RNA–Protein interactions for RNA: ENSMUST00000149714.7

Lin54-208, Transcript of Protein lin-54 homolog, mousemouse

TSL 5 BASIC

Gene Lin54, Length 3,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54-208ENSMUST00000149714 NischQ80TM9 1593 aa26.32■■□□□ 1.8
Lin54-208ENSMUST00000149714 Gm35339A0A140LHH9 1649 aa25.41■■□□□ 1.66
Lin54-208ENSMUST00000149714 Abcc9P70170 1546 aa25.34■■□□□ 1.65
Lin54-208ENSMUST00000149714 Rhox8Q6VSS7 320 aa25.02■■□□□ 1.6
Lin54-208ENSMUST00000149714 Abcc8B2RUS7 1588 aa24.96■■□□□ 1.59
Lin54-208ENSMUST00000149714 ScribQ80U72 1612 aa23.46■■□□□ 1.35
Lin54-208ENSMUST00000149714 Ccdc136Q3TVA9 1136 aa23.27■■□□□ 1.32
Lin54-208ENSMUST00000149714 Kdm5dQ62240 1548 aa23.06■■□□□ 1.28
Lin54-208ENSMUST00000149714 Rb1cc1Q9ESK9 1588 aa23.06■■□□□ 1.28
Lin54-208ENSMUST00000149714 Rtl1Q7M732 1744 aa22.9■■□□□ 1.26
Lin54-208ENSMUST00000149714 Rpgrip1Q9EPQ2 1331 aa22.86■■□□□ 1.25
Lin54-208ENSMUST00000149714 Dcaf1Q80TR8 1506 aa22.81■■□□□ 1.24
Lin54-208ENSMUST00000149714 NacadQ5SWP3 1504 aa22.79■■□□□ 1.24
Lin54-208ENSMUST00000149714 Zcchc6Q5BLK4 1491 aaKnown RBP22.78■■□□□ 1.24
Lin54-208ENSMUST00000149714 Ccdc180J3QNE4 1664 aa22.69■■□□□ 1.22
Lin54-208ENSMUST00000149714 Ehmt2Q9Z148 1263 aaKnown RBP22.68■■□□□ 1.22
Lin54-208ENSMUST00000149714 Baz1aO88379 1555 aa22.63■■□□□ 1.21
Lin54-208ENSMUST00000149714 Acin1Q9JIX8 1338 aaKnown RBP22.38■■□□□ 1.17
Lin54-208ENSMUST00000149714 Sycp2Q9CUU3 1500 aa22.31■■□□□ 1.16
Lin54-208ENSMUST00000149714 Trim41Q5NCC3 630 aa22.26■■□□□ 1.15
Lin54-208ENSMUST00000149714 Cngb1E1AZ71 1325 aa22.24■■□□□ 1.15
Lin54-208ENSMUST00000149714 Smarca2Q6DIC0 1577 aa22.04■■□□□ 1.12
Lin54-208ENSMUST00000149714 Esf1Q3V1V3 845 aaKnown RBP22.04■■□□□ 1.12
Lin54-208ENSMUST00000149714 Cecr2E9Q2Z1 1453 aa22.02■■□□□ 1.12
Lin54-208ENSMUST00000149714 Gab3Q8BSM5 595 aa21.96■■□□□ 1.11
Lin54-208ENSMUST00000149714 HrcG5E8J6 738 aa21.94■■□□□ 1.1
Lin54-208ENSMUST00000149714 Pcgf6Q99NA9 353 aa21.93■■□□□ 1.1
Lin54-208ENSMUST00000149714 Crybg2B7ZCC2 1516 aa21.92■■□□□ 1.1
Lin54-208ENSMUST00000149714 BicraF8VPZ9 1578 aa21.91■■□□□ 1.1
Lin54-208ENSMUST00000149714 Chic1Q8CBW7 227 aa21.81■■□□□ 1.08
Lin54-208ENSMUST00000149714 Brd4Q9ESU6 1400 aaKnown RBP21.71■■□□□ 1.07
Lin54-208ENSMUST00000149714 Synj1Q8CHC4 1574 aa21.61■■□□□ 1.05
Lin54-208ENSMUST00000149714 Rsf1E9PWW9 1441 aaKnown RBP21.54■■□□□ 1.04
Lin54-208ENSMUST00000149714 Supt5hO55201 1082 aaKnown RBP21.5■■□□□ 1.03
Lin54-208ENSMUST00000149714 Ccdc88bQ4QRL3 1481 aa21.48■■□□□ 1.03
Lin54-208ENSMUST00000149714 CftrP26361 1476 aa21.47■■□□□ 1.03
Lin54-208ENSMUST00000149714 Cep164Q5DU05 1446 aa21.42■■□□□ 1.02
Lin54-208ENSMUST00000149714 Golga3P55937 1487 aa21.41■■□□□ 1.02
Lin54-208ENSMUST00000149714 Zeb1Q64318 1117 aa21.3■■□□□ 1
Lin54-208ENSMUST00000149714 Smarca4Q3TKT4 1613 aaKnown RBP21.3■■□□□ 1
Lin54-208ENSMUST00000149714 Il27Q8K3I6 234 aa21.26■□□□□ 0.99
Lin54-208ENSMUST00000149714 Myt1lP97500 1187 aa21.24■□□□□ 0.99
Lin54-208ENSMUST00000149714 Cttnbp2B9EJA2 1648 aa21.16■□□□□ 0.98
Lin54-208ENSMUST00000149714 Iqgap2Q3UQ44 1575 aa21.13■□□□□ 0.97
Lin54-208ENSMUST00000149714 Neurod1Q60867 357 aa21.12■□□□□ 0.97
Lin54-208ENSMUST00000149714 Npm2Q80W85 207 aa21.12■□□□□ 0.97
Lin54-208ENSMUST00000149714 Atad2bE9Q166 1460 aaKnown RBP21.06■□□□□ 0.96
Lin54-208ENSMUST00000149714 Cc2d2aQ8CFW7 1633 aa21.04■□□□□ 0.96
Lin54-208ENSMUST00000149714 Pds5bQ4VA53 1446 aaKnown RBP21.03■□□□□ 0.96
Lin54-208ENSMUST00000149714 Top2bQ64511 1612 aa20.92■□□□□ 0.94
Lin54-208ENSMUST00000149714 NefmP08553 848 aa20.84■□□□□ 0.93
Lin54-208ENSMUST00000149714 UbtfP25976 765 aaKnown RBP20.84■□□□□ 0.93
Lin54-208ENSMUST00000149714 Mier1Q5UAK0 511 aa20.84■□□□□ 0.93
Lin54-208ENSMUST00000149714 Frmpd1A2AKB4 1549 aa20.82■□□□□ 0.92
Lin54-208ENSMUST00000149714 Kif15Q6P9L6 1387 aa20.81■□□□□ 0.92
Lin54-208ENSMUST00000149714 Fmn1Q05860 1466 aa20.81■□□□□ 0.92
Lin54-208ENSMUST00000149714 Las1lA2BE28 776 aaKnown RBP20.8■□□□□ 0.92
Lin54-208ENSMUST00000149714 Sall2Q9QX96 1004 aa20.78■□□□□ 0.92
Lin54-208ENSMUST00000149714 Ercc6F8VPZ5 1481 aa20.78■□□□□ 0.92
Lin54-208ENSMUST00000149714 Ap3b1Q9Z1T1 1105 aa20.75■□□□□ 0.91
Lin54-208ENSMUST00000149714 Ubl4bQ9CQ84 188 aa20.74■□□□□ 0.91
Lin54-208ENSMUST00000149714 Wdr66E9Q743 1299 aa20.72■□□□□ 0.91
Lin54-208ENSMUST00000149714 Rapgef2Q8CHG7 1496 aa20.68■□□□□ 0.9
Lin54-208ENSMUST00000149714 Wdr62Q3U3T8 1523 aa20.67■□□□□ 0.9
Lin54-208ENSMUST00000149714 Plekhg3Q4VAC9 1341 aa20.65■□□□□ 0.9
Lin54-208ENSMUST00000149714 Top2aQ01320 1528 aaKnown RBP20.61■□□□□ 0.89
Lin54-208ENSMUST00000149714 Cep162Q6ZQ06 1403 aa20.58■□□□□ 0.88
Lin54-208ENSMUST00000149714 Npm1Q61937 292 aaKnown RBP20.57■□□□□ 0.88
Lin54-208ENSMUST00000149714 Dnajc5bQ9CQ94 199 aa20.57■□□□□ 0.88
Lin54-208ENSMUST00000149714 Ppargc1bQ8VHJ7 1014 aa20.56■□□□□ 0.88
Lin54-208ENSMUST00000149714 PtprkP35822 1457 aa20.51■□□□□ 0.87
Lin54-208ENSMUST00000149714 Csrnp3P59055 597 aa20.5■□□□□ 0.87
Lin54-208ENSMUST00000149714 Clip1Q922J3 1391 aa20.44■□□□□ 0.86
Lin54-208ENSMUST00000149714 Cux2P70298 1426 aa20.44■□□□□ 0.86
Lin54-208ENSMUST00000149714 1700123L14RikQ3V2K7 440 aa20.44■□□□□ 0.86
Lin54-208ENSMUST00000149714 Phldb1Q6PDH0 1371 aaKnown RBP20.43■□□□□ 0.86
Lin54-208ENSMUST00000149714 Anks4bQ8K3X6 423 aa20.42■□□□□ 0.86
Lin54-208ENSMUST00000149714 Aebp2Q9Z248 504 aaKnown RBP20.37■□□□□ 0.85
Lin54-208ENSMUST00000149714 Unc13aQ4KUS2 1712 aa20.35■□□□□ 0.85
Lin54-208ENSMUST00000149714 Ccdc18Q640L5 1455 aa20.35■□□□□ 0.85
Lin54-208ENSMUST00000149714 Cdk11bP24788 784 aaKnown RBP20.34■□□□□ 0.85
Lin54-208ENSMUST00000149714 Lamc3Q9R0B6 1581 aa20.32■□□□□ 0.84
Lin54-208ENSMUST00000149714 Nop58Q6DFW4 536 aaKnown RBP20.32■□□□□ 0.84
Lin54-208ENSMUST00000149714 Lmod2Q3UHZ5 550 aa20.31■□□□□ 0.84
Lin54-208ENSMUST00000149714 TnnQ80Z71 1560 aa20.3■□□□□ 0.84
Lin54-208ENSMUST00000149714 Camsap1A2AHC3 1581 aa20.27■□□□□ 0.84
Lin54-208ENSMUST00000149714 Arhgap35Q91YM2 1499 aa20.26■□□□□ 0.83
Lin54-208ENSMUST00000149714 Thoc2B1AZI6 1594 aaKnown RBP20.25■□□□□ 0.83
Lin54-208ENSMUST00000149714 Setd5Q5XJV7 1441 aa20.21■□□□□ 0.83
Lin54-208ENSMUST00000149714 Gm38655A0A286YDK6 273 aa20.21■□□□□ 0.83
Lin54-208ENSMUST00000149714 Baz1bQ9Z277 1479 aa20.21■□□□□ 0.83
Lin54-208ENSMUST00000149714 Grin2bQ01097 1482 aa20.17■□□□□ 0.82
Lin54-208ENSMUST00000149714 Shroom4Q1W617 1475 aa20.17■□□□□ 0.82
Lin54-208ENSMUST00000149714 ClspnQ80YR7 1315 aa20.16■□□□□ 0.82
Lin54-208ENSMUST00000149714 LrpprcQ6PB66 1392 aaKnown RBP20.14■□□□□ 0.82
Lin54-208ENSMUST00000149714 CenpbP27790 599 aa20.1■□□□□ 0.81
Lin54-208ENSMUST00000149714 Eea1Q8BL66 1411 aa20.1■□□□□ 0.81
Lin54-208ENSMUST00000149714 Dhx29Q6PGC1 1365 aaKnown RBP20.08■□□□□ 0.8
Lin54-208ENSMUST00000149714 Eid3Q3V124 375 aa20.07■□□□□ 0.8
Lin54-208ENSMUST00000149714 NrkQ9R0G8 1455 aa20.07■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms