RNA–Protein interactions for RNA: ENSMUST00000129047.7

Rpusd3-204, Transcript of Mitochondrial mRNA pseudouridine synthase Rpusd3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rpusd3, Length 1,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd3-204ENSMUST00000129047 Gm35339A0A140LHH9 1649 aa45.52■■■■■ 4.88
Rpusd3-204ENSMUST00000129047 NischQ80TM9 1593 aa44.86■■■■■ 4.77
Rpusd3-204ENSMUST00000129047 Abcc8B2RUS7 1588 aa43.5■■■■■ 4.55
Rpusd3-204ENSMUST00000129047 Abcc9P70170 1546 aa43.34■■■■■ 4.53
Rpusd3-204ENSMUST00000129047 ScribQ80U72 1612 aa42.18■■■■■ 4.34
Rpusd3-204ENSMUST00000129047 NacadQ5SWP3 1504 aa40.76■■■■■ 4.12
Rpusd3-204ENSMUST00000129047 Kdm5dQ62240 1548 aa40.7■■■■■ 4.11
Rpusd3-204ENSMUST00000129047 Sycp2Q9CUU3 1500 aa40.01■■■■■ 4
Rpusd3-204ENSMUST00000129047 Dcaf1Q80TR8 1506 aa39.82■■■■□ 3.97
Rpusd3-204ENSMUST00000129047 BicraF8VPZ9 1578 aa39.55■■■■□ 3.92
Rpusd3-204ENSMUST00000129047 Dnajc5bQ9CQ94 199 aa39.24■■■■□ 3.87
Rpusd3-204ENSMUST00000129047 Rb1cc1Q9ESK9 1588 aa39.05■■■■□ 3.84
Rpusd3-204ENSMUST00000129047 Rhox8Q6VSS7 320 aa38.51■■■■□ 3.76
Rpusd3-204ENSMUST00000129047 Pds5bQ4VA53 1446 aaKnown RBP38.46■■■■□ 3.75
Rpusd3-204ENSMUST00000129047 Baz1aO88379 1555 aa38.44■■■■□ 3.74
Rpusd3-204ENSMUST00000129047 Crybg2B7ZCC2 1516 aa38.31■■■■□ 3.72
Rpusd3-204ENSMUST00000129047 Thoc2B1AZI6 1594 aaKnown RBP38.28■■■■□ 3.72
Rpusd3-204ENSMUST00000129047 Ccdc180J3QNE4 1664 aa38.2■■■■□ 3.71
Rpusd3-204ENSMUST00000129047 Zcchc6Q5BLK4 1491 aaKnown RBP38.05■■■■□ 3.68
Rpusd3-204ENSMUST00000129047 Atad2bE9Q166 1460 aaKnown RBP38.03■■■■□ 3.68
Rpusd3-204ENSMUST00000129047 Cc2d2aQ8CFW7 1633 aa37.69■■■■□ 3.62
Rpusd3-204ENSMUST00000129047 Ercc6F8VPZ5 1481 aa37.63■■■■□ 3.61
Rpusd3-204ENSMUST00000129047 Smarca2Q6DIC0 1577 aa37.58■■■■□ 3.61
Rpusd3-204ENSMUST00000129047 Smarca4Q3TKT4 1613 aaKnown RBP37.55■■■■□ 3.6
Rpusd3-204ENSMUST00000129047 Cecr2E9Q2Z1 1453 aa37.48■■■■□ 3.59
Rpusd3-204ENSMUST00000129047 Iqgap2Q3UQ44 1575 aa37.42■■■■□ 3.58
Rpusd3-204ENSMUST00000129047 Fam135aQ6NS59 1506 aa37.32■■■■□ 3.57
Rpusd3-204ENSMUST00000129047 Frmpd1A2AKB4 1549 aa37.17■■■■□ 3.54
Rpusd3-204ENSMUST00000129047 Wdr62Q3U3T8 1523 aa37.17■■■■□ 3.54
Rpusd3-204ENSMUST00000129047 Phldb1Q6PDH0 1371 aaKnown RBP37.03■■■■□ 3.52
Rpusd3-204ENSMUST00000129047 Ubl4bQ9CQ84 188 aa36.8■■■■□ 3.48
Rpusd3-204ENSMUST00000129047 Baz1bQ9Z277 1479 aa36.71■■■■□ 3.47
Rpusd3-204ENSMUST00000129047 Unc13aQ4KUS2 1712 aa36.58■■■■□ 3.45
Rpusd3-204ENSMUST00000129047 CftrP26361 1476 aa36.48■■■■□ 3.43
Rpusd3-204ENSMUST00000129047 Mrc2Q64449 1479 aa36.48■■■■□ 3.43
Rpusd3-204ENSMUST00000129047 Synj1Q8CHC4 1574 aa36.37■■■■□ 3.41
Rpusd3-204ENSMUST00000129047 Cttnbp2B9EJA2 1648 aa36.34■■■■□ 3.41
Rpusd3-204ENSMUST00000129047 Brd4Q9ESU6 1400 aaKnown RBP36.21■■■■□ 3.39
Rpusd3-204ENSMUST00000129047 Rtl1Q7M732 1744 aa36.2■■■■□ 3.39
Rpusd3-204ENSMUST00000129047 Ccdc136Q3TVA9 1136 aa36.17■■■■□ 3.38
Rpusd3-204ENSMUST00000129047 Esf1Q3V1V3 845 aaKnown RBP35.86■■■■□ 3.33
Rpusd3-204ENSMUST00000129047 Trim41Q5NCC3 630 aa35.86■■■■□ 3.33
Rpusd3-204ENSMUST00000129047 Cux2P70298 1426 aa35.79■■■■□ 3.32
Rpusd3-204ENSMUST00000129047 Dnajc5P60904 198 aa35.75■■■■□ 3.31
Rpusd3-204ENSMUST00000129047 Kif15Q6P9L6 1387 aa35.74■■■■□ 3.31
Rpusd3-204ENSMUST00000129047 Rsf1E9PWW9 1441 aaKnown RBP35.72■■■■□ 3.31
Rpusd3-204ENSMUST00000129047 Lrriq1Q0P5X1 1673 aa35.71■■■■□ 3.31
Rpusd3-204ENSMUST00000129047 Kif21aQ9QXL2 1672 aa35.56■■■■□ 3.28
Rpusd3-204ENSMUST00000129047 Lamc3Q9R0B6 1581 aa35.45■■■■□ 3.27
Rpusd3-204ENSMUST00000129047 Npm1Q61937 292 aaKnown RBP35.39■■■■□ 3.26
Rpusd3-204ENSMUST00000129047 Cep164Q5DU05 1446 aa35.19■■■■□ 3.22
Rpusd3-204ENSMUST00000129047 Eif4g3Q80XI3 1579 aaKnown RBP35.16■■■■□ 3.22
Rpusd3-204ENSMUST00000129047 Il27Q8K3I6 234 aa35.05■■■■□ 3.2
Rpusd3-204ENSMUST00000129047 Urb2E9Q7L1 1524 aaKnown RBP35.04■■■■□ 3.2
Rpusd3-204ENSMUST00000129047 Dhx29Q6PGC1 1365 aaKnown RBP35■■■■□ 3.19
Rpusd3-204ENSMUST00000129047 Plb1Q3TTY0 1478 aa34.98■■■■□ 3.19
Rpusd3-204ENSMUST00000129047 Shroom2A2ALU4 1481 aa34.96■■■■□ 3.19
Rpusd3-204ENSMUST00000129047 TnnQ80Z71 1560 aa34.92■■■■□ 3.18
Rpusd3-204ENSMUST00000129047 Ccdc18Q640L5 1455 aa34.91■■■■□ 3.18
Rpusd3-204ENSMUST00000129047 LrpprcQ6PB66 1392 aaKnown RBP34.87■■■■□ 3.17
Rpusd3-204ENSMUST00000129047 Golga3P55937 1487 aa34.84■■■■□ 3.17
Rpusd3-204ENSMUST00000129047 Top2bQ64511 1612 aa34.82■■■■□ 3.16
Rpusd3-204ENSMUST00000129047 Cngb1E1AZ71 1325 aa34.81■■■■□ 3.16
Rpusd3-204ENSMUST00000129047 Camsap1A2AHC3 1581 aa34.79■■■■□ 3.16
Rpusd3-204ENSMUST00000129047 Crocc2F6XLV1 1638 aa34.76■■■■□ 3.15
Rpusd3-204ENSMUST00000129047 Pabpn1Q8CCS6 302 aaKnown RBP34.63■■■■□ 3.13
Rpusd3-204ENSMUST00000129047 Col17a1Q07563 1470 aa34.63■■■■□ 3.13
Rpusd3-204ENSMUST00000129047 PogzQ8BZH4 1409 aaKnown RBP34.62■■■■□ 3.13
Rpusd3-204ENSMUST00000129047 Ift140E9PY46 1464 aa34.56■■■■□ 3.12
Rpusd3-204ENSMUST00000129047 Rusc2Q80U22 1514 aa34.52■■■■□ 3.12
Rpusd3-204ENSMUST00000129047 Fmn1Q05860 1466 aa34.49■■■■□ 3.11
Rpusd3-204ENSMUST00000129047 Duox2A2AQ99 1517 aa34.45■■■■□ 3.11
Rpusd3-204ENSMUST00000129047 Pelp1Q9DBD5 1123 aaKnown RBP34.44■■■■□ 3.1
Rpusd3-204ENSMUST00000129047 Disp1Q3TDN0 1521 aa34.35■■■■□ 3.09
Rpusd3-204ENSMUST00000129047 Grin2bQ01097 1482 aa34.3■■■■□ 3.08
Rpusd3-204ENSMUST00000129047 Samd9lQ69Z37 1561 aa34.17■■■■□ 3.06
Rpusd3-204ENSMUST00000129047 Nup160Q9Z0W3 1402 aaKnown RBP34.15■■■■□ 3.06
Rpusd3-204ENSMUST00000129047 Cc2d2bA0A286YDU8 1405 aa34.09■■■■□ 3.05
Rpusd3-204ENSMUST00000129047 Efcab5A0JP43 1406 aa34.08■■■■□ 3.05
Rpusd3-204ENSMUST00000129047 Setd1bQ8CFT2 1985 aa34.08■■■■□ 3.05
Rpusd3-204ENSMUST00000129047 Zcchc11B2RX14 1644 aaKnown RBP34.06■■■■□ 3.04
Rpusd3-204ENSMUST00000129047 Rad54l2Q99NG0 1466 aa34.03■■■■□ 3.04
Rpusd3-204ENSMUST00000129047 Pbrm1Q8BSQ9 1634 aaKnown RBP34.01■■■■□ 3.04
Rpusd3-204ENSMUST00000129047 Ccdc88bQ4QRL3 1481 aa33.91■■■■□ 3.02
Rpusd3-204ENSMUST00000129047 Grin2aP35436 1464 aa33.89■■■■□ 3.02
Rpusd3-204ENSMUST00000129047 Magi3Q9EQJ9 1476 aa33.88■■■■□ 3.01
Rpusd3-204ENSMUST00000129047 AqrQ8CFQ3 1481 aaKnown RBP33.85■■■■□ 3.01
Rpusd3-204ENSMUST00000129047 Fgd6Q69ZL1 1399 aa33.84■■■■□ 3.01
Rpusd3-204ENSMUST00000129047 NrkQ9R0G8 1455 aa33.79■■■■□ 3
Rpusd3-204ENSMUST00000129047 Adgrl3Q80TS3 1537 aa33.79■■■■□ 3
Rpusd3-204ENSMUST00000129047 Top2aQ01320 1528 aaKnown RBP33.76■■■■□ 3
Rpusd3-204ENSMUST00000129047 PtprkP35822 1457 aa33.75■■■□□ 2.99
Rpusd3-204ENSMUST00000129047 Gapvd1Q6PAR5 1458 aa33.69■■■□□ 2.98
Rpusd3-204ENSMUST00000129047 Pcdh10E9PXQ7 1057 aa33.69■■■□□ 2.98
Rpusd3-204ENSMUST00000129047 Chic1Q8CBW7 227 aa33.69■■■□□ 2.98
Rpusd3-204ENSMUST00000129047 Cep170Q6A065 1588 aa33.68■■■□□ 2.98
Rpusd3-204ENSMUST00000129047 Gm156Q58A37 223 aa33.68■■■□□ 2.98
Rpusd3-204ENSMUST00000129047 Pla2r1Q62028 1487 aa33.65■■■□□ 2.98
Rpusd3-204ENSMUST00000129047 Shroom4Q1W617 1475 aa33.63■■■□□ 2.97
Rpusd3-204ENSMUST00000129047 AknaQ80VW7 1404 aa33.62■■■□□ 2.97
Retrieved 100 of 22,080 RNA–protein pairs in 189.6 ms