RNA–Protein interactions for RNA: ENSMUST00000164661.3

Trim43a-201, Transcript of Tripartite motif-containing protein 43A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim43a, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43a-201ENSMUST00000164661 NischQ80TM9 1593 aa17.5■□□□□ 0.39
Trim43a-201ENSMUST00000164661 Gm35339A0A140LHH9 1649 aa17.14■□□□□ 0.33
Trim43a-201ENSMUST00000164661 Abcc9P70170 1546 aa17.04■□□□□ 0.32
Trim43a-201ENSMUST00000164661 Abcc8B2RUS7 1588 aa16.59■□□□□ 0.25
Trim43a-201ENSMUST00000164661 Rtl1Q7M732 1744 aa16.51■□□□□ 0.23
Trim43a-201ENSMUST00000164661 Rhox8Q6VSS7 320 aa16.31■□□□□ 0.2
Trim43a-201ENSMUST00000164661 Ccdc180J3QNE4 1664 aa16.23■□□□□ 0.19
Trim43a-201ENSMUST00000164661 Rpgrip1Q9EPQ2 1331 aa15.93■□□□□ 0.14
Trim43a-201ENSMUST00000164661 Zcchc6Q5BLK4 1491 aaKnown RBP15.76■□□□□ 0.11
Trim43a-201ENSMUST00000164661 Dcaf1Q80TR8 1506 aa15.69■□□□□ 0.1
Trim43a-201ENSMUST00000164661 HrcG5E8J6 738 aa15.55■□□□□ 0.08
Trim43a-201ENSMUST00000164661 Acin1Q9JIX8 1338 aaKnown RBP15.4■□□□□ 0.06
Trim43a-201ENSMUST00000164661 Rb1cc1Q9ESK9 1588 aa15.31■□□□□ 0.04
Trim43a-201ENSMUST00000164661 ScribQ80U72 1612 aa15.22■□□□□ 0.03
Trim43a-201ENSMUST00000164661 Baz1aO88379 1555 aa15.22■□□□□ 0.03
Trim43a-201ENSMUST00000164661 Ccdc136Q3TVA9 1136 aa15.07■□□□□ 0
Trim43a-201ENSMUST00000164661 Crybg2B7ZCC2 1516 aa15.06■□□□□ 0
Trim43a-201ENSMUST00000164661 Kdm5dQ62240 1548 aa15.05■□□□□ -0
Trim43a-201ENSMUST00000164661 NacadQ5SWP3 1504 aa15□□□□□ -0.01
Trim43a-201ENSMUST00000164661 Trim41Q5NCC3 630 aa14.98□□□□□ -0.01
Trim43a-201ENSMUST00000164661 Cep164Q5DU05 1446 aa14.91□□□□□ -0.02
Trim43a-201ENSMUST00000164661 Ube2uB1AUC4 352 aa14.91□□□□□ -0.02
Trim43a-201ENSMUST00000164661 Smarca2Q6DIC0 1577 aa14.88□□□□□ -0.03
Trim43a-201ENSMUST00000164661 Ehmt2Q9Z148 1263 aaKnown RBP14.83□□□□□ -0.04
Trim43a-201ENSMUST00000164661 Pcgf6Q99NA9 353 aa14.79□□□□□ -0.04
Trim43a-201ENSMUST00000164661 Sycp2Q9CUU3 1500 aa14.64□□□□□ -0.07
Trim43a-201ENSMUST00000164661 Brd4Q9ESU6 1400 aaKnown RBP14.61□□□□□ -0.07
Trim43a-201ENSMUST00000164661 Rsf1E9PWW9 1441 aaKnown RBP14.52□□□□□ -0.09
Trim43a-201ENSMUST00000164661 NefmP08553 848 aa14.49□□□□□ -0.09
Trim43a-201ENSMUST00000164661 Golga3P55937 1487 aa14.49□□□□□ -0.09
Trim43a-201ENSMUST00000164661 Chic1Q8CBW7 227 aa14.44□□□□□ -0.1
Trim43a-201ENSMUST00000164661 Supt5hO55201 1082 aaKnown RBP14.42□□□□□ -0.1
Trim43a-201ENSMUST00000164661 Cngb1E1AZ71 1325 aa14.41□□□□□ -0.1
Trim43a-201ENSMUST00000164661 Cecr2E9Q2Z1 1453 aa14.36□□□□□ -0.11
Trim43a-201ENSMUST00000164661 Ccdc88bQ4QRL3 1481 aa14.36□□□□□ -0.11
Trim43a-201ENSMUST00000164661 Synj1Q8CHC4 1574 aa14.31□□□□□ -0.12
Trim43a-201ENSMUST00000164661 Gab3Q8BSM5 595 aa14.29□□□□□ -0.12
Trim43a-201ENSMUST00000164661 CftrP26361 1476 aa14.28□□□□□ -0.12
Trim43a-201ENSMUST00000164661 Mier1Q5UAK0 511 aa14.26□□□□□ -0.13
Trim43a-201ENSMUST00000164661 Top2bQ64511 1612 aa14.24□□□□□ -0.13
Trim43a-201ENSMUST00000164661 BicraF8VPZ9 1578 aa14.19□□□□□ -0.14
Trim43a-201ENSMUST00000164661 Cttnbp2B9EJA2 1648 aa14.17□□□□□ -0.14
Trim43a-201ENSMUST00000164661 Esf1Q3V1V3 845 aaKnown RBP14.16□□□□□ -0.14
Trim43a-201ENSMUST00000164661 Las1lA2BE28 776 aaKnown RBP14.14□□□□□ -0.15
Trim43a-201ENSMUST00000164661 Neurod1Q60867 357 aa14.14□□□□□ -0.15
Trim43a-201ENSMUST00000164661 Zeb1Q64318 1117 aa14.14□□□□□ -0.15
Trim43a-201ENSMUST00000164661 Rapgef2Q8CHG7 1496 aa14.13□□□□□ -0.15
Trim43a-201ENSMUST00000164661 Fmn1Q05860 1466 aa14.08□□□□□ -0.15
Trim43a-201ENSMUST00000164661 Sall2Q9QX96 1004 aa14.04□□□□□ -0.16
Trim43a-201ENSMUST00000164661 Smarca4Q3TKT4 1613 aaKnown RBP14.04□□□□□ -0.16
Trim43a-201ENSMUST00000164661 Top2aQ01320 1528 aaKnown RBP14.02□□□□□ -0.17
Trim43a-201ENSMUST00000164661 Anks4bQ8K3X6 423 aa14□□□□□ -0.17
Trim43a-201ENSMUST00000164661 Cep162Q6ZQ06 1403 aa13.98□□□□□ -0.17
Trim43a-201ENSMUST00000164661 Cc2d2aQ8CFW7 1633 aa13.95□□□□□ -0.18
Trim43a-201ENSMUST00000164661 UbtfP25976 765 aaKnown RBP13.91□□□□□ -0.18
Trim43a-201ENSMUST00000164661 ClspnQ80YR7 1315 aa13.9□□□□□ -0.18
Trim43a-201ENSMUST00000164661 Eif4g1Q6NZJ6 1600 aaKnown RBP13.81□□□□□ -0.2
Trim43a-201ENSMUST00000164661 Wdr66E9Q743 1299 aa13.8□□□□□ -0.2
Trim43a-201ENSMUST00000164661 Cdk11bP24788 784 aaKnown RBP13.8□□□□□ -0.2
Trim43a-201ENSMUST00000164661 Clip1Q922J3 1391 aa13.8□□□□□ -0.2
Trim43a-201ENSMUST00000164661 TonslQ6NZL6 1363 aa13.79□□□□□ -0.2
Trim43a-201ENSMUST00000164661 Aebp2Q9Z248 504 aaKnown RBP13.79□□□□□ -0.2
Trim43a-201ENSMUST00000164661 Iqgap2Q3UQ44 1575 aa13.79□□□□□ -0.2
Trim43a-201ENSMUST00000164661 Nop58Q6DFW4 536 aaKnown RBP13.76□□□□□ -0.21
Trim43a-201ENSMUST00000164661 Npm2Q80W85 207 aa13.76□□□□□ -0.21
Trim43a-201ENSMUST00000164661 Dnajc5bQ9CQ94 199 aa13.76□□□□□ -0.21
Trim43a-201ENSMUST00000164661 Atad2bE9Q166 1460 aaKnown RBP13.76□□□□□ -0.21
Trim43a-201ENSMUST00000164661 Myt1lP97500 1187 aa13.75□□□□□ -0.21
Trim43a-201ENSMUST00000164661 Ncapd3Q6ZQK0 1506 aa13.75□□□□□ -0.21
Trim43a-201ENSMUST00000164661 TnnQ80Z71 1560 aa13.74□□□□□ -0.21
Trim43a-201ENSMUST00000164661 Aplp2Q06335 707 aa13.71□□□□□ -0.22
Trim43a-201ENSMUST00000164661 NrkQ9R0G8 1455 aa13.68□□□□□ -0.22
Trim43a-201ENSMUST00000164661 1700123L14RikQ3V2K7 440 aa13.68□□□□□ -0.22
Trim43a-201ENSMUST00000164661 Ccdc18Q640L5 1455 aa13.68□□□□□ -0.22
Trim43a-201ENSMUST00000164661 Eea1Q8BL66 1411 aa13.67□□□□□ -0.22
Trim43a-201ENSMUST00000164661 Arhgap35Q91YM2 1499 aa13.66□□□□□ -0.22
Trim43a-201ENSMUST00000164661 Pds5bQ4VA53 1446 aaKnown RBP13.66□□□□□ -0.22
Trim43a-201ENSMUST00000164661 Myt1Q8CFC2 1127 aa13.66□□□□□ -0.22
Trim43a-201ENSMUST00000164661 Csrnp3P59055 597 aa13.63□□□□□ -0.23
Trim43a-201ENSMUST00000164661 Map3k1P53349 1493 aa13.63□□□□□ -0.23
Trim43a-201ENSMUST00000164661 Plekhg3Q4VAC9 1341 aa13.6□□□□□ -0.23
Trim43a-201ENSMUST00000164661 Arhgef5E9Q7D5 1581 aa13.58□□□□□ -0.24
Trim43a-201ENSMUST00000164661 Lamc3Q9R0B6 1581 aa13.57□□□□□ -0.24
Trim43a-201ENSMUST00000164661 Arap1Q4LDD4 1452 aa13.57□□□□□ -0.24
Trim43a-201ENSMUST00000164661 Kdm5bQ80Y84 1544 aa13.56□□□□□ -0.24
Trim43a-201ENSMUST00000164661 Shroom4Q1W617 1475 aa13.55□□□□□ -0.24
Trim43a-201ENSMUST00000164661 CenpbP27790 599 aa13.54□□□□□ -0.24
Trim43a-201ENSMUST00000164661 TchhA0A0B4J1F9 1599 aa13.54□□□□□ -0.24
Trim43a-201ENSMUST00000164661 Setd5Q5XJV7 1441 aa13.53□□□□□ -0.24
Trim43a-201ENSMUST00000164661 PtprkP35822 1457 aa13.53□□□□□ -0.24
Trim43a-201ENSMUST00000164661 Wdr62Q3U3T8 1523 aa13.5□□□□□ -0.25
Trim43a-201ENSMUST00000164661 Frmpd1A2AKB4 1549 aa13.5□□□□□ -0.25
Trim43a-201ENSMUST00000164661 Tnnt3Q9QZ47 272 aa13.5□□□□□ -0.25
Trim43a-201ENSMUST00000164661 Tiam1Q60610 1591 aa13.47□□□□□ -0.25
Trim43a-201ENSMUST00000164661 Baz1bQ9Z277 1479 aa13.47□□□□□ -0.25
Trim43a-201ENSMUST00000164661 Camsap1A2AHC3 1581 aa13.46□□□□□ -0.26
Trim43a-201ENSMUST00000164661 AqrQ8CFQ3 1481 aaKnown RBP13.45□□□□□ -0.26
Trim43a-201ENSMUST00000164661 Kif15Q6P9L6 1387 aa13.44□□□□□ -0.26
Trim43a-201ENSMUST00000164661 Mroh2bQ7M6Y6 1581 aa13.44□□□□□ -0.26
Trim43a-201ENSMUST00000164661 Ccer2J3QPU5 274 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 116.8 ms