RNA–Protein interactions for RNA: ENSMUST00000113686.7

Tpm1-206, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 998 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-206ENSMUST00000113686 Gm35339A0A140LHH9 1649 aa47.33■■■■■ 5.17
Tpm1-206ENSMUST00000113686 NischQ80TM9 1593 aa46.64■■■■■ 5.06
Tpm1-206ENSMUST00000113686 Abcc8B2RUS7 1588 aa45.22■■■■■ 4.83
Tpm1-206ENSMUST00000113686 Abcc9P70170 1546 aa45.16■■■■■ 4.82
Tpm1-206ENSMUST00000113686 ScribQ80U72 1612 aa43.66■■■■■ 4.58
Tpm1-206ENSMUST00000113686 NacadQ5SWP3 1504 aa42.3■■■■■ 4.36
Tpm1-206ENSMUST00000113686 Kdm5dQ62240 1548 aa42.2■■■■■ 4.35
Tpm1-206ENSMUST00000113686 Dcaf1Q80TR8 1506 aa41.57■■■■■ 4.25
Tpm1-206ENSMUST00000113686 Sycp2Q9CUU3 1500 aa41.5■■■■■ 4.23
Tpm1-206ENSMUST00000113686 BicraF8VPZ9 1578 aa40.94■■■■■ 4.14
Tpm1-206ENSMUST00000113686 Rb1cc1Q9ESK9 1588 aa40.6■■■■■ 4.09
Tpm1-206ENSMUST00000113686 Dnajc5bQ9CQ94 199 aa40.22■■■■■ 4.03
Tpm1-206ENSMUST00000113686 Baz1aO88379 1555 aa40.05■■■■■ 4
Tpm1-206ENSMUST00000113686 Crybg2B7ZCC2 1516 aa40.03■■■■■ 4
Tpm1-206ENSMUST00000113686 Rhox8Q6VSS7 320 aa40.03■■■■■ 4
Tpm1-206ENSMUST00000113686 Ccdc180J3QNE4 1664 aa39.92■■■■□ 3.98
Tpm1-206ENSMUST00000113686 Pds5bQ4VA53 1446 aaKnown RBP39.85■■■■□ 3.97
Tpm1-206ENSMUST00000113686 Thoc2B1AZI6 1594 aaKnown RBP39.55■■■■□ 3.92
Tpm1-206ENSMUST00000113686 Zcchc6Q5BLK4 1491 aaKnown RBP39.48■■■■□ 3.91
Tpm1-206ENSMUST00000113686 Atad2bE9Q166 1460 aaKnown RBP39.45■■■■□ 3.91
Tpm1-206ENSMUST00000113686 Smarca4Q3TKT4 1613 aaKnown RBP38.97■■■■□ 3.83
Tpm1-206ENSMUST00000113686 Smarca2Q6DIC0 1577 aa38.94■■■■□ 3.82
Tpm1-206ENSMUST00000113686 Ercc6F8VPZ5 1481 aa38.92■■■■□ 3.82
Tpm1-206ENSMUST00000113686 Cecr2E9Q2Z1 1453 aa38.88■■■■□ 3.81
Tpm1-206ENSMUST00000113686 Cc2d2aQ8CFW7 1633 aa38.86■■■■□ 3.81
Tpm1-206ENSMUST00000113686 Iqgap2Q3UQ44 1575 aa38.79■■■■□ 3.8
Tpm1-206ENSMUST00000113686 Fam135aQ6NS59 1506 aa38.64■■■■□ 3.78
Tpm1-206ENSMUST00000113686 Wdr62Q3U3T8 1523 aa38.53■■■■□ 3.76
Tpm1-206ENSMUST00000113686 Frmpd1A2AKB4 1549 aa38.51■■■■□ 3.76
Tpm1-206ENSMUST00000113686 Phldb1Q6PDH0 1371 aaKnown RBP38.35■■■■□ 3.73
Tpm1-206ENSMUST00000113686 Baz1bQ9Z277 1479 aa38.24■■■■□ 3.71
Tpm1-206ENSMUST00000113686 CftrP26361 1476 aa37.97■■■■□ 3.67
Tpm1-206ENSMUST00000113686 Ubl4bQ9CQ84 188 aa37.97■■■■□ 3.67
Tpm1-206ENSMUST00000113686 Cttnbp2B9EJA2 1648 aa37.81■■■■□ 3.64
Tpm1-206ENSMUST00000113686 Synj1Q8CHC4 1574 aa37.8■■■■□ 3.64
Tpm1-206ENSMUST00000113686 Brd4Q9ESU6 1400 aaKnown RBP37.78■■■■□ 3.64
Tpm1-206ENSMUST00000113686 Rtl1Q7M732 1744 aa37.76■■■■□ 3.64
Tpm1-206ENSMUST00000113686 Unc13aQ4KUS2 1712 aa37.75■■■■□ 3.63
Tpm1-206ENSMUST00000113686 Mrc2Q64449 1479 aa37.71■■■■□ 3.63
Tpm1-206ENSMUST00000113686 Ccdc136Q3TVA9 1136 aa37.56■■■■□ 3.6
Tpm1-206ENSMUST00000113686 Esf1Q3V1V3 845 aaKnown RBP37.16■■■■□ 3.54
Tpm1-206ENSMUST00000113686 Rsf1E9PWW9 1441 aaKnown RBP37.1■■■■□ 3.53
Tpm1-206ENSMUST00000113686 Cux2P70298 1426 aa37.07■■■■□ 3.52
Tpm1-206ENSMUST00000113686 Kif15Q6P9L6 1387 aa37.04■■■■□ 3.52
Tpm1-206ENSMUST00000113686 Trim41Q5NCC3 630 aa37■■■■□ 3.51
Tpm1-206ENSMUST00000113686 Lamc3Q9R0B6 1581 aa36.86■■■■□ 3.49
Tpm1-206ENSMUST00000113686 Lrriq1Q0P5X1 1673 aa36.82■■■■□ 3.48
Tpm1-206ENSMUST00000113686 Dnajc5P60904 198 aa36.72■■■■□ 3.47
Tpm1-206ENSMUST00000113686 Kif21aQ9QXL2 1672 aa36.7■■■■□ 3.47
Tpm1-206ENSMUST00000113686 Npm1Q61937 292 aaKnown RBP36.63■■■■□ 3.45
Tpm1-206ENSMUST00000113686 Cep164Q5DU05 1446 aa36.51■■■■□ 3.43
Tpm1-206ENSMUST00000113686 Golga3P55937 1487 aa36.38■■■■□ 3.41
Tpm1-206ENSMUST00000113686 TnnQ80Z71 1560 aa36.38■■■■□ 3.41
Tpm1-206ENSMUST00000113686 Eif4g3Q80XI3 1579 aaKnown RBP36.32■■■■□ 3.41
Tpm1-206ENSMUST00000113686 Top2bQ64511 1612 aa36.31■■■■□ 3.4
Tpm1-206ENSMUST00000113686 Dhx29Q6PGC1 1365 aaKnown RBP36.29■■■■□ 3.4
Tpm1-206ENSMUST00000113686 Ccdc18Q640L5 1455 aa36.29■■■■□ 3.4
Tpm1-206ENSMUST00000113686 Urb2E9Q7L1 1524 aaKnown RBP36.25■■■■□ 3.39
Tpm1-206ENSMUST00000113686 LrpprcQ6PB66 1392 aaKnown RBP36.21■■■■□ 3.39
Tpm1-206ENSMUST00000113686 Plb1Q3TTY0 1478 aa36.2■■■■□ 3.39
Tpm1-206ENSMUST00000113686 Il27Q8K3I6 234 aa36.18■■■■□ 3.38
Tpm1-206ENSMUST00000113686 Camsap1A2AHC3 1581 aa36.15■■■■□ 3.38
Tpm1-206ENSMUST00000113686 Cngb1E1AZ71 1325 aa36.12■■■■□ 3.37
Tpm1-206ENSMUST00000113686 Shroom2A2ALU4 1481 aa36.1■■■■□ 3.37
Tpm1-206ENSMUST00000113686 Fmn1Q05860 1466 aa36.01■■■■□ 3.36
Tpm1-206ENSMUST00000113686 Crocc2F6XLV1 1638 aa36.01■■■■□ 3.35
Tpm1-206ENSMUST00000113686 PogzQ8BZH4 1409 aaKnown RBP35.99■■■■□ 3.35
Tpm1-206ENSMUST00000113686 Ift140E9PY46 1464 aa35.86■■■■□ 3.33
Tpm1-206ENSMUST00000113686 Duox2A2AQ99 1517 aa35.78■■■■□ 3.32
Tpm1-206ENSMUST00000113686 Rusc2Q80U22 1514 aa35.73■■■■□ 3.31
Tpm1-206ENSMUST00000113686 Grin2bQ01097 1482 aa35.69■■■■□ 3.3
Tpm1-206ENSMUST00000113686 Pabpn1Q8CCS6 302 aaKnown RBP35.66■■■■□ 3.3
Tpm1-206ENSMUST00000113686 Disp1Q3TDN0 1521 aa35.62■■■■□ 3.29
Tpm1-206ENSMUST00000113686 Col17a1Q07563 1470 aa35.62■■■■□ 3.29
Tpm1-206ENSMUST00000113686 Efcab5A0JP43 1406 aa35.51■■■■□ 3.28
Tpm1-206ENSMUST00000113686 Nup160Q9Z0W3 1402 aaKnown RBP35.48■■■■□ 3.27
Tpm1-206ENSMUST00000113686 Samd9lQ69Z37 1561 aa35.45■■■■□ 3.27
Tpm1-206ENSMUST00000113686 Cc2d2bA0A286YDU8 1405 aa35.4■■■■□ 3.26
Tpm1-206ENSMUST00000113686 Ccdc88bQ4QRL3 1481 aa35.37■■■■□ 3.25
Tpm1-206ENSMUST00000113686 Pelp1Q9DBD5 1123 aaKnown RBP35.34■■■■□ 3.25
Tpm1-206ENSMUST00000113686 Pbrm1Q8BSQ9 1634 aaKnown RBP35.32■■■■□ 3.24
Tpm1-206ENSMUST00000113686 NrkQ9R0G8 1455 aa35.27■■■■□ 3.24
Tpm1-206ENSMUST00000113686 Top2aQ01320 1528 aaKnown RBP35.26■■■■□ 3.23
Tpm1-206ENSMUST00000113686 Rad54l2Q99NG0 1466 aa35.24■■■■□ 3.23
Tpm1-206ENSMUST00000113686 Magi3Q9EQJ9 1476 aa35.19■■■■□ 3.22
Tpm1-206ENSMUST00000113686 Zcchc11B2RX14 1644 aaKnown RBP35.18■■■■□ 3.22
Tpm1-206ENSMUST00000113686 Grin2aP35436 1464 aa35.18■■■■□ 3.22
Tpm1-206ENSMUST00000113686 Setd1bQ8CFT2 1985 aa35.14■■■■□ 3.22
Tpm1-206ENSMUST00000113686 AqrQ8CFQ3 1481 aaKnown RBP35.13■■■■□ 3.21
Tpm1-206ENSMUST00000113686 Chic1Q8CBW7 227 aa35.09■■■■□ 3.21
Tpm1-206ENSMUST00000113686 PtprkP35822 1457 aa35.07■■■■□ 3.2
Tpm1-206ENSMUST00000113686 Shroom4Q1W617 1475 aa35.06■■■■□ 3.2
Tpm1-206ENSMUST00000113686 Fgd6Q69ZL1 1399 aa35.06■■■■□ 3.2
Tpm1-206ENSMUST00000113686 Gpatch8A2A6A1 1505 aa34.98■■■■□ 3.19
Tpm1-206ENSMUST00000113686 Pla2r1Q62028 1487 aa34.96■■■■□ 3.19
Tpm1-206ENSMUST00000113686 SynmQ70IV5 1561 aa34.91■■■■□ 3.18
Tpm1-206ENSMUST00000113686 Adgrl3Q80TS3 1537 aa34.83■■■■□ 3.17
Tpm1-206ENSMUST00000113686 Gapvd1Q6PAR5 1458 aa34.8■■■■□ 3.16
Tpm1-206ENSMUST00000113686 Cep170Q6A065 1588 aa34.75■■■■□ 3.15
Tpm1-206ENSMUST00000113686 Gm156Q58A37 223 aa34.73■■■■□ 3.15
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms