RNA–Protein interactions for RNA: ENSMUST00000113035.7

Uhrf1-202, Transcript of E3 ubiquitin-protein ligase UHRF1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Uhrf1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1-202ENSMUST00000113035 NischQ80TM9 1593 aa19.49■□□□□ 0.71
Uhrf1-202ENSMUST00000113035 Abcc9P70170 1546 aa18.94■□□□□ 0.62
Uhrf1-202ENSMUST00000113035 Gm35339A0A140LHH9 1649 aa18.89■□□□□ 0.62
Uhrf1-202ENSMUST00000113035 Rtl1Q7M732 1744 aa18.65■□□□□ 0.58
Uhrf1-202ENSMUST00000113035 Rhox8Q6VSS7 320 aa18.58■□□□□ 0.57
Uhrf1-202ENSMUST00000113035 Ccdc180J3QNE4 1664 aa18.41■□□□□ 0.54
Uhrf1-202ENSMUST00000113035 Abcc8B2RUS7 1588 aa18.36■□□□□ 0.53
Uhrf1-202ENSMUST00000113035 Rpgrip1Q9EPQ2 1331 aa18.23■□□□□ 0.51
Uhrf1-202ENSMUST00000113035 Zcchc6Q5BLK4 1491 aaKnown RBP17.88■□□□□ 0.45
Uhrf1-202ENSMUST00000113035 Acin1Q9JIX8 1338 aaKnown RBP17.82■□□□□ 0.44
Uhrf1-202ENSMUST00000113035 Ehmt2Q9Z148 1263 aaKnown RBP17.63■□□□□ 0.41
Uhrf1-202ENSMUST00000113035 Dcaf1Q80TR8 1506 aa17.46■□□□□ 0.39
Uhrf1-202ENSMUST00000113035 HrcG5E8J6 738 aa17.39■□□□□ 0.37
Uhrf1-202ENSMUST00000113035 Pcgf6Q99NA9 353 aa17.38■□□□□ 0.37
Uhrf1-202ENSMUST00000113035 Ccdc136Q3TVA9 1136 aa17.19■□□□□ 0.34
Uhrf1-202ENSMUST00000113035 Rb1cc1Q9ESK9 1588 aa17.14■□□□□ 0.33
Uhrf1-202ENSMUST00000113035 Trim41Q5NCC3 630 aa17■□□□□ 0.31
Uhrf1-202ENSMUST00000113035 Supt5hO55201 1082 aaKnown RBP16.99■□□□□ 0.31
Uhrf1-202ENSMUST00000113035 ScribQ80U72 1612 aa16.95■□□□□ 0.3
Uhrf1-202ENSMUST00000113035 Baz1aO88379 1555 aa16.91■□□□□ 0.3
Uhrf1-202ENSMUST00000113035 Cep164Q5DU05 1446 aa16.82■□□□□ 0.28
Uhrf1-202ENSMUST00000113035 Neurod1Q60867 357 aa16.74■□□□□ 0.27
Uhrf1-202ENSMUST00000113035 Kdm5dQ62240 1548 aa16.72■□□□□ 0.27
Uhrf1-202ENSMUST00000113035 Zeb1Q64318 1117 aa16.62■□□□□ 0.25
Uhrf1-202ENSMUST00000113035 Smarca2Q6DIC0 1577 aa16.58■□□□□ 0.25
Uhrf1-202ENSMUST00000113035 Cngb1E1AZ71 1325 aa16.49■□□□□ 0.23
Uhrf1-202ENSMUST00000113035 Rsf1E9PWW9 1441 aaKnown RBP16.47■□□□□ 0.23
Uhrf1-202ENSMUST00000113035 NefmP08553 848 aa16.47■□□□□ 0.23
Uhrf1-202ENSMUST00000113035 Gab3Q8BSM5 595 aa16.47■□□□□ 0.23
Uhrf1-202ENSMUST00000113035 NacadQ5SWP3 1504 aa16.45■□□□□ 0.22
Uhrf1-202ENSMUST00000113035 Chic1Q8CBW7 227 aa16.45■□□□□ 0.22
Uhrf1-202ENSMUST00000113035 Mier1Q5UAK0 511 aa16.43■□□□□ 0.22
Uhrf1-202ENSMUST00000113035 Las1lA2BE28 776 aaKnown RBP16.43■□□□□ 0.22
Uhrf1-202ENSMUST00000113035 Sall2Q9QX96 1004 aa16.42■□□□□ 0.22
Uhrf1-202ENSMUST00000113035 Crybg2B7ZCC2 1516 aa16.38■□□□□ 0.21
Uhrf1-202ENSMUST00000113035 Ccdc88bQ4QRL3 1481 aa16.3■□□□□ 0.2
Uhrf1-202ENSMUST00000113035 Anks4bQ8K3X6 423 aa16.24■□□□□ 0.19
Uhrf1-202ENSMUST00000113035 1700123L14RikQ3V2K7 440 aa16.24■□□□□ 0.19
Uhrf1-202ENSMUST00000113035 Csrnp3P59055 597 aa16.2■□□□□ 0.18
Uhrf1-202ENSMUST00000113035 Golga3P55937 1487 aa16.18■□□□□ 0.18
Uhrf1-202ENSMUST00000113035 Brd4Q9ESU6 1400 aaKnown RBP16.18■□□□□ 0.18
Uhrf1-202ENSMUST00000113035 Wdr66E9Q743 1299 aa16.12■□□□□ 0.17
Uhrf1-202ENSMUST00000113035 Aebp2Q9Z248 504 aaKnown RBP16.09■□□□□ 0.17
Uhrf1-202ENSMUST00000113035 Sycp2Q9CUU3 1500 aa16.09■□□□□ 0.17
Uhrf1-202ENSMUST00000113035 Cecr2E9Q2Z1 1453 aa16.09■□□□□ 0.17
Uhrf1-202ENSMUST00000113035 Synj1Q8CHC4 1574 aa16.07■□□□□ 0.16
Uhrf1-202ENSMUST00000113035 UbtfP25976 765 aaKnown RBP16.04■□□□□ 0.16
Uhrf1-202ENSMUST00000113035 Cdk11bP24788 784 aaKnown RBP16.01■□□□□ 0.15
Uhrf1-202ENSMUST00000113035 Nop58Q6DFW4 536 aaKnown RBP15.99■□□□□ 0.15
Uhrf1-202ENSMUST00000113035 ClspnQ80YR7 1315 aa15.98■□□□□ 0.15
Uhrf1-202ENSMUST00000113035 Top2bQ64511 1612 aa15.96■□□□□ 0.14
Uhrf1-202ENSMUST00000113035 Ppargc1bQ8VHJ7 1014 aa15.95■□□□□ 0.14
Uhrf1-202ENSMUST00000113035 Aplp2Q06335 707 aa15.93■□□□□ 0.14
Uhrf1-202ENSMUST00000113035 Esf1Q3V1V3 845 aaKnown RBP15.91■□□□□ 0.14
Uhrf1-202ENSMUST00000113035 Cc2d2aQ8CFW7 1633 aa15.88■□□□□ 0.13
Uhrf1-202ENSMUST00000113035 CftrP26361 1476 aa15.86■□□□□ 0.13
Uhrf1-202ENSMUST00000113035 CenpbP27790 599 aa15.86■□□□□ 0.13
Uhrf1-202ENSMUST00000113035 Rapgef2Q8CHG7 1496 aa15.85■□□□□ 0.13
Uhrf1-202ENSMUST00000113035 Gm38655A0A286YDK6 273 aa15.82■□□□□ 0.12
Uhrf1-202ENSMUST00000113035 TonslQ6NZL6 1363 aa15.81■□□□□ 0.12
Uhrf1-202ENSMUST00000113035 Myt1Q8CFC2 1127 aa15.78■□□□□ 0.12
Uhrf1-202ENSMUST00000113035 Cttnbp2B9EJA2 1648 aa15.77■□□□□ 0.12
Uhrf1-202ENSMUST00000113035 Myt1lP97500 1187 aa15.74■□□□□ 0.11
Uhrf1-202ENSMUST00000113035 BicraF8VPZ9 1578 aa15.72■□□□□ 0.11
Uhrf1-202ENSMUST00000113035 Cep162Q6ZQ06 1403 aa15.72■□□□□ 0.11
Uhrf1-202ENSMUST00000113035 Top2aQ01320 1528 aaKnown RBP15.71■□□□□ 0.1
Uhrf1-202ENSMUST00000113035 Fmn1Q05860 1466 aa15.65■□□□□ 0.1
Uhrf1-202ENSMUST00000113035 Plekhg3Q4VAC9 1341 aa15.63■□□□□ 0.09
Uhrf1-202ENSMUST00000113035 Ncapd3Q6ZQK0 1506 aa15.62■□□□□ 0.09
Uhrf1-202ENSMUST00000113035 Clip1Q922J3 1391 aa15.59■□□□□ 0.09
Uhrf1-202ENSMUST00000113035 Npm2Q80W85 207 aa15.56■□□□□ 0.08
Uhrf1-202ENSMUST00000113035 Eif4g1Q6NZJ6 1600 aaKnown RBP15.54■□□□□ 0.08
Uhrf1-202ENSMUST00000113035 Smarca4Q3TKT4 1613 aaKnown RBP15.52■□□□□ 0.08
Uhrf1-202ENSMUST00000113035 Hnrnpul2Q00PI9 745 aaKnown RBP15.52■□□□□ 0.07
Uhrf1-202ENSMUST00000113035 SafbD3YXK2 937 aaKnown RBP15.49■□□□□ 0.07
Uhrf1-202ENSMUST00000113035 Mapk8ip2Q9ERE9 830 aa15.46■□□□□ 0.07
Uhrf1-202ENSMUST00000113035 Fam71e1A1L3C1 212 aa15.46■□□□□ 0.06
Uhrf1-202ENSMUST00000113035 Eid3Q3V124 375 aa15.46■□□□□ 0.06
Uhrf1-202ENSMUST00000113035 Tnnt3Q9QZ47 272 aa15.44■□□□□ 0.06
Uhrf1-202ENSMUST00000113035 Ap3b1Q9Z1T1 1105 aa15.43■□□□□ 0.06
Uhrf1-202ENSMUST00000113035 Kdm5bQ80Y84 1544 aa15.42■□□□□ 0.06
Uhrf1-202ENSMUST00000113035 Arap1Q4LDD4 1452 aa15.37■□□□□ 0.05
Uhrf1-202ENSMUST00000113035 Arhgap35Q91YM2 1499 aa15.34■□□□□ 0.05
Uhrf1-202ENSMUST00000113035 Eea1Q8BL66 1411 aa15.3■□□□□ 0.04
Uhrf1-202ENSMUST00000113035 Rpap1Q80TE0 1409 aa15.29■□□□□ 0.04
Uhrf1-202ENSMUST00000113035 Arhgef5E9Q7D5 1581 aa15.29■□□□□ 0.04
Uhrf1-202ENSMUST00000113035 DiexfQ8BTT6 772 aaKnown RBP15.29■□□□□ 0.04
Uhrf1-202ENSMUST00000113035 Iqgap2Q3UQ44 1575 aa15.28■□□□□ 0.04
Uhrf1-202ENSMUST00000113035 Ccdc18Q640L5 1455 aa15.26■□□□□ 0.03
Uhrf1-202ENSMUST00000113035 TnnQ80Z71 1560 aa15.26■□□□□ 0.03
Uhrf1-202ENSMUST00000113035 Baz1bQ9Z277 1479 aa15.26■□□□□ 0.03
Uhrf1-202ENSMUST00000113035 PtprkP35822 1457 aa15.25■□□□□ 0.03
Uhrf1-202ENSMUST00000113035 Znf710Q3U288 666 aa15.25■□□□□ 0.03
Uhrf1-202ENSMUST00000113035 TchhA0A0B4J1F9 1599 aa15.25■□□□□ 0.03
Uhrf1-202ENSMUST00000113035 Bcl11aQ9QYE3 773 aa15.24■□□□□ 0.03
Uhrf1-202ENSMUST00000113035 Setd5Q5XJV7 1441 aa15.22■□□□□ 0.03
Uhrf1-202ENSMUST00000113035 NrkQ9R0G8 1455 aa15.21■□□□□ 0.03
Uhrf1-202ENSMUST00000113035 Tiam1Q60610 1591 aa15.2■□□□□ 0.02
Uhrf1-202ENSMUST00000113035 Anp32aO35381 247 aa15.2■□□□□ 0.02
Uhrf1-202ENSMUST00000113035 NclP09405 707 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms