RNA–Protein interactions for RNA: ENSMUST00000114956.10

Scn3b-202, Transcript of Sodium channel subunit beta-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn3b, Length 4,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3b-202ENSMUST00000114956 Rpgrip1Q9EPQ2 1331 aa15.2■□□□□ 0.02
Scn3b-202ENSMUST00000114956 Rhox8Q6VSS7 320 aa14.86□□□□□ -0.03
Scn3b-202ENSMUST00000114956 NischQ80TM9 1593 aa14.8□□□□□ -0.04
Scn3b-202ENSMUST00000114956 Acin1Q9JIX8 1338 aaKnown RBP14.49□□□□□ -0.09
Scn3b-202ENSMUST00000114956 Ehmt2Q9Z148 1263 aaKnown RBP14.41□□□□□ -0.1
Scn3b-202ENSMUST00000114956 Pcgf6Q99NA9 353 aa14.33□□□□□ -0.12
Scn3b-202ENSMUST00000114956 Abcc9P70170 1546 aa14.22□□□□□ -0.13
Scn3b-202ENSMUST00000114956 Ccdc180J3QNE4 1664 aa14.19□□□□□ -0.14
Scn3b-202ENSMUST00000114956 Las1lA2BE28 776 aaKnown RBP14.15□□□□□ -0.14
Scn3b-202ENSMUST00000114956 Rtl1Q7M732 1744 aa14.14□□□□□ -0.15
Scn3b-202ENSMUST00000114956 Gm35339A0A140LHH9 1649 aa13.97□□□□□ -0.17
Scn3b-202ENSMUST00000114956 Supt5hO55201 1082 aaKnown RBP13.89□□□□□ -0.19
Scn3b-202ENSMUST00000114956 Abcc8B2RUS7 1588 aa13.82□□□□□ -0.2
Scn3b-202ENSMUST00000114956 Neurod1Q60867 357 aa13.79□□□□□ -0.2
Scn3b-202ENSMUST00000114956 Zeb1Q64318 1117 aa13.76□□□□□ -0.21
Scn3b-202ENSMUST00000114956 HrcG5E8J6 738 aa13.72□□□□□ -0.21
Scn3b-202ENSMUST00000114956 CenpbP27790 599 aa13.68□□□□□ -0.22
Scn3b-202ENSMUST00000114956 Myt1Q8CFC2 1127 aa13.68□□□□□ -0.22
Scn3b-202ENSMUST00000114956 Dcaf1Q80TR8 1506 aa13.64□□□□□ -0.23
Scn3b-202ENSMUST00000114956 Trim41Q5NCC3 630 aa13.57□□□□□ -0.24
Scn3b-202ENSMUST00000114956 Cngb1E1AZ71 1325 aa13.57□□□□□ -0.24
Scn3b-202ENSMUST00000114956 Ccdc136Q3TVA9 1136 aa13.55□□□□□ -0.24
Scn3b-202ENSMUST00000114956 NefmP08553 848 aa13.48□□□□□ -0.25
Scn3b-202ENSMUST00000114956 1700123L14RikQ3V2K7 440 aa13.46□□□□□ -0.25
Scn3b-202ENSMUST00000114956 Wdr66E9Q743 1299 aa13.44□□□□□ -0.26
Scn3b-202ENSMUST00000114956 Csrnp3P59055 597 aa13.42□□□□□ -0.26
Scn3b-202ENSMUST00000114956 Anks4bQ8K3X6 423 aa13.41□□□□□ -0.26
Scn3b-202ENSMUST00000114956 DiexfQ8BTT6 772 aaKnown RBP13.39□□□□□ -0.27
Scn3b-202ENSMUST00000114956 Cdk11bP24788 784 aaKnown RBP13.33□□□□□ -0.28
Scn3b-202ENSMUST00000114956 Sall2Q9QX96 1004 aa13.32□□□□□ -0.28
Scn3b-202ENSMUST00000114956 Zcchc6Q5BLK4 1491 aaKnown RBP13.31□□□□□ -0.28
Scn3b-202ENSMUST00000114956 Aplp2Q06335 707 aa13.27□□□□□ -0.29
Scn3b-202ENSMUST00000114956 Nop58Q6DFW4 536 aaKnown RBP13.24□□□□□ -0.29
Scn3b-202ENSMUST00000114956 Gab3Q8BSM5 595 aa13.2□□□□□ -0.3
Scn3b-202ENSMUST00000114956 Mier1Q5UAK0 511 aa13.17□□□□□ -0.3
Scn3b-202ENSMUST00000114956 Gm38655A0A286YDK6 273 aa13.13□□□□□ -0.31
Scn3b-202ENSMUST00000114956 Ppargc1bQ8VHJ7 1014 aa13.06□□□□□ -0.32
Scn3b-202ENSMUST00000114956 Bcl11aQ9QYE3 773 aa13.03□□□□□ -0.32
Scn3b-202ENSMUST00000114956 Rb1cc1Q9ESK9 1588 aa13□□□□□ -0.33
Scn3b-202ENSMUST00000114956 ClspnQ80YR7 1315 aa13□□□□□ -0.33
Scn3b-202ENSMUST00000114956 UbtfP25976 765 aaKnown RBP12.97□□□□□ -0.33
Scn3b-202ENSMUST00000114956 Pelp1Q9DBD5 1123 aaKnown RBP12.97□□□□□ -0.33
Scn3b-202ENSMUST00000114956 Cep164Q5DU05 1446 aa12.96□□□□□ -0.33
Scn3b-202ENSMUST00000114956 Tnnt3Q9QZ47 272 aa12.92□□□□□ -0.34
Scn3b-202ENSMUST00000114956 Aebp2Q9Z248 504 aaKnown RBP12.9□□□□□ -0.35
Scn3b-202ENSMUST00000114956 Fam71e1A1L3C1 212 aa12.87□□□□□ -0.35
Scn3b-202ENSMUST00000114956 Amer1Q7TS75 1132 aa12.85□□□□□ -0.35
Scn3b-202ENSMUST00000114956 Esf1Q3V1V3 845 aaKnown RBP12.84□□□□□ -0.35
Scn3b-202ENSMUST00000114956 Baz1aO88379 1555 aa12.83□□□□□ -0.35
Scn3b-202ENSMUST00000114956 TonslQ6NZL6 1363 aa12.8□□□□□ -0.36
Scn3b-202ENSMUST00000114956 Mapk8ip2Q9ERE9 830 aa12.78□□□□□ -0.36
Scn3b-202ENSMUST00000114956 Rtl5Q5DTT4 599 aa12.76□□□□□ -0.37
Scn3b-202ENSMUST00000114956 Anp32aO35381 247 aa12.74□□□□□ -0.37
Scn3b-202ENSMUST00000114956 Stra8P70278 393 aa12.71□□□□□ -0.37
Scn3b-202ENSMUST00000114956 Chic1Q8CBW7 227 aa12.7□□□□□ -0.38
Scn3b-202ENSMUST00000114956 SafbD3YXK2 937 aaKnown RBP12.67□□□□□ -0.38
Scn3b-202ENSMUST00000114956 NacadQ5SWP3 1504 aa12.66□□□□□ -0.38
Scn3b-202ENSMUST00000114956 Ttbk1Q6PCN3 1308 aa12.65□□□□□ -0.38
Scn3b-202ENSMUST00000114956 Hnrnpul2Q00PI9 745 aaKnown RBP12.65□□□□□ -0.39
Scn3b-202ENSMUST00000114956 Myt1lP97500 1187 aa12.64□□□□□ -0.39
Scn3b-202ENSMUST00000114956 Kdm5dQ62240 1548 aa12.63□□□□□ -0.39
Scn3b-202ENSMUST00000114956 PrkcshO08795 521 aa12.62□□□□□ -0.39
Scn3b-202ENSMUST00000114956 Brd4Q9ESU6 1400 aaKnown RBP12.61□□□□□ -0.39
Scn3b-202ENSMUST00000114956 Ap3b1Q9Z1T1 1105 aa12.6□□□□□ -0.39
Scn3b-202ENSMUST00000114956 Npm2Q80W85 207 aa12.54□□□□□ -0.4
Scn3b-202ENSMUST00000114956 ScribQ80U72 1612 aa12.54□□□□□ -0.4
Scn3b-202ENSMUST00000114956 Ifnlr1Q8CGK5 535 aa12.51□□□□□ -0.41
Scn3b-202ENSMUST00000114956 Rsf1E9PWW9 1441 aaKnown RBP12.5□□□□□ -0.41
Scn3b-202ENSMUST00000114956 Slc24a1Q91WD8 1130 aa12.49□□□□□ -0.41
Scn3b-202ENSMUST00000114956 Crybg2B7ZCC2 1516 aa12.49□□□□□ -0.41
Scn3b-202ENSMUST00000114956 Calr4Q3TQS0 420 aa12.46□□□□□ -0.41
Scn3b-202ENSMUST00000114956 Smarca2Q6DIC0 1577 aa12.43□□□□□ -0.42
Scn3b-202ENSMUST00000114956 Golga3P55937 1487 aa12.43□□□□□ -0.42
Scn3b-202ENSMUST00000114956 NclP09405 707 aaKnown RBP12.4□□□□□ -0.43
Scn3b-202ENSMUST00000114956 Eid3Q3V124 375 aa12.4□□□□□ -0.43
Scn3b-202ENSMUST00000114956 Plekhg3Q4VAC9 1341 aa12.37□□□□□ -0.43
Scn3b-202ENSMUST00000114956 Eif5bQ05D44 1216 aaKnown RBP12.36□□□□□ -0.43
Scn3b-202ENSMUST00000114956 Ppp4r2Q0VGB7 417 aa12.35□□□□□ -0.43
Scn3b-202ENSMUST00000114956 Nolc1E9Q5C9 702 aaKnown RBP12.32□□□□□ -0.44
Scn3b-202ENSMUST00000114956 4933416C03RikQ3V063 378 aa12.32□□□□□ -0.44
Scn3b-202ENSMUST00000114956 Wdr43Q6ZQL4 677 aaKnown RBP12.31□□□□□ -0.44
Scn3b-202ENSMUST00000114956 Supt16hQ920B9 1047 aa12.3□□□□□ -0.44
Scn3b-202ENSMUST00000114956 Ccdc88bQ4QRL3 1481 aa12.3□□□□□ -0.44
Scn3b-202ENSMUST00000114956 Hdac5Q9Z2V6 1113 aa12.27□□□□□ -0.44
Scn3b-202ENSMUST00000114956 Ccdc9Q8VC31 543 aaKnown RBP12.26□□□□□ -0.45
Scn3b-202ENSMUST00000114956 Sycp2Q9CUU3 1500 aa12.25□□□□□ -0.45
Scn3b-202ENSMUST00000114956 Ccdc27Q3V036 639 aa12.25□□□□□ -0.45
Scn3b-202ENSMUST00000114956 Clip1Q922J3 1391 aa12.22□□□□□ -0.45
Scn3b-202ENSMUST00000114956 Upf2A2AT37 1269 aaKnown RBP12.21□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Znf710Q3U288 666 aa12.2□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Ube2uB1AUC4 352 aa12.2□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Hsp90aa1P07901 733 aaKnown RBP12.18□□□□□ -0.46
Scn3b-202ENSMUST00000114956 NrdcQ8BHG1 1161 aa12.17□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Fam50aQ9WV03 339 aaKnown RBP12.17□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Irx3P81067 507 aa12.17□□□□□ -0.46
Scn3b-202ENSMUST00000114956 DaxxO35613 739 aa12.16□□□□□ -0.46
Scn3b-202ENSMUST00000114956 Gtf3c3Q3TMP1 882 aa12.15□□□□□ -0.47
Scn3b-202ENSMUST00000114956 Cecr2E9Q2Z1 1453 aa12.11□□□□□ -0.47
Scn3b-202ENSMUST00000114956 Synj1Q8CHC4 1574 aa12.1□□□□□ -0.47
Scn3b-202ENSMUST00000114956 CftrP26361 1476 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 164 ms