RNA–Protein interactions for RNA: ENSMUST00000163623.2

Nedd9-202, Transcript of Enhancer of filamentation 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Nedd9, Length 4,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9-202ENSMUST00000163623 Rpgrip1Q9EPQ2 1331 aa18.52■□□□□ 0.56
Nedd9-202ENSMUST00000163623 Las1lA2BE28 776 aaKnown RBP18.45■□□□□ 0.54
Nedd9-202ENSMUST00000163623 Cngb1E1AZ71 1325 aa18.22■□□□□ 0.51
Nedd9-202ENSMUST00000163623 Amer1Q7TS75 1132 aa17.8■□□□□ 0.44
Nedd9-202ENSMUST00000163623 Pelp1Q9DBD5 1123 aaKnown RBP17.76■□□□□ 0.43
Nedd9-202ENSMUST00000163623 Myt1Q8CFC2 1127 aa17.6■□□□□ 0.41
Nedd9-202ENSMUST00000163623 Rhox8Q6VSS7 320 aa17.43■□□□□ 0.38
Nedd9-202ENSMUST00000163623 CenpbP27790 599 aa17.42■□□□□ 0.38
Nedd9-202ENSMUST00000163623 DiexfQ8BTT6 772 aaKnown RBP17.22■□□□□ 0.35
Nedd9-202ENSMUST00000163623 4930567H17RikQ3V0K5 233 aa16.92■□□□□ 0.3
Nedd9-202ENSMUST00000163623 Ehmt2Q9Z148 1263 aaKnown RBP16.91■□□□□ 0.3
Nedd9-202ENSMUST00000163623 Wdr66E9Q743 1299 aa16.83■□□□□ 0.28
Nedd9-202ENSMUST00000163623 Zeb1Q64318 1117 aa16.68■□□□□ 0.26
Nedd9-202ENSMUST00000163623 Ttbk1Q6PCN3 1308 aa16.62■□□□□ 0.25
Nedd9-202ENSMUST00000163623 Acin1Q9JIX8 1338 aaKnown RBP16.51■□□□□ 0.23
Nedd9-202ENSMUST00000163623 Pcgf6Q99NA9 353 aa16.45■□□□□ 0.22
Nedd9-202ENSMUST00000163623 4933416C03RikQ3V063 378 aa16.43■□□□□ 0.22
Nedd9-202ENSMUST00000163623 Rtl5Q5DTT4 599 aa16.34■□□□□ 0.21
Nedd9-202ENSMUST00000163623 Cdk11bP24788 784 aaKnown RBP16.2■□□□□ 0.18
Nedd9-202ENSMUST00000163623 Stra8P70278 393 aa16.2■□□□□ 0.18
Nedd9-202ENSMUST00000163623 Tnnt3Q9QZ47 272 aa16.08■□□□□ 0.17
Nedd9-202ENSMUST00000163623 Ythdc1E9Q5K9 736 aaKnown RBP16.07■□□□□ 0.16
Nedd9-202ENSMUST00000163623 NefmP08553 848 aa16.06■□□□□ 0.16
Nedd9-202ENSMUST00000163623 Nop58Q6DFW4 536 aaKnown RBP15.91■□□□□ 0.14
Nedd9-202ENSMUST00000163623 Supt5hO55201 1082 aaKnown RBP15.79■□□□□ 0.12
Nedd9-202ENSMUST00000163623 Bcl11aQ9QYE3 773 aa15.79■□□□□ 0.12
Nedd9-202ENSMUST00000163623 HrcG5E8J6 738 aa15.73■□□□□ 0.11
Nedd9-202ENSMUST00000163623 DaxxO35613 739 aa15.7■□□□□ 0.1
Nedd9-202ENSMUST00000163623 Anp32aO35381 247 aa15.69■□□□□ 0.1
Nedd9-202ENSMUST00000163623 Aplp2Q06335 707 aa15.69■□□□□ 0.1
Nedd9-202ENSMUST00000163623 Slc24a1Q91WD8 1130 aa15.69■□□□□ 0.1
Nedd9-202ENSMUST00000163623 Neurod1Q60867 357 aa15.67■□□□□ 0.1
Nedd9-202ENSMUST00000163623 Ccdc9Q8VC31 543 aaKnown RBP15.62■□□□□ 0.09
Nedd9-202ENSMUST00000163623 Ube2uB1AUC4 352 aa15.57■□□□□ 0.08
Nedd9-202ENSMUST00000163623 Csrnp3P59055 597 aa15.52■□□□□ 0.08
Nedd9-202ENSMUST00000163623 Anks4bQ8K3X6 423 aa15.52■□□□□ 0.08
Nedd9-202ENSMUST00000163623 NeflP08551 543 aa15.46■□□□□ 0.07
Nedd9-202ENSMUST00000163623 Gm38655A0A286YDK6 273 aa15.38■□□□□ 0.05
Nedd9-202ENSMUST00000163623 Anp32bQ9EST5 272 aaKnown RBP15.37■□□□□ 0.05
Nedd9-202ENSMUST00000163623 1700123L14RikQ3V2K7 440 aa15.35■□□□□ 0.05
Nedd9-202ENSMUST00000163623 Eif5bQ05D44 1216 aaKnown RBP15.34■□□□□ 0.05
Nedd9-202ENSMUST00000163623 Gab3Q8BSM5 595 aa15.34■□□□□ 0.05
Nedd9-202ENSMUST00000163623 NrdcQ8BHG1 1161 aa15.33■□□□□ 0.04
Nedd9-202ENSMUST00000163623 Trim41Q5NCC3 630 aa15.26■□□□□ 0.03
Nedd9-202ENSMUST00000163623 Hsp90aa1P07901 733 aaKnown RBP15.25■□□□□ 0.03
Nedd9-202ENSMUST00000163623 UbtfP25976 765 aaKnown RBP15.21■□□□□ 0.03
Nedd9-202ENSMUST00000163623 CatipB9EKE5 520 aa15.21■□□□□ 0.02
Nedd9-202ENSMUST00000163623 Ppargc1bQ8VHJ7 1014 aa15.19■□□□□ 0.02
Nedd9-202ENSMUST00000163623 Myt1lP97500 1187 aa15.18■□□□□ 0.02
Nedd9-202ENSMUST00000163623 Lmod3E9QA62 571 aa15.18■□□□□ 0.02
Nedd9-202ENSMUST00000163623 Ccdc136Q3TVA9 1136 aa15.14■□□□□ 0.01
Nedd9-202ENSMUST00000163623 Pknox2Q8BG99 474 aa15.14■□□□□ 0.01
Nedd9-202ENSMUST00000163623 Irx3P81067 507 aa15.14■□□□□ 0.01
Nedd9-202ENSMUST00000163623 Fam71e1A1L3C1 212 aa15.08■□□□□ 0
Nedd9-202ENSMUST00000163623 ClspnQ80YR7 1315 aa15.07■□□□□ 0
Nedd9-202ENSMUST00000163623 Ccdc27Q3V036 639 aa15□□□□□ -0.01
Nedd9-202ENSMUST00000163623 Znf326O88291 580 aa14.98□□□□□ -0.01
Nedd9-202ENSMUST00000163623 Tnnt2P50752 301 aa14.98□□□□□ -0.01
Nedd9-202ENSMUST00000163623 NclP09405 707 aaKnown RBP14.95□□□□□ -0.02
Nedd9-202ENSMUST00000163623 TonslQ6NZL6 1363 aa14.95□□□□□ -0.02
Nedd9-202ENSMUST00000163623 Upf2A2AT37 1269 aaKnown RBP14.93□□□□□ -0.02
Nedd9-202ENSMUST00000163623 Sall2Q9QX96 1004 aa14.92□□□□□ -0.02
Nedd9-202ENSMUST00000163623 PrkcshO08795 521 aa14.91□□□□□ -0.02
Nedd9-202ENSMUST00000163623 Mapk8ip2Q9ERE9 830 aa14.91□□□□□ -0.02
Nedd9-202ENSMUST00000163623 Trim44Q9QXA7 346 aa14.91□□□□□ -0.02
Nedd9-202ENSMUST00000163623 Npm2Q80W85 207 aa14.9□□□□□ -0.02
Nedd9-202ENSMUST00000163623 Ppp4r2Q0VGB7 417 aa14.89□□□□□ -0.03
Nedd9-202ENSMUST00000163623 Calr4Q3TQS0 420 aa14.89□□□□□ -0.03
Nedd9-202ENSMUST00000163623 Wdr43Q6ZQL4 677 aaKnown RBP14.84□□□□□ -0.03
Nedd9-202ENSMUST00000163623 Taok2Q6ZQ29 1240 aa14.82□□□□□ -0.04
Nedd9-202ENSMUST00000163623 AU015836B2RUM3 263 aa14.81□□□□□ -0.04
Nedd9-202ENSMUST00000163623 BccipQ9CWI3 316 aa14.81□□□□□ -0.04
Nedd9-202ENSMUST00000163623 NischQ80TM9 1593 aa14.81□□□□□ -0.04
Nedd9-202ENSMUST00000163623 Esf1Q3V1V3 845 aaKnown RBP14.8□□□□□ -0.04
Nedd9-202ENSMUST00000163623 Q8BT18 775 aa14.8□□□□□ -0.04
Nedd9-202ENSMUST00000163623 Podxl2Q8CAE9 603 aa14.79□□□□□ -0.04
Nedd9-202ENSMUST00000163623 Znf316Q6PGE4 1016 aa14.77□□□□□ -0.05
Nedd9-202ENSMUST00000163623 Gtf3c3Q3TMP1 882 aa14.73□□□□□ -0.05
Nedd9-202ENSMUST00000163623 Ccdc180J3QNE4 1664 aa14.71□□□□□ -0.05
Nedd9-202ENSMUST00000163623 ArxO35085 564 aa14.71□□□□□ -0.05
Nedd9-202ENSMUST00000163623 Mier1Q5UAK0 511 aa14.71□□□□□ -0.06
Nedd9-202ENSMUST00000163623 Hdac5Q9Z2V6 1113 aa14.62□□□□□ -0.07
Nedd9-202ENSMUST00000163623 4933402E13RikQ9D4D2 429 aa14.62□□□□□ -0.07
Nedd9-202ENSMUST00000163623 CanxP35564 591 aaKnown RBP14.62□□□□□ -0.07
Nedd9-202ENSMUST00000163623 Polr3glQ8R0C0 218 aa14.61□□□□□ -0.07
Nedd9-202ENSMUST00000163623 Rangap1P46061 589 aaKnown RBP14.59□□□□□ -0.07
Nedd9-202ENSMUST00000163623 Htatsf1Q8BGC0 757 aa14.56□□□□□ -0.08
Nedd9-202ENSMUST00000163623 DekQ7TNV0 380 aaKnown RBP14.55□□□□□ -0.08
Nedd9-202ENSMUST00000163623 Gtf3c5Q8R2T8 520 aa14.54□□□□□ -0.08
Nedd9-202ENSMUST00000163623 Ap3b1Q9Z1T1 1105 aa14.53□□□□□ -0.08
Nedd9-202ENSMUST00000163623 Rtn4Q99P72 1162 aaKnown RBP14.48□□□□□ -0.09
Nedd9-202ENSMUST00000163623 Zbtb7cQ8VCZ7 619 aa14.47□□□□□ -0.09
Nedd9-202ENSMUST00000163623 Map7d2A2AG50 781 aa14.46□□□□□ -0.09
Nedd9-202ENSMUST00000163623 Dnttip2Q8R2M2 758 aaKnown RBP14.46□□□□□ -0.1
Nedd9-202ENSMUST00000163623 Adam1bQ8R534 806 aa14.46□□□□□ -0.1
Nedd9-202ENSMUST00000163623 Vsig10D3YX43 558 aa14.45□□□□□ -0.1
Nedd9-202ENSMUST00000163623 Fam50aQ9WV03 339 aaKnown RBP14.45□□□□□ -0.1
Nedd9-202ENSMUST00000163623 PtmaP26350 111 aa14.43□□□□□ -0.1
Nedd9-202ENSMUST00000163623 MsnP26041 577 aaKnown RBP14.43□□□□□ -0.1
Nedd9-202ENSMUST00000163623 Rrp12Q6P5B0 1295 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 72.7 ms