RNA–Protein interactions for RNA: ENSMUST00000149248.8

Spg7-209, Transcript of Paraplegin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Spg7, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7-209ENSMUST00000149248 NischQ80TM9 1593 aa33.52■■■□□ 2.96
Spg7-209ENSMUST00000149248 Rhox8Q6VSS7 320 aa32.74■■■□□ 2.83
Spg7-209ENSMUST00000149248 Abcc9P70170 1546 aa32.39■■■□□ 2.78
Spg7-209ENSMUST00000149248 Gm35339A0A140LHH9 1649 aa31.97■■■□□ 2.71
Spg7-209ENSMUST00000149248 Rtl1Q7M732 1744 aa31.61■■■□□ 2.65
Spg7-209ENSMUST00000149248 Rpgrip1Q9EPQ2 1331 aa31.52■■■□□ 2.64
Spg7-209ENSMUST00000149248 Abcc8B2RUS7 1588 aa31.51■■■□□ 2.63
Spg7-209ENSMUST00000149248 Ccdc180J3QNE4 1664 aa31.49■■■□□ 2.63
Spg7-209ENSMUST00000149248 Ehmt2Q9Z148 1263 aaKnown RBP31.27■■■□□ 2.6
Spg7-209ENSMUST00000149248 Acin1Q9JIX8 1338 aaKnown RBP30.99■■■□□ 2.55
Spg7-209ENSMUST00000149248 Zcchc6Q5BLK4 1491 aaKnown RBP30.67■■■□□ 2.5
Spg7-209ENSMUST00000149248 Pcgf6Q99NA9 353 aa30.43■■■□□ 2.46
Spg7-209ENSMUST00000149248 Ccdc136Q3TVA9 1136 aa30.34■■■□□ 2.45
Spg7-209ENSMUST00000149248 HrcG5E8J6 738 aa30.18■■■□□ 2.42
Spg7-209ENSMUST00000149248 Dcaf1Q80TR8 1506 aa30.04■■■□□ 2.4
Spg7-209ENSMUST00000149248 Supt5hO55201 1082 aaKnown RBP29.81■■■□□ 2.36
Spg7-209ENSMUST00000149248 Trim41Q5NCC3 630 aa29.8■■■□□ 2.36
Spg7-209ENSMUST00000149248 Rb1cc1Q9ESK9 1588 aa29.43■■■□□ 2.3
Spg7-209ENSMUST00000149248 Neurod1Q60867 357 aa29.35■■■□□ 2.29
Spg7-209ENSMUST00000149248 Zeb1Q64318 1117 aa29.32■■■□□ 2.28
Spg7-209ENSMUST00000149248 Gab3Q8BSM5 595 aa29.11■■■□□ 2.25
Spg7-209ENSMUST00000149248 Cep164Q5DU05 1446 aa29.01■■■□□ 2.24
Spg7-209ENSMUST00000149248 ScribQ80U72 1612 aa29■■■□□ 2.23
Spg7-209ENSMUST00000149248 Baz1aO88379 1555 aa28.98■■■□□ 2.23
Spg7-209ENSMUST00000149248 Cngb1E1AZ71 1325 aa28.92■■■□□ 2.22
Spg7-209ENSMUST00000149248 Chic1Q8CBW7 227 aa28.84■■■□□ 2.21
Spg7-209ENSMUST00000149248 Mier1Q5UAK0 511 aa28.8■■■□□ 2.2
Spg7-209ENSMUST00000149248 Sall2Q9QX96 1004 aa28.79■■■□□ 2.2
Spg7-209ENSMUST00000149248 Kdm5dQ62240 1548 aa28.73■■■□□ 2.19
Spg7-209ENSMUST00000149248 NefmP08553 848 aa28.66■■■□□ 2.18
Spg7-209ENSMUST00000149248 Rsf1E9PWW9 1441 aaKnown RBP28.59■■■□□ 2.17
Spg7-209ENSMUST00000149248 Las1lA2BE28 776 aaKnown RBP28.57■■■□□ 2.16
Spg7-209ENSMUST00000149248 Csrnp3P59055 597 aa28.46■■■□□ 2.15
Spg7-209ENSMUST00000149248 1700123L14RikQ3V2K7 440 aa28.43■■■□□ 2.14
Spg7-209ENSMUST00000149248 Wdr66E9Q743 1299 aa28.41■■■□□ 2.14
Spg7-209ENSMUST00000149248 Ppargc1bQ8VHJ7 1014 aa28.37■■■□□ 2.13
Spg7-209ENSMUST00000149248 Smarca2Q6DIC0 1577 aa28.37■■■□□ 2.13
Spg7-209ENSMUST00000149248 Ccdc88bQ4QRL3 1481 aa28.3■■■□□ 2.12
Spg7-209ENSMUST00000149248 Anks4bQ8K3X6 423 aa28.29■■■□□ 2.12
Spg7-209ENSMUST00000149248 UbtfP25976 765 aaKnown RBP28.28■■■□□ 2.12
Spg7-209ENSMUST00000149248 Aebp2Q9Z248 504 aaKnown RBP28.26■■■□□ 2.11
Spg7-209ENSMUST00000149248 NacadQ5SWP3 1504 aa28.26■■■□□ 2.11
Spg7-209ENSMUST00000149248 Esf1Q3V1V3 845 aaKnown RBP28.02■■■□□ 2.08
Spg7-209ENSMUST00000149248 Cdk11bP24788 784 aaKnown RBP28.01■■■□□ 2.08
Spg7-209ENSMUST00000149248 Gm38655A0A286YDK6 273 aa28■■■□□ 2.07
Spg7-209ENSMUST00000149248 Nop58Q6DFW4 536 aaKnown RBP28■■■□□ 2.07
Spg7-209ENSMUST00000149248 Crybg2B7ZCC2 1516 aa27.96■■■□□ 2.07
Spg7-209ENSMUST00000149248 Golga3P55937 1487 aa27.93■■■□□ 2.06
Spg7-209ENSMUST00000149248 Brd4Q9ESU6 1400 aaKnown RBP27.92■■■□□ 2.06
Spg7-209ENSMUST00000149248 Cecr2E9Q2Z1 1453 aa27.89■■■□□ 2.06
Spg7-209ENSMUST00000149248 ClspnQ80YR7 1315 aa27.83■■■□□ 2.05
Spg7-209ENSMUST00000149248 Myt1lP97500 1187 aa27.82■■■□□ 2.04
Spg7-209ENSMUST00000149248 Aplp2Q06335 707 aa27.69■■■□□ 2.02
Spg7-209ENSMUST00000149248 Synj1Q8CHC4 1574 aa27.67■■■□□ 2.02
Spg7-209ENSMUST00000149248 Sycp2Q9CUU3 1500 aa27.63■■■□□ 2.01
Spg7-209ENSMUST00000149248 CenpbP27790 599 aa27.63■■■□□ 2.01
Spg7-209ENSMUST00000149248 TonslQ6NZL6 1363 aa27.62■■■□□ 2.01
Spg7-209ENSMUST00000149248 Plekhg3Q4VAC9 1341 aa27.49■■□□□ 1.99
Spg7-209ENSMUST00000149248 Npm2Q80W85 207 aa27.38■■□□□ 1.97
Spg7-209ENSMUST00000149248 CftrP26361 1476 aa27.37■■□□□ 1.97
Spg7-209ENSMUST00000149248 Rapgef2Q8CHG7 1496 aa27.31■■□□□ 1.96
Spg7-209ENSMUST00000149248 Eid3Q3V124 375 aa27.28■■□□□ 1.96
Spg7-209ENSMUST00000149248 SafbD3YXK2 937 aaKnown RBP27.26■■□□□ 1.95
Spg7-209ENSMUST00000149248 Top2bQ64511 1612 aa27.25■■□□□ 1.95
Spg7-209ENSMUST00000149248 Cc2d2aQ8CFW7 1633 aa27.25■■□□□ 1.95
Spg7-209ENSMUST00000149248 Mapk8ip2Q9ERE9 830 aa27.24■■□□□ 1.95
Spg7-209ENSMUST00000149248 Myt1Q8CFC2 1127 aa27.24■■□□□ 1.95
Spg7-209ENSMUST00000149248 Cep162Q6ZQ06 1403 aa27.23■■□□□ 1.95
Spg7-209ENSMUST00000149248 Ap3b1Q9Z1T1 1105 aa27.22■■□□□ 1.95
Spg7-209ENSMUST00000149248 Hnrnpul2Q00PI9 745 aaKnown RBP27.22■■□□□ 1.95
Spg7-209ENSMUST00000149248 Clip1Q922J3 1391 aa27.18■■□□□ 1.94
Spg7-209ENSMUST00000149248 Fam71e1A1L3C1 212 aa27.11■■□□□ 1.93
Spg7-209ENSMUST00000149248 BicraF8VPZ9 1578 aa26.99■■□□□ 1.91
Spg7-209ENSMUST00000149248 Ncapd3Q6ZQK0 1506 aa26.94■■□□□ 1.9
Spg7-209ENSMUST00000149248 Cttnbp2B9EJA2 1648 aa26.94■■□□□ 1.9
Spg7-209ENSMUST00000149248 Top2aQ01320 1528 aaKnown RBP26.94■■□□□ 1.9
Spg7-209ENSMUST00000149248 Fmn1Q05860 1466 aa26.94■■□□□ 1.9
Spg7-209ENSMUST00000149248 Tnnt3Q9QZ47 272 aa26.83■■□□□ 1.89
Spg7-209ENSMUST00000149248 DiexfQ8BTT6 772 aaKnown RBP26.7■■□□□ 1.87
Spg7-209ENSMUST00000149248 NclP09405 707 aaKnown RBP26.68■■□□□ 1.86
Spg7-209ENSMUST00000149248 Il27Q8K3I6 234 aa26.67■■□□□ 1.86
Spg7-209ENSMUST00000149248 Fam50aQ9WV03 339 aaKnown RBP26.62■■□□□ 1.85
Spg7-209ENSMUST00000149248 Smarca4Q3TKT4 1613 aaKnown RBP26.62■■□□□ 1.85
Spg7-209ENSMUST00000149248 Bcl11aQ9QYE3 773 aa26.61■■□□□ 1.85
Spg7-209ENSMUST00000149248 Znf710Q3U288 666 aa26.58■■□□□ 1.85
Spg7-209ENSMUST00000149248 Arap1Q4LDD4 1452 aa26.57■■□□□ 1.84
Spg7-209ENSMUST00000149248 Slc24a1Q91WD8 1130 aa26.56■■□□□ 1.84
Spg7-209ENSMUST00000149248 Eea1Q8BL66 1411 aa26.54■■□□□ 1.84
Spg7-209ENSMUST00000149248 Rpap1Q80TE0 1409 aa26.53■■□□□ 1.84
Spg7-209ENSMUST00000149248 Setd5Q5XJV7 1441 aa26.53■■□□□ 1.84
Spg7-209ENSMUST00000149248 Anp32aO35381 247 aa26.5■■□□□ 1.83
Spg7-209ENSMUST00000149248 Arhgap35Q91YM2 1499 aa26.5■■□□□ 1.83
Spg7-209ENSMUST00000149248 Eif4g1Q6NZJ6 1600 aaKnown RBP26.49■■□□□ 1.83
Spg7-209ENSMUST00000149248 Kdm5bQ80Y84 1544 aa26.47■■□□□ 1.83
Spg7-209ENSMUST00000149248 PtprkP35822 1457 aa26.47■■□□□ 1.83
Spg7-209ENSMUST00000149248 Lmod2Q3UHZ5 550 aa26.44■■□□□ 1.82
Spg7-209ENSMUST00000149248 Nolc1E9Q5C9 702 aaKnown RBP26.43■■□□□ 1.82
Spg7-209ENSMUST00000149248 Stra8P70278 393 aa26.4■■□□□ 1.82
Spg7-209ENSMUST00000149248 Ifnlr1Q8CGK5 535 aa26.4■■□□□ 1.82
Spg7-209ENSMUST00000149248 Baz1bQ9Z277 1479 aa26.39■■□□□ 1.82
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms