RNA–Protein interactions for RNA: ENSMUST00000125374.7

Halr1-201, mousemouse

TSL 1 (best) BASIC

Gene Halr1, Length 391 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Halr1-201ENSMUST00000125374 Mapk8ip2Q9ERE9 830 aa17.72■□□□□ 0.43
Halr1-201ENSMUST00000125374 Chic1Q8CBW7 227 aa17.52■□□□□ 0.4
Halr1-201ENSMUST00000125374 Gm35339A0A140LHH9 1649 aa17.1■□□□□ 0.33
Halr1-201ENSMUST00000125374 NischQ80TM9 1593 aa16.77■□□□□ 0.28
Halr1-201ENSMUST00000125374 Abcc9P70170 1546 aa16.46■□□□□ 0.23
Halr1-201ENSMUST00000125374 Abcc8B2RUS7 1588 aa16.33■□□□□ 0.2
Halr1-201ENSMUST00000125374 ScribQ80U72 1612 aa15.99■□□□□ 0.15
Halr1-201ENSMUST00000125374 Phf23Q8BSN5 401 aa15.71■□□□□ 0.11
Halr1-201ENSMUST00000125374 NacadQ5SWP3 1504 aa15.41■□□□□ 0.06
Halr1-201ENSMUST00000125374 Kdm5dQ62240 1548 aa15.36■□□□□ 0.05
Halr1-201ENSMUST00000125374 Dnajc5bQ9CQ94 199 aa15.32■□□□□ 0.04
Halr1-201ENSMUST00000125374 Sycp2Q9CUU3 1500 aa15.14■□□□□ 0.01
Halr1-201ENSMUST00000125374 BicraF8VPZ9 1578 aa15.02□□□□□ -0.01
Halr1-201ENSMUST00000125374 Dcaf1Q80TR8 1506 aa14.89□□□□□ -0.03
Halr1-201ENSMUST00000125374 Gab3Q8BSM5 595 aa14.85□□□□□ -0.03
Halr1-201ENSMUST00000125374 Thoc2B1AZI6 1594 aaKnown RBP14.66□□□□□ -0.06
Halr1-201ENSMUST00000125374 Plppr3Q7TPB0 716 aa14.66□□□□□ -0.06
Halr1-201ENSMUST00000125374 Pds5bQ4VA53 1446 aaKnown RBP14.65□□□□□ -0.06
Halr1-201ENSMUST00000125374 Rb1cc1Q9ESK9 1588 aa14.57□□□□□ -0.08
Halr1-201ENSMUST00000125374 Cc2d2aQ8CFW7 1633 aa14.44□□□□□ -0.1
Halr1-201ENSMUST00000125374 Atad2bE9Q166 1460 aaKnown RBP14.44□□□□□ -0.1
Halr1-201ENSMUST00000125374 Baz1aO88379 1555 aa14.32□□□□□ -0.12
Halr1-201ENSMUST00000125374 Ercc6F8VPZ5 1481 aa14.31□□□□□ -0.12
Halr1-201ENSMUST00000125374 Crybg2B7ZCC2 1516 aa14.31□□□□□ -0.12
Halr1-201ENSMUST00000125374 Zcchc6Q5BLK4 1491 aaKnown RBP14.25□□□□□ -0.13
Halr1-201ENSMUST00000125374 Fam135aQ6NS59 1506 aa14.24□□□□□ -0.13
Halr1-201ENSMUST00000125374 Smarca2Q6DIC0 1577 aa14.23□□□□□ -0.13
Halr1-201ENSMUST00000125374 Rhox8Q6VSS7 320 aa14.2□□□□□ -0.14
Halr1-201ENSMUST00000125374 Dnajc5P60904 198 aa14.19□□□□□ -0.14
Halr1-201ENSMUST00000125374 Ccdc180J3QNE4 1664 aa14.18□□□□□ -0.14
Halr1-201ENSMUST00000125374 Senp3Q9EP97 568 aaKnown RBP14.18□□□□□ -0.14
Halr1-201ENSMUST00000125374 Smarca4Q3TKT4 1613 aaKnown RBP14.15□□□□□ -0.14
Halr1-201ENSMUST00000125374 Iqgap2Q3UQ44 1575 aa14.13□□□□□ -0.15
Halr1-201ENSMUST00000125374 Frmpd1A2AKB4 1549 aa14.1□□□□□ -0.15
Halr1-201ENSMUST00000125374 Phldb1Q6PDH0 1371 aaKnown RBP14.09□□□□□ -0.15
Halr1-201ENSMUST00000125374 Cecr2E9Q2Z1 1453 aa14.07□□□□□ -0.16
Halr1-201ENSMUST00000125374 Wdr62Q3U3T8 1523 aa14.07□□□□□ -0.16
Halr1-201ENSMUST00000125374 Ubl4bQ9CQ84 188 aa14.06□□□□□ -0.16
Halr1-201ENSMUST00000125374 Trim41Q5NCC3 630 aa14.04□□□□□ -0.16
Halr1-201ENSMUST00000125374 Baz1bQ9Z277 1479 aa13.98□□□□□ -0.17
Halr1-201ENSMUST00000125374 Mrc2Q64449 1479 aa13.93□□□□□ -0.18
Halr1-201ENSMUST00000125374 Unc13aQ4KUS2 1712 aa13.86□□□□□ -0.19
Halr1-201ENSMUST00000125374 Lrriq1Q0P5X1 1673 aa13.66□□□□□ -0.22
Halr1-201ENSMUST00000125374 CftrP26361 1476 aa13.63□□□□□ -0.23
Halr1-201ENSMUST00000125374 Rsf1E9PWW9 1441 aaKnown RBP13.6□□□□□ -0.23
Halr1-201ENSMUST00000125374 Cttnbp2B9EJA2 1648 aa13.57□□□□□ -0.24
Halr1-201ENSMUST00000125374 Synj1Q8CHC4 1574 aa13.57□□□□□ -0.24
Halr1-201ENSMUST00000125374 Cux2P70298 1426 aa13.56□□□□□ -0.24
Halr1-201ENSMUST00000125374 Kif21aQ9QXL2 1672 aa13.5□□□□□ -0.25
Halr1-201ENSMUST00000125374 Shroom2A2ALU4 1481 aa13.5□□□□□ -0.25
Halr1-201ENSMUST00000125374 Kif15Q6P9L6 1387 aa13.47□□□□□ -0.25
Halr1-201ENSMUST00000125374 Brd4Q9ESU6 1400 aaKnown RBP13.46□□□□□ -0.26
Halr1-201ENSMUST00000125374 Col17a1Q07563 1470 aa13.44□□□□□ -0.26
Halr1-201ENSMUST00000125374 Esf1Q3V1V3 845 aaKnown RBP13.43□□□□□ -0.26
Halr1-201ENSMUST00000125374 Eif4g3Q80XI3 1579 aaKnown RBP13.43□□□□□ -0.26
Halr1-201ENSMUST00000125374 Ccdc136Q3TVA9 1136 aa13.4□□□□□ -0.26
Halr1-201ENSMUST00000125374 Npm1Q61937 292 aaKnown RBP13.4□□□□□ -0.26
Halr1-201ENSMUST00000125374 Fam163aQ8CAA5 168 aa13.37□□□□□ -0.27
Halr1-201ENSMUST00000125374 Pabpn1Q8CCS6 302 aaKnown RBP13.37□□□□□ -0.27
Halr1-201ENSMUST00000125374 Urb2E9Q7L1 1524 aaKnown RBP13.3□□□□□ -0.28
Halr1-201ENSMUST00000125374 Lamc3Q9R0B6 1581 aa13.29□□□□□ -0.28
Halr1-201ENSMUST00000125374 Top2bQ64511 1612 aa13.28□□□□□ -0.28
Halr1-201ENSMUST00000125374 Cep164Q5DU05 1446 aa13.28□□□□□ -0.28
Halr1-201ENSMUST00000125374 Plb1Q3TTY0 1478 aa13.28□□□□□ -0.28
Halr1-201ENSMUST00000125374 Pelp1Q9DBD5 1123 aaKnown RBP13.27□□□□□ -0.29
Halr1-201ENSMUST00000125374 Rtl1Q7M732 1744 aa13.25□□□□□ -0.29
Halr1-201ENSMUST00000125374 Dhx29Q6PGC1 1365 aaKnown RBP13.24□□□□□ -0.29
Halr1-201ENSMUST00000125374 Il27Q8K3I6 234 aa13.22□□□□□ -0.29
Halr1-201ENSMUST00000125374 Pcdh10E9PXQ7 1057 aa13.17□□□□□ -0.3
Halr1-201ENSMUST00000125374 LrpprcQ6PB66 1392 aaKnown RBP13.14□□□□□ -0.31
Halr1-201ENSMUST00000125374 Zcchc11B2RX14 1644 aaKnown RBP13.13□□□□□ -0.31
Halr1-201ENSMUST00000125374 Crocc2F6XLV1 1638 aa13.12□□□□□ -0.31
Halr1-201ENSMUST00000125374 Rusc2Q80U22 1514 aa13.11□□□□□ -0.31
Halr1-201ENSMUST00000125374 Ccdc18Q640L5 1455 aa13.1□□□□□ -0.31
Halr1-201ENSMUST00000125374 Ift140E9PY46 1464 aa13.08□□□□□ -0.32
Halr1-201ENSMUST00000125374 PogzQ8BZH4 1409 aaKnown RBP13.02□□□□□ -0.33
Halr1-201ENSMUST00000125374 Camsap1A2AHC3 1581 aa13.02□□□□□ -0.33
Halr1-201ENSMUST00000125374 TnnQ80Z71 1560 aa13.01□□□□□ -0.33
Halr1-201ENSMUST00000125374 Ttbk1Q6PCN3 1308 aa13□□□□□ -0.33
Halr1-201ENSMUST00000125374 Arhgef5E9Q7D5 1581 aa12.98□□□□□ -0.33
Halr1-201ENSMUST00000125374 Adgrl3Q80TS3 1537 aa12.98□□□□□ -0.33
Halr1-201ENSMUST00000125374 Disp1Q3TDN0 1521 aa12.98□□□□□ -0.33
Halr1-201ENSMUST00000125374 Kcna4Q61423 654 aa12.96□□□□□ -0.33
Halr1-201ENSMUST00000125374 Duox2A2AQ99 1517 aa12.96□□□□□ -0.33
Halr1-201ENSMUST00000125374 Gm156Q58A37 223 aa12.95□□□□□ -0.34
Halr1-201ENSMUST00000125374 PtprkP35822 1457 aa12.93□□□□□ -0.34
Halr1-201ENSMUST00000125374 Setd1bQ8CFT2 1985 aa12.93□□□□□ -0.34
Halr1-201ENSMUST00000125374 Nup160Q9Z0W3 1402 aaKnown RBP12.9□□□□□ -0.34
Halr1-201ENSMUST00000125374 Golga3P55937 1487 aa12.9□□□□□ -0.34
Halr1-201ENSMUST00000125374 PtprtQ99M80 1454 aa12.9□□□□□ -0.34
Halr1-201ENSMUST00000125374 Cngb1E1AZ71 1325 aa12.89□□□□□ -0.35
Halr1-201ENSMUST00000125374 Cc2d2bA0A286YDU8 1405 aa12.89□□□□□ -0.35
Halr1-201ENSMUST00000125374 Cep170Q6A065 1588 aa12.89□□□□□ -0.35
Halr1-201ENSMUST00000125374 Gapvd1Q6PAR5 1458 aa12.88□□□□□ -0.35
Halr1-201ENSMUST00000125374 Fgd6Q69ZL1 1399 aa12.84□□□□□ -0.35
Halr1-201ENSMUST00000125374 Samd9lQ69Z37 1561 aa12.83□□□□□ -0.36
Halr1-201ENSMUST00000125374 Grin2bQ01097 1482 aa12.82□□□□□ -0.36
Halr1-201ENSMUST00000125374 Pbrm1Q8BSQ9 1634 aaKnown RBP12.81□□□□□ -0.36
Halr1-201ENSMUST00000125374 Rad54l2Q99NG0 1466 aa12.81□□□□□ -0.36
Halr1-201ENSMUST00000125374 Fmn1Q05860 1466 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms