RNA–Protein interactions for RNA: ENSMUST00000116433.1

Zkscan3-202, Transcript of Zinc finger protein with KRAB and SCAN domains 3, mousemouse

TSL 1 (best) BASIC

Gene Zkscan3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Zkscan3-202ENSMUST00000116433 Gm35339A0A140LHH9 1649 aa36.65■■■■□ 3.46
Zkscan3-202ENSMUST00000116433 NischQ80TM9 1593 aa35.95■■■■□ 3.35
Zkscan3-202ENSMUST00000116433 Abcc9P70170 1546 aa34.9■■■■□ 3.18
Zkscan3-202ENSMUST00000116433 Abcc8B2RUS7 1588 aa34.82■■■■□ 3.17
Zkscan3-202ENSMUST00000116433 ScribQ80U72 1612 aa33.68■■■□□ 2.98
Zkscan3-202ENSMUST00000116433 NacadQ5SWP3 1504 aa32.54■■■□□ 2.8
Zkscan3-202ENSMUST00000116433 Kdm5dQ62240 1548 aa32.49■■■□□ 2.79
Zkscan3-202ENSMUST00000116433 Dcaf1Q80TR8 1506 aa32.11■■■□□ 2.73
Zkscan3-202ENSMUST00000116433 Sycp2Q9CUU3 1500 aa31.9■■■□□ 2.7
Zkscan3-202ENSMUST00000116433 BicraF8VPZ9 1578 aa31.49■■■□□ 2.63
Zkscan3-202ENSMUST00000116433 Rb1cc1Q9ESK9 1588 aa31.36■■■□□ 2.61
Zkscan3-202ENSMUST00000116433 Ccdc180J3QNE4 1664 aa31.04■■■□□ 2.56
Zkscan3-202ENSMUST00000116433 Dnajc5bQ9CQ94 199 aa31.02■■■□□ 2.56
Zkscan3-202ENSMUST00000116433 Baz1aO88379 1555 aa30.93■■■□□ 2.54
Zkscan3-202ENSMUST00000116433 Rhox8Q6VSS7 320 aa30.84■■■□□ 2.53
Zkscan3-202ENSMUST00000116433 Crybg2B7ZCC2 1516 aa30.82■■■□□ 2.52
Zkscan3-202ENSMUST00000116433 Pds5bQ4VA53 1446 aaKnown RBP30.7■■■□□ 2.51
Zkscan3-202ENSMUST00000116433 Thoc2B1AZI6 1594 aaKnown RBP30.45■■■□□ 2.47
Zkscan3-202ENSMUST00000116433 Zcchc6Q5BLK4 1491 aaKnown RBP30.39■■■□□ 2.46
Zkscan3-202ENSMUST00000116433 Atad2bE9Q166 1460 aaKnown RBP30.36■■■□□ 2.45
Zkscan3-202ENSMUST00000116433 Smarca2Q6DIC0 1577 aa30.07■■■□□ 2.4
Zkscan3-202ENSMUST00000116433 Smarca4Q3TKT4 1613 aaKnown RBP30.02■■■□□ 2.4
Zkscan3-202ENSMUST00000116433 Ercc6F8VPZ5 1481 aa30.01■■■□□ 2.39
Zkscan3-202ENSMUST00000116433 Cc2d2aQ8CFW7 1633 aa29.96■■■□□ 2.39
Zkscan3-202ENSMUST00000116433 Cecr2E9Q2Z1 1453 aa29.88■■■□□ 2.37
Zkscan3-202ENSMUST00000116433 Iqgap2Q3UQ44 1575 aa29.86■■■□□ 2.37
Zkscan3-202ENSMUST00000116433 Fam135aQ6NS59 1506 aa29.73■■■□□ 2.35
Zkscan3-202ENSMUST00000116433 Wdr62Q3U3T8 1523 aa29.64■■■□□ 2.34
Zkscan3-202ENSMUST00000116433 Frmpd1A2AKB4 1549 aa29.62■■■□□ 2.33
Zkscan3-202ENSMUST00000116433 Phldb1Q6PDH0 1371 aaKnown RBP29.54■■■□□ 2.32
Zkscan3-202ENSMUST00000116433 Rtl1Q7M732 1744 aa29.53■■■□□ 2.32
Zkscan3-202ENSMUST00000116433 Baz1bQ9Z277 1479 aa29.41■■■□□ 2.3
Zkscan3-202ENSMUST00000116433 Ubl4bQ9CQ84 188 aa29.33■■■□□ 2.29
Zkscan3-202ENSMUST00000116433 Cttnbp2B9EJA2 1648 aa29.25■■■□□ 2.27
Zkscan3-202ENSMUST00000116433 Unc13aQ4KUS2 1712 aa29.24■■■□□ 2.27
Zkscan3-202ENSMUST00000116433 CftrP26361 1476 aa29.22■■■□□ 2.27
Zkscan3-202ENSMUST00000116433 Synj1Q8CHC4 1574 aa29.16■■■□□ 2.26
Zkscan3-202ENSMUST00000116433 Brd4Q9ESU6 1400 aaKnown RBP29.08■■■□□ 2.25
Zkscan3-202ENSMUST00000116433 Mrc2Q64449 1479 aa29.07■■■□□ 2.24
Zkscan3-202ENSMUST00000116433 Ccdc136Q3TVA9 1136 aa28.93■■■□□ 2.22
Zkscan3-202ENSMUST00000116433 Esf1Q3V1V3 845 aaKnown RBP28.69■■■□□ 2.18
Zkscan3-202ENSMUST00000116433 Rsf1E9PWW9 1441 aaKnown RBP28.56■■■□□ 2.16
Zkscan3-202ENSMUST00000116433 Cux2P70298 1426 aa28.55■■■□□ 2.16
Zkscan3-202ENSMUST00000116433 Kif15Q6P9L6 1387 aa28.52■■■□□ 2.16
Zkscan3-202ENSMUST00000116433 Trim41Q5NCC3 630 aa28.47■■■□□ 2.15
Zkscan3-202ENSMUST00000116433 Lamc3Q9R0B6 1581 aa28.41■■■□□ 2.14
Zkscan3-202ENSMUST00000116433 Lrriq1Q0P5X1 1673 aa28.39■■■□□ 2.14
Zkscan3-202ENSMUST00000116433 Dnajc5P60904 198 aa28.3■■■□□ 2.12
Zkscan3-202ENSMUST00000116433 Kif21aQ9QXL2 1672 aa28.28■■■□□ 2.12
Zkscan3-202ENSMUST00000116433 Npm1Q61937 292 aaKnown RBP28.28■■■□□ 2.12
Zkscan3-202ENSMUST00000116433 Top2bQ64511 1612 aa28.16■■■□□ 2.1
Zkscan3-202ENSMUST00000116433 TnnQ80Z71 1560 aa28.15■■■□□ 2.1
Zkscan3-202ENSMUST00000116433 Cep164Q5DU05 1446 aa28.13■■■□□ 2.09
Zkscan3-202ENSMUST00000116433 Golga3P55937 1487 aa28.06■■■□□ 2.08
Zkscan3-202ENSMUST00000116433 Eif4g3Q80XI3 1579 aaKnown RBP27.99■■■□□ 2.07
Zkscan3-202ENSMUST00000116433 Ccdc18Q640L5 1455 aa27.95■■■□□ 2.07
Zkscan3-202ENSMUST00000116433 Dhx29Q6PGC1 1365 aaKnown RBP27.93■■■□□ 2.06
Zkscan3-202ENSMUST00000116433 Il27Q8K3I6 234 aa27.93■■■□□ 2.06
Zkscan3-202ENSMUST00000116433 Urb2E9Q7L1 1524 aaKnown RBP27.9■■■□□ 2.06
Zkscan3-202ENSMUST00000116433 Camsap1A2AHC3 1581 aa27.9■■■□□ 2.06
Zkscan3-202ENSMUST00000116433 Plb1Q3TTY0 1478 aa27.87■■■□□ 2.05
Zkscan3-202ENSMUST00000116433 LrpprcQ6PB66 1392 aaKnown RBP27.86■■■□□ 2.05
Zkscan3-202ENSMUST00000116433 Cngb1E1AZ71 1325 aa27.84■■■□□ 2.05
Zkscan3-202ENSMUST00000116433 Shroom2A2ALU4 1481 aa27.82■■■□□ 2.04
Zkscan3-202ENSMUST00000116433 Fmn1Q05860 1466 aa27.77■■■□□ 2.04
Zkscan3-202ENSMUST00000116433 Crocc2F6XLV1 1638 aa27.74■■■□□ 2.03
Zkscan3-202ENSMUST00000116433 PogzQ8BZH4 1409 aaKnown RBP27.66■■■□□ 2.02
Zkscan3-202ENSMUST00000116433 Ift140E9PY46 1464 aa27.61■■■□□ 2.01
Zkscan3-202ENSMUST00000116433 Pabpn1Q8CCS6 302 aaKnown RBP27.57■■■□□ 2
Zkscan3-202ENSMUST00000116433 Duox2A2AQ99 1517 aa27.52■■■□□ 2
Zkscan3-202ENSMUST00000116433 Rusc2Q80U22 1514 aa27.51■■■□□ 2
Zkscan3-202ENSMUST00000116433 Col17a1Q07563 1470 aa27.49■■□□□ 1.99
Zkscan3-202ENSMUST00000116433 Grin2bQ01097 1482 aa27.47■■□□□ 1.99
Zkscan3-202ENSMUST00000116433 Disp1Q3TDN0 1521 aa27.39■■□□□ 1.98
Zkscan3-202ENSMUST00000116433 Pelp1Q9DBD5 1123 aaKnown RBP27.37■■□□□ 1.97
Zkscan3-202ENSMUST00000116433 Samd9lQ69Z37 1561 aa27.36■■□□□ 1.97
Zkscan3-202ENSMUST00000116433 Pbrm1Q8BSQ9 1634 aaKnown RBP27.31■■□□□ 1.96
Zkscan3-202ENSMUST00000116433 Top2aQ01320 1528 aaKnown RBP27.3■■□□□ 1.96
Zkscan3-202ENSMUST00000116433 Efcab5A0JP43 1406 aa27.29■■□□□ 1.96
Zkscan3-202ENSMUST00000116433 Ccdc88bQ4QRL3 1481 aa27.29■■□□□ 1.96
Zkscan3-202ENSMUST00000116433 Nup160Q9Z0W3 1402 aaKnown RBP27.27■■□□□ 1.96
Zkscan3-202ENSMUST00000116433 Cc2d2bA0A286YDU8 1405 aa27.26■■□□□ 1.95
Zkscan3-202ENSMUST00000116433 Setd1bQ8CFT2 1985 aa27.23■■□□□ 1.95
Zkscan3-202ENSMUST00000116433 NrkQ9R0G8 1455 aa27.16■■□□□ 1.94
Zkscan3-202ENSMUST00000116433 Zcchc11B2RX14 1644 aaKnown RBP27.14■■□□□ 1.94
Zkscan3-202ENSMUST00000116433 Gpatch8A2A6A1 1505 aa27.12■■□□□ 1.93
Zkscan3-202ENSMUST00000116433 Rad54l2Q99NG0 1466 aa27.12■■□□□ 1.93
Zkscan3-202ENSMUST00000116433 Magi3Q9EQJ9 1476 aa27.09■■□□□ 1.93
Zkscan3-202ENSMUST00000116433 Grin2aP35436 1464 aa27.06■■□□□ 1.92
Zkscan3-202ENSMUST00000116433 Shroom4Q1W617 1475 aa27.03■■□□□ 1.92
Zkscan3-202ENSMUST00000116433 AqrQ8CFQ3 1481 aaKnown RBP27.03■■□□□ 1.92
Zkscan3-202ENSMUST00000116433 Fgd6Q69ZL1 1399 aa27.01■■□□□ 1.92
Zkscan3-202ENSMUST00000116433 PtprkP35822 1457 aa26.97■■□□□ 1.91
Zkscan3-202ENSMUST00000116433 Chic1Q8CBW7 227 aa26.94■■□□□ 1.9
Zkscan3-202ENSMUST00000116433 SynmQ70IV5 1561 aa26.94■■□□□ 1.9
Zkscan3-202ENSMUST00000116433 Pla2r1Q62028 1487 aa26.91■■□□□ 1.9
Zkscan3-202ENSMUST00000116433 Adgrl3Q80TS3 1537 aa26.87■■□□□ 1.89
Zkscan3-202ENSMUST00000116433 Gapvd1Q6PAR5 1458 aa26.83■■□□□ 1.89
Zkscan3-202ENSMUST00000116433 Gm156Q58A37 223 aa26.81■■□□□ 1.88
Zkscan3-202ENSMUST00000116433 Cep170Q6A065 1588 aa26.8■■□□□ 1.88
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms