RNA–Protein interactions for RNA: ENSMUST00000161241.7

Usf1-208, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf1, Length 2,167 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-208ENSMUST00000161241 NischQ80TM9 1593 aa25.18■■□□□ 1.62
Usf1-208ENSMUST00000161241 Gm35339A0A140LHH9 1649 aa24.68■■□□□ 1.54
Usf1-208ENSMUST00000161241 Abcc9P70170 1546 aa24.52■■□□□ 1.52
Usf1-208ENSMUST00000161241 Rtl1Q7M732 1744 aa24.02■■□□□ 1.44
Usf1-208ENSMUST00000161241 Abcc8B2RUS7 1588 aa23.81■■□□□ 1.4
Usf1-208ENSMUST00000161241 Ccdc180J3QNE4 1664 aa23.59■■□□□ 1.37
Usf1-208ENSMUST00000161241 Rhox8Q6VSS7 320 aa23.57■■□□□ 1.36
Usf1-208ENSMUST00000161241 Rpgrip1Q9EPQ2 1331 aa23.11■■□□□ 1.29
Usf1-208ENSMUST00000161241 Zcchc6Q5BLK4 1491 aaKnown RBP22.86■■□□□ 1.25
Usf1-208ENSMUST00000161241 Chic1Q8CBW7 227 aa22.49■■□□□ 1.19
Usf1-208ENSMUST00000161241 Acin1Q9JIX8 1338 aaKnown RBP22.45■■□□□ 1.18
Usf1-208ENSMUST00000161241 Dcaf1Q80TR8 1506 aa22.41■■□□□ 1.18
Usf1-208ENSMUST00000161241 HrcG5E8J6 738 aa22.34■■□□□ 1.17
Usf1-208ENSMUST00000161241 Rb1cc1Q9ESK9 1588 aa22.1■■□□□ 1.13
Usf1-208ENSMUST00000161241 ScribQ80U72 1612 aa22.1■■□□□ 1.13
Usf1-208ENSMUST00000161241 Baz1aO88379 1555 aa21.89■■□□□ 1.09
Usf1-208ENSMUST00000161241 Ehmt2Q9Z148 1263 aaKnown RBP21.81■■□□□ 1.08
Usf1-208ENSMUST00000161241 Ccdc136Q3TVA9 1136 aa21.78■■□□□ 1.08
Usf1-208ENSMUST00000161241 Pcgf6Q99NA9 353 aa21.68■■□□□ 1.06
Usf1-208ENSMUST00000161241 Kdm5dQ62240 1548 aa21.64■■□□□ 1.05
Usf1-208ENSMUST00000161241 Trim41Q5NCC3 630 aa21.61■■□□□ 1.05
Usf1-208ENSMUST00000161241 Cep164Q5DU05 1446 aa21.54■■□□□ 1.04
Usf1-208ENSMUST00000161241 Crybg2B7ZCC2 1516 aa21.48■■□□□ 1.03
Usf1-208ENSMUST00000161241 NacadQ5SWP3 1504 aa21.45■■□□□ 1.02
Usf1-208ENSMUST00000161241 Smarca2Q6DIC0 1577 aa21.44■■□□□ 1.02
Usf1-208ENSMUST00000161241 Supt5hO55201 1082 aaKnown RBP21.16■□□□□ 0.98
Usf1-208ENSMUST00000161241 Mapk8ip2Q9ERE9 830 aa21.02■□□□□ 0.96
Usf1-208ENSMUST00000161241 Rsf1E9PWW9 1441 aaKnown RBP21.01■□□□□ 0.95
Usf1-208ENSMUST00000161241 Sycp2Q9CUU3 1500 aa20.96■□□□□ 0.95
Usf1-208ENSMUST00000161241 NefmP08553 848 aa20.95■□□□□ 0.94
Usf1-208ENSMUST00000161241 Brd4Q9ESU6 1400 aaKnown RBP20.94■□□□□ 0.94
Usf1-208ENSMUST00000161241 Golga3P55937 1487 aa20.84■□□□□ 0.93
Usf1-208ENSMUST00000161241 Cngb1E1AZ71 1325 aa20.83■□□□□ 0.93
Usf1-208ENSMUST00000161241 Neurod1Q60867 357 aa20.8■□□□□ 0.92
Usf1-208ENSMUST00000161241 Ccdc88bQ4QRL3 1481 aa20.79■□□□□ 0.92
Usf1-208ENSMUST00000161241 Gab3Q8BSM5 595 aa20.75■□□□□ 0.91
Usf1-208ENSMUST00000161241 Mier1Q5UAK0 511 aa20.73■□□□□ 0.91
Usf1-208ENSMUST00000161241 Zeb1Q64318 1117 aa20.7■□□□□ 0.9
Usf1-208ENSMUST00000161241 BicraF8VPZ9 1578 aa20.69■□□□□ 0.9
Usf1-208ENSMUST00000161241 Cecr2E9Q2Z1 1453 aa20.68■□□□□ 0.9
Usf1-208ENSMUST00000161241 Synj1Q8CHC4 1574 aa20.68■□□□□ 0.9
Usf1-208ENSMUST00000161241 Las1lA2BE28 776 aaKnown RBP20.63■□□□□ 0.89
Usf1-208ENSMUST00000161241 Phf23Q8BSN5 401 aa20.61■□□□□ 0.89
Usf1-208ENSMUST00000161241 Top2bQ64511 1612 aa20.6■□□□□ 0.89
Usf1-208ENSMUST00000161241 Sall2Q9QX96 1004 aa20.55■□□□□ 0.88
Usf1-208ENSMUST00000161241 CftrP26361 1476 aa20.5■□□□□ 0.87
Usf1-208ENSMUST00000161241 Plppr3Q7TPB0 716 aa20.49■□□□□ 0.87
Usf1-208ENSMUST00000161241 Cttnbp2B9EJA2 1648 aa20.44■□□□□ 0.86
Usf1-208ENSMUST00000161241 Anks4bQ8K3X6 423 aa20.42■□□□□ 0.86
Usf1-208ENSMUST00000161241 Rapgef2Q8CHG7 1496 aa20.38■□□□□ 0.85
Usf1-208ENSMUST00000161241 Esf1Q3V1V3 845 aaKnown RBP20.34■□□□□ 0.85
Usf1-208ENSMUST00000161241 Cc2d2aQ8CFW7 1633 aa20.32■□□□□ 0.84
Usf1-208ENSMUST00000161241 Fmn1Q05860 1466 aa20.23■□□□□ 0.83
Usf1-208ENSMUST00000161241 Top2aQ01320 1528 aaKnown RBP20.23■□□□□ 0.83
Usf1-208ENSMUST00000161241 UbtfP25976 765 aaKnown RBP20.21■□□□□ 0.83
Usf1-208ENSMUST00000161241 ClspnQ80YR7 1315 aa20.21■□□□□ 0.83
Usf1-208ENSMUST00000161241 Dnajc5bQ9CQ94 199 aa20.2■□□□□ 0.82
Usf1-208ENSMUST00000161241 Smarca4Q3TKT4 1613 aaKnown RBP20.17■□□□□ 0.82
Usf1-208ENSMUST00000161241 Aebp2Q9Z248 504 aaKnown RBP20.16■□□□□ 0.82
Usf1-208ENSMUST00000161241 Cep162Q6ZQ06 1403 aa20.16■□□□□ 0.82
Usf1-208ENSMUST00000161241 Wdr66E9Q743 1299 aa20.15■□□□□ 0.82
Usf1-208ENSMUST00000161241 1700123L14RikQ3V2K7 440 aa20.15■□□□□ 0.82
Usf1-208ENSMUST00000161241 Cdk11bP24788 784 aaKnown RBP20.11■□□□□ 0.81
Usf1-208ENSMUST00000161241 Pds5bQ4VA53 1446 aaKnown RBP20.09■□□□□ 0.81
Usf1-208ENSMUST00000161241 Csrnp3P59055 597 aa20.08■□□□□ 0.81
Usf1-208ENSMUST00000161241 Nop58Q6DFW4 536 aaKnown RBP20.07■□□□□ 0.8
Usf1-208ENSMUST00000161241 Eif4g1Q6NZJ6 1600 aaKnown RBP20.02■□□□□ 0.79
Usf1-208ENSMUST00000161241 TonslQ6NZL6 1363 aa20.01■□□□□ 0.79
Usf1-208ENSMUST00000161241 Aplp2Q06335 707 aa20.01■□□□□ 0.79
Usf1-208ENSMUST00000161241 Ncapd3Q6ZQK0 1506 aa19.94■□□□□ 0.78
Usf1-208ENSMUST00000161241 Thoc2B1AZI6 1594 aaKnown RBP19.94■□□□□ 0.78
Usf1-208ENSMUST00000161241 Myt1lP97500 1187 aa19.91■□□□□ 0.78
Usf1-208ENSMUST00000161241 Clip1Q922J3 1391 aa19.91■□□□□ 0.78
Usf1-208ENSMUST00000161241 Myt1Q8CFC2 1127 aa19.9■□□□□ 0.78
Usf1-208ENSMUST00000161241 Atad2bE9Q166 1460 aaKnown RBP19.9■□□□□ 0.78
Usf1-208ENSMUST00000161241 Iqgap2Q3UQ44 1575 aa19.82■□□□□ 0.76
Usf1-208ENSMUST00000161241 Npm2Q80W85 207 aa19.82■□□□□ 0.76
Usf1-208ENSMUST00000161241 CenpbP27790 599 aa19.81■□□□□ 0.76
Usf1-208ENSMUST00000161241 TnnQ80Z71 1560 aa19.8■□□□□ 0.76
Usf1-208ENSMUST00000161241 Plekhg3Q4VAC9 1341 aa19.74■□□□□ 0.75
Usf1-208ENSMUST00000161241 Ercc6F8VPZ5 1481 aa19.71■□□□□ 0.75
Usf1-208ENSMUST00000161241 Arhgap35Q91YM2 1499 aa19.7■□□□□ 0.74
Usf1-208ENSMUST00000161241 Ppargc1bQ8VHJ7 1014 aa19.7■□□□□ 0.74
Usf1-208ENSMUST00000161241 Kdm5bQ80Y84 1544 aa19.69■□□□□ 0.74
Usf1-208ENSMUST00000161241 NrkQ9R0G8 1455 aa19.67■□□□□ 0.74
Usf1-208ENSMUST00000161241 Ccdc18Q640L5 1455 aa19.66■□□□□ 0.74
Usf1-208ENSMUST00000161241 Eea1Q8BL66 1411 aa19.65■□□□□ 0.74
Usf1-208ENSMUST00000161241 Kcna4Q61423 654 aa19.63■□□□□ 0.73
Usf1-208ENSMUST00000161241 Arap1Q4LDD4 1452 aa19.63■□□□□ 0.73
Usf1-208ENSMUST00000161241 Arhgef5E9Q7D5 1581 aa19.62■□□□□ 0.73
Usf1-208ENSMUST00000161241 TchhA0A0B4J1F9 1599 aa19.6■□□□□ 0.73
Usf1-208ENSMUST00000161241 Tnnt3Q9QZ47 272 aa19.56■□□□□ 0.72
Usf1-208ENSMUST00000161241 Map3k1P53349 1493 aa19.56■□□□□ 0.72
Usf1-208ENSMUST00000161241 PtprkP35822 1457 aa19.53■□□□□ 0.72
Usf1-208ENSMUST00000161241 Tiam1Q60610 1591 aa19.5■□□□□ 0.71
Usf1-208ENSMUST00000161241 Lamc3Q9R0B6 1581 aa19.49■□□□□ 0.71
Usf1-208ENSMUST00000161241 Shroom4Q1W617 1475 aa19.49■□□□□ 0.71
Usf1-208ENSMUST00000161241 Setd5Q5XJV7 1441 aa19.49■□□□□ 0.71
Usf1-208ENSMUST00000161241 Baz1bQ9Z277 1479 aa19.48■□□□□ 0.71
Usf1-208ENSMUST00000161241 Wdr62Q3U3T8 1523 aa19.48■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms