140LHH9 1649 aa18.75■□□□□ 0.59
Rnf41-202ENSMUST00000171342 Abcc9P70170 1546 aa18.63■□□□□ 0.57
Rnf41-202ENSMUST00000171342 Abcc8B2RUS7 1588 aa18.35■□□□□ 0.53
Rnf41-202ENSMUST00000171342 Rhox8Q6VSS7 320 aa18.23■□□□□ 0.51
Rnf41-202ENSMUST00000171342 ScribQ80U72 1612 aa17.17■□□□□ 0.34
Rnf41-202ENSMUST00000171342 Rtl1Q7M732 1744 aa16.93■□□□□ 0.3
Rnf41-202ENSMUST00000171342 Dcaf1Q80TR8 1506 aa16.93■□□□□ 0.3
Rnf41-202ENSMUST00000171342 Rb1cc1Q9ESK9 1588 aa16.91■□□□□ 0.3
Rnf41-202ENSMUST00000171342 Ccdc136Q3TVA9 1136 aa16.91■□□□□ 0.3
Rnf41-202ENSMUST00000171342 Kdm5dQ62240 1548 aa16.91■□□□□ 0.3
Rnf41-202ENSMUST00000171342 NacadQ5SWP3 1504 aa16.81■□□□□ 0.28
Rnf41-202ENSMUST00000171342 Ccdc180J3QNE4 1664 aa16.72■□□□□ 0.27
Rnf41-202ENSMUST00000171342 Zcchc6Q5BLK4 1491 aaKnown RBP16.66■□□□□ 0.26
Rnf41-202ENSMUST00000171342 Baz1aO88379 1555 aa16.65■□□□□ 0.26
Rnf41-202ENSMUST00000171342 Sycp2Q9CUU3 1500 aa16.43■□□□□ 0.22
Rnf41-202ENSMUST00000171342 Trim41Q5NCC3 630 aa16.4■□□□□ 0.22
Rnf41-202ENSMUST00000171342 Crybg2B7ZCC2 1516 aa16.28■□□□□ 0.2
Rnf41-202ENSMUST00000171342 Smarca2Q6DIC0 1577 aa16.2■□□□□ 0.18
Rnf41-202ENSMUST00000171342 Cngb1E1AZ71 1325 aa16.2■□□□□ 0.18
Rnf41-202ENSMUST00000171342 HrcG5E8J6 738 aa16.2■□□□□ 0.18
Rnf41-202ENSMUST00000171342 Esf1Q3V1V3 845 aaKnown RBP16.12■□□□□ 0.17
Rnf41-202ENSMUST00000171342 Cecr2E9Q2Z1 1453 aa16.08■□□□□ 0.16
Rnf41-202ENSMUST00000171342 BicraF8VPZ9 1578 aa16.04■□□□□ 0.16
Rnf41-202ENSMUST00000171342 Ehmt2Q9Z148 1263 aaKnown RBP16.02■□□□□ 0.15
Rnf41-202ENSMUST00000171342 Brd4Q9ESU6 1400 aaKnown RBP16.01■□□□□ 0.15
Rnf41-202ENSMUST00000171342 Gab3Q8BSM5 595 aa15.92■□□□□ 0.14
Rnf41-202ENSMUST00000171342 Chic1Q8CBW7 227 aa15.86■□□□□ 0.13
Rnf41-202ENSMUST00000171342 Synj1Q8CHC4 1574 aa15.81■□□□□ 0.12
Rnf41-202ENSMUST00000171342 CftrP26361 1476 aa15.77■□□□□ 0.12
Rnf41-202ENSMUST00000171342 Golga3P55937 1487 aa15.74■□□□□ 0.11
Rnf41-202ENSMUST00000171342 Cep164Q5DU05 1446 aa15.74■□□□□ 0.11
Rnf41-202ENSMUST00000171342 Rsf1E9PWW9 1441 aaKnown RBP15.71■□□□□ 0.11
Rnf41-202ENSMUST00000171342 Smarca4Q3TKT4 1613 aaKnown RBP15.68■□□□□ 0.1
Rnf41-202ENSMUST00000171342 Ccdc88bQ4QRL3 1481 aa15.65■□□□□ 0.1
Rnf41-202ENSMUST00000171342 Cttnbp2B9EJA2 1648 aa15.58■□□□□ 0.08
Rnf41-202ENSMUST00000171342 Pds5bQ4VA53 1446 aaKnown RBP15.55■□□□□ 0.08
Rnf41-202ENSMUST00000171342 Atad2bE9Q166 1460 aaKnown RBP15.54■□□□□ 0.08
Rnf41-202ENSMUST00000171342 Iqgap2Q3UQ44 1575 aa15.52■□□□□ 0.08
Rnf41-202ENSMUST00000171342 Il27Q8K3I6 234 aa15.46■□□□□ 0.06
Rnf41-202ENSMUST00000171342 Acin1Q9JIX8 1338 aaKnown RBP15.45■□□□□ 0.06
Rnf41-202ENSMUST00000171342 Rpgrip1Q9EPQ2 1331 aa15.45■□□□□ 0.06
Rnf41-202ENSMUST00000171342 Npm2Q80W85 207 aa15.44■□□□□ 0.06
Rnf41-202ENSMUST00000171342 Myt1lP97500 1187 aa15.44■□□□□ 0.06
Rnf41-202ENSMUST00000171342 Top2bQ64511 1612 aa15.36■□□□□ 0.05
Rnf41-202ENSMUST00000171342 Cc2d2aQ8CFW7 1633 aa15.34■□□□□ 0.05
Rnf41-202ENSMUST00000171342 Fmn1Q05860 1466 aa15.33■□□□□ 0.04
Rnf41-202ENSMUST00000171342 Ercc6F8VPZ5 1481 aa15.32■□□□□ 0.04
Rnf41-202ENSMUST00000171342 Frmpd1A2AKB4 1549 aa15.28■□□□□ 0.04
Rnf41-202ENSMUST00000171342 Kif15Q6P9L6 1387 aa15.26■□□□□ 0.03
Rnf41-202ENSMUST00000171342 Zeb1Q64318 1117 aa15.22■□□□□ 0.03
Rnf41-202ENSMUST00000171342 Ubl4bQ9CQ84 188 aa15.22■□□□□ 0.03
Rnf41-202ENSMUST00000171342 Wdr62Q3U3T8 1523 aa15.2■□□□□ 0.02
Rnf41-202ENSMUST00000171342 UbtfP25976 765 aaKnown RBP15.14■□□□□ 0.01
Rnf41-202ENSMUST00000171342 Top2aQ01320 1528 aaKnown RBP15.14■□□□□ 0.01
Rnf41-202ENSMUST00000171342 Npm1Q61937 292 aaKnown RBP15.12■□□□□ 0.01
Rnf41-202ENSMUST00000171342 Rapgef2Q8CHG7 1496 aa15.1■□□□□ 0.01
Rnf41-202ENSMUST00000171342 Cep162Q6ZQ06 1403 aa15.09■□□□□ 0.01
Rnf41-202ENSMUST00000171342 Phldb1Q6PDH0 1371 aaKnown RBP15.09■□□□□ 0.01
Rnf41-202ENSMUST00000171342 Ap3b1Q9Z1T1 1105 aa15.04■□□□□ -0
Rnf41-202ENSMUST00000171342 Mier1Q5UAK0 511 aa15.02□□□□□ -0.01
Rnf41-202ENSMUST00000171342 Cux2P70298 1426 aa15□□□□□ -0.01
Rnf41-202ENSMUST00000171342 Ccdc18Q640L5 1455 aa15□□□□□ -0.01
Rnf41-202ENSMUST00000171342 Plekhg3Q4VAC9 1341 aa14.99□□□□□ -0.01
Rnf41-202ENSMUST00000171342 Clip1Q922J3 1391 aa14.97□□□□□ -0.01
Rnf41-202ENSMUST00000171342 Lamc3Q9R0B6 1581 aa14.97□□□□□ -0.01
Rnf41-202ENSMUST00000171342 PtprkP35822 1457 aa14.96□□□□□ -0.02
Rnf41-202ENSMUST00000171342 TnnQ80Z71 1560 aa14.94□□□□□ -0.02
Rnf41-202ENSMUST00000171342 Dnajc5bQ9CQ94 199 aa14.92□□□□□ -0.02
Rnf41-202ENSMUST00000171342 Thoc2B1AZI6 1594 aaKnown RBP14.9□□□□□ -0.02
Rnf41-202ENSMUST00000171342 Camsap1A2AHC3 1581 aa14.88□□□□□ -0.03
Rnf41-202ENSMUST00000171342 Unc13aQ4KUS2 1712 aa14.87□□□□□ -0.03
Rnf41-202ENSMUST00000171342 Arhgap35Q91YM2 1499 aa14.84□□□□□ -0.03
Rnf41-202ENSMUST00000171342 Shroom4Q1W617 1475 aa14.83□□□□□ -0.04
Rnf41-202ENSMUST00000171342 NefmP08553 848 aa14.82□□□□□ -0.04
Rnf41-202ENSMUST00000171342 LrpprcQ6PB66 1392 aaKnown RBP14.82□□□□□ -0.04
Rnf41-202ENSMUST00000171342 Grin2bQ01097 1482 aa14.82□□□□□ -0.04
Rnf41-202ENSMUST00000171342 Setd5Q5XJV7 1441 aa14.81□□□□□ -0.04
Rnf41-202ENSMUST00000171342 NrkQ9R0G8 1455 aa14.8□□□□□ -0.04
Rnf41-202ENSMUST00000171342 Baz1bQ9Z277 1479 aa14.79□□□□□ -0.04
Rnf41-202ENSMUST00000171342 Eea1Q8BL66 1411 aa14.78□□□□□ -0.04
Rnf41-202ENSMUST00000171342 Fam135aQ6NS59 1506 aa14.75□□□□□ -0.05
Rnf41-202ENSMUST00000171342 Lmod2Q3UHZ5 550 aa14.75□□□□□ -0.05
Rnf41-202ENSMUST00000171342 Dhx29Q6PGC1 1365 aaKnown RBP14.74□□□□□ -0.05
Rnf41-202ENSMUST00000171342 Duox2A2AQ99 1517 aa14.7□□□□□ -0.06
Rnf41-202ENSMUST00000171342 PogzQ8BZH4 1409 aaKnown RBP14.7□□□□□ -0.06
Rnf41-202ENSMUST00000171342 Efcab5A0JP43 1406 aa14.7□□□□□ -0.06
Rnf41-202ENSMUST00000171342 Pcgf6Q99NA9 353 aa14.68□□□□□ -0.06
Rnf41-202ENSMUST00000171342 Mroh2bQ7M6Y6 1581 aa14.68□□□□□ -0.06
Rnf41-202ENSMUST00000171342 Eif4g1Q6NZJ6 1600 aaKnown RBP14.67□□□□□ -0.06
Rnf41-202ENSMUST00000171342 BlmO88700 1416 aa14.65□□□□□ -0.06
Rnf41-202ENSMUST00000171342 Supt5hO55201 1082 aaKnown RBP14.65□□□□□ -0.06
Rnf41-202ENSMUST00000171342 Arap1Q4LDD4 1452 aa14.64□□□□□ -0.07
Rnf41-202ENSMUST00000171342 Map3k1P53349 1493 aa14.63□□□□□ -0.07
Rnf41-202ENSMUST00000171342 Mrc2Q64449 1479 aa14.63□□□□□ -0.07
Rnf41-202ENSMUST00000171342 Rad54l2Q99NG0 1466 aa14.62□□□□□ -0.07
Rnf41-202ENSMUST00000171342 Carmil1Q6EDY6 1374 aa14.61□□□□□ -0.07
Rnf41-202ENSMUST00000171342 Las1lA2BE28 776 aaKnown RBP14.61□□□□□ -0.07
Rnf41-202ENSMUST00000171342 Fam50aQ9WV03 339 aaKnown RBP14.6□□□□□ -0.07
Rnf41-202ENSMUST00000171342 Wdr66E9Q743 1299 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 1917.9 ms