RNA–Protein interactions for RNA: ENSMUST00000166518.7

Ssr4-208, Transcript of Translocon-associated protein subunit delta, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssr4, Length 800 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr4-208ENSMUST00000166518 Gm35339A0A140LHH9 1649 aa30.14■■■□□ 2.42
Ssr4-208ENSMUST00000166518 NischQ80TM9 1593 aa29.69■■■□□ 2.34
Ssr4-208ENSMUST00000166518 Abcc8B2RUS7 1588 aa28.72■■■□□ 2.19
Ssr4-208ENSMUST00000166518 Abcc9P70170 1546 aa28.71■■■□□ 2.19
Ssr4-208ENSMUST00000166518 ScribQ80U72 1612 aa27.74■■■□□ 2.03
Ssr4-208ENSMUST00000166518 NacadQ5SWP3 1504 aa26.91■■□□□ 1.9
Ssr4-208ENSMUST00000166518 Kdm5dQ62240 1548 aa26.83■■□□□ 1.89
Ssr4-208ENSMUST00000166518 Dcaf1Q80TR8 1506 aa26.44■■□□□ 1.82
Ssr4-208ENSMUST00000166518 Sycp2Q9CUU3 1500 aa26.37■■□□□ 1.81
Ssr4-208ENSMUST00000166518 BicraF8VPZ9 1578 aa25.99■■□□□ 1.75
Ssr4-208ENSMUST00000166518 Rb1cc1Q9ESK9 1588 aa25.87■■□□□ 1.73
Ssr4-208ENSMUST00000166518 Ccdc180J3QNE4 1664 aa25.52■■□□□ 1.68
Ssr4-208ENSMUST00000166518 Rhox8Q6VSS7 320 aa25.51■■□□□ 1.67
Ssr4-208ENSMUST00000166518 Baz1aO88379 1555 aa25.5■■□□□ 1.67
Ssr4-208ENSMUST00000166518 Crybg2B7ZCC2 1516 aa25.45■■□□□ 1.66
Ssr4-208ENSMUST00000166518 Dnajc5bQ9CQ94 199 aa25.42■■□□□ 1.66
Ssr4-208ENSMUST00000166518 Pds5bQ4VA53 1446 aaKnown RBP25.37■■□□□ 1.65
Ssr4-208ENSMUST00000166518 Thoc2B1AZI6 1594 aaKnown RBP25.17■■□□□ 1.62
Ssr4-208ENSMUST00000166518 Zcchc6Q5BLK4 1491 aaKnown RBP25.14■■□□□ 1.61
Ssr4-208ENSMUST00000166518 Atad2bE9Q166 1460 aaKnown RBP25.09■■□□□ 1.61
Ssr4-208ENSMUST00000166518 Ercc6F8VPZ5 1481 aa24.83■■□□□ 1.57
Ssr4-208ENSMUST00000166518 Smarca4Q3TKT4 1613 aaKnown RBP24.82■■□□□ 1.56
Ssr4-208ENSMUST00000166518 Smarca2Q6DIC0 1577 aa24.78■■□□□ 1.56
Ssr4-208ENSMUST00000166518 Cc2d2aQ8CFW7 1633 aa24.75■■□□□ 1.55
Ssr4-208ENSMUST00000166518 Iqgap2Q3UQ44 1575 aa24.7■■□□□ 1.54
Ssr4-208ENSMUST00000166518 Cecr2E9Q2Z1 1453 aa24.65■■□□□ 1.54
Ssr4-208ENSMUST00000166518 Fam135aQ6NS59 1506 aa24.59■■□□□ 1.53
Ssr4-208ENSMUST00000166518 Wdr62Q3U3T8 1523 aa24.51■■□□□ 1.51
Ssr4-208ENSMUST00000166518 Frmpd1A2AKB4 1549 aa24.45■■□□□ 1.51
Ssr4-208ENSMUST00000166518 Baz1bQ9Z277 1479 aa24.4■■□□□ 1.5
Ssr4-208ENSMUST00000166518 Phldb1Q6PDH0 1371 aaKnown RBP24.39■■□□□ 1.49
Ssr4-208ENSMUST00000166518 Rtl1Q7M732 1744 aa24.26■■□□□ 1.47
Ssr4-208ENSMUST00000166518 Ubl4bQ9CQ84 188 aa24.14■■□□□ 1.45
Ssr4-208ENSMUST00000166518 Cttnbp2B9EJA2 1648 aa24.13■■□□□ 1.45
Ssr4-208ENSMUST00000166518 CftrP26361 1476 aa24.12■■□□□ 1.45
Ssr4-208ENSMUST00000166518 Unc13aQ4KUS2 1712 aa24.09■■□□□ 1.45
Ssr4-208ENSMUST00000166518 Brd4Q9ESU6 1400 aaKnown RBP24.07■■□□□ 1.44
Ssr4-208ENSMUST00000166518 Synj1Q8CHC4 1574 aa24.03■■□□□ 1.44
Ssr4-208ENSMUST00000166518 Mrc2Q64449 1479 aa24.01■■□□□ 1.43
Ssr4-208ENSMUST00000166518 Ccdc136Q3TVA9 1136 aa23.87■■□□□ 1.41
Ssr4-208ENSMUST00000166518 Esf1Q3V1V3 845 aaKnown RBP23.7■■□□□ 1.38
Ssr4-208ENSMUST00000166518 Rsf1E9PWW9 1441 aaKnown RBP23.62■■□□□ 1.37
Ssr4-208ENSMUST00000166518 Trim41Q5NCC3 630 aa23.58■■□□□ 1.37
Ssr4-208ENSMUST00000166518 Cux2P70298 1426 aa23.58■■□□□ 1.36
Ssr4-208ENSMUST00000166518 Kif15Q6P9L6 1387 aa23.56■■□□□ 1.36
Ssr4-208ENSMUST00000166518 Lrriq1Q0P5X1 1673 aa23.48■■□□□ 1.35
Ssr4-208ENSMUST00000166518 Lamc3Q9R0B6 1581 aa23.46■■□□□ 1.35
Ssr4-208ENSMUST00000166518 Kif21aQ9QXL2 1672 aa23.4■■□□□ 1.34
Ssr4-208ENSMUST00000166518 Npm1Q61937 292 aaKnown RBP23.34■■□□□ 1.33
Ssr4-208ENSMUST00000166518 Dnajc5P60904 198 aa23.29■■□□□ 1.32
Ssr4-208ENSMUST00000166518 Cep164Q5DU05 1446 aa23.26■■□□□ 1.31
Ssr4-208ENSMUST00000166518 Eif4g3Q80XI3 1579 aaKnown RBP23.17■■□□□ 1.3
Ssr4-208ENSMUST00000166518 Ccdc18Q640L5 1455 aa23.16■■□□□ 1.3
Ssr4-208ENSMUST00000166518 TnnQ80Z71 1560 aa23.15■■□□□ 1.3
Ssr4-208ENSMUST00000166518 Golga3P55937 1487 aa23.14■■□□□ 1.29
Ssr4-208ENSMUST00000166518 Top2bQ64511 1612 aa23.12■■□□□ 1.29
Ssr4-208ENSMUST00000166518 Dhx29Q6PGC1 1365 aaKnown RBP23.06■■□□□ 1.28
Ssr4-208ENSMUST00000166518 Urb2E9Q7L1 1524 aaKnown RBP23.03■■□□□ 1.28
Ssr4-208ENSMUST00000166518 Il27Q8K3I6 234 aa23.03■■□□□ 1.28
Ssr4-208ENSMUST00000166518 Cngb1E1AZ71 1325 aa23.03■■□□□ 1.28
Ssr4-208ENSMUST00000166518 Camsap1A2AHC3 1581 aa23.02■■□□□ 1.28
Ssr4-208ENSMUST00000166518 LrpprcQ6PB66 1392 aaKnown RBP23.01■■□□□ 1.27
Ssr4-208ENSMUST00000166518 Plb1Q3TTY0 1478 aa22.99■■□□□ 1.27
Ssr4-208ENSMUST00000166518 Crocc2F6XLV1 1638 aa22.97■■□□□ 1.27
Ssr4-208ENSMUST00000166518 Shroom2A2ALU4 1481 aa22.97■■□□□ 1.27
Ssr4-208ENSMUST00000166518 Fmn1Q05860 1466 aa22.92■■□□□ 1.26
Ssr4-208ENSMUST00000166518 PogzQ8BZH4 1409 aaKnown RBP22.87■■□□□ 1.25
Ssr4-208ENSMUST00000166518 Ift140E9PY46 1464 aa22.84■■□□□ 1.25
Ssr4-208ENSMUST00000166518 Rusc2Q80U22 1514 aa22.77■■□□□ 1.24
Ssr4-208ENSMUST00000166518 Duox2A2AQ99 1517 aa22.75■■□□□ 1.23
Ssr4-208ENSMUST00000166518 Grin2bQ01097 1482 aa22.7■■□□□ 1.22
Ssr4-208ENSMUST00000166518 Pabpn1Q8CCS6 302 aaKnown RBP22.69■■□□□ 1.22
Ssr4-208ENSMUST00000166518 Col17a1Q07563 1470 aa22.62■■□□□ 1.21
Ssr4-208ENSMUST00000166518 Disp1Q3TDN0 1521 aa22.61■■□□□ 1.21
Ssr4-208ENSMUST00000166518 Pbrm1Q8BSQ9 1634 aaKnown RBP22.58■■□□□ 1.21
Ssr4-208ENSMUST00000166518 Efcab5A0JP43 1406 aa22.57■■□□□ 1.2
Ssr4-208ENSMUST00000166518 Samd9lQ69Z37 1561 aa22.56■■□□□ 1.2
Ssr4-208ENSMUST00000166518 Cc2d2bA0A286YDU8 1405 aa22.54■■□□□ 1.2
Ssr4-208ENSMUST00000166518 Nup160Q9Z0W3 1402 aaKnown RBP22.54■■□□□ 1.2
Ssr4-208ENSMUST00000166518 Pelp1Q9DBD5 1123 aaKnown RBP22.53■■□□□ 1.2
Ssr4-208ENSMUST00000166518 Zcchc11B2RX14 1644 aaKnown RBP22.45■■□□□ 1.18
Ssr4-208ENSMUST00000166518 Top2aQ01320 1528 aaKnown RBP22.44■■□□□ 1.18
Ssr4-208ENSMUST00000166518 Setd1bQ8CFT2 1985 aa22.44■■□□□ 1.18
Ssr4-208ENSMUST00000166518 Ccdc88bQ4QRL3 1481 aa22.43■■□□□ 1.18
Ssr4-208ENSMUST00000166518 NrkQ9R0G8 1455 aa22.43■■□□□ 1.18
Ssr4-208ENSMUST00000166518 Grin2aP35436 1464 aa22.39■■□□□ 1.17
Ssr4-208ENSMUST00000166518 Rad54l2Q99NG0 1466 aa22.39■■□□□ 1.17
Ssr4-208ENSMUST00000166518 AqrQ8CFQ3 1481 aaKnown RBP22.36■■□□□ 1.17
Ssr4-208ENSMUST00000166518 Magi3Q9EQJ9 1476 aa22.35■■□□□ 1.17
Ssr4-208ENSMUST00000166518 Shroom4Q1W617 1475 aa22.3■■□□□ 1.16
Ssr4-208ENSMUST00000166518 Fgd6Q69ZL1 1399 aa22.3■■□□□ 1.16
Ssr4-208ENSMUST00000166518 Gpatch8A2A6A1 1505 aa22.26■■□□□ 1.15
Ssr4-208ENSMUST00000166518 SynmQ70IV5 1561 aa22.24■■□□□ 1.15
Ssr4-208ENSMUST00000166518 Chic1Q8CBW7 227 aa22.23■■□□□ 1.15
Ssr4-208ENSMUST00000166518 PtprkP35822 1457 aa22.22■■□□□ 1.15
Ssr4-208ENSMUST00000166518 Pla2r1Q62028 1487 aa22.21■■□□□ 1.15
Ssr4-208ENSMUST00000166518 Adgrl3Q80TS3 1537 aa22.16■■□□□ 1.14
Ssr4-208ENSMUST00000166518 Gapvd1Q6PAR5 1458 aa22.15■■□□□ 1.14
Ssr4-208ENSMUST00000166518 Cep170Q6A065 1588 aa22.14■■□□□ 1.13
Ssr4-208ENSMUST00000166518 Zeb1Q64318 1117 aa22.13■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms