RNA–Protein interactions for RNA: ENSMUST00000112519.8

Chfr-202, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Chfr, Length 3,159 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-202ENSMUST00000112519 NischQ80TM9 1593 aa25.72■■□□□ 1.71
Chfr-202ENSMUST00000112519 Gm35339A0A140LHH9 1649 aa25.21■■□□□ 1.63
Chfr-202ENSMUST00000112519 Abcc9P70170 1546 aa24.9■■□□□ 1.58
Chfr-202ENSMUST00000112519 Abcc8B2RUS7 1588 aa24.45■■□□□ 1.51
Chfr-202ENSMUST00000112519 Rhox8Q6VSS7 320 aa23.85■■□□□ 1.41
Chfr-202ENSMUST00000112519 ScribQ80U72 1612 aa22.98■■□□□ 1.27
Chfr-202ENSMUST00000112519 Rtl1Q7M732 1744 aa22.84■■□□□ 1.25
Chfr-202ENSMUST00000112519 Dcaf1Q80TR8 1506 aa22.57■■□□□ 1.2
Chfr-202ENSMUST00000112519 Rb1cc1Q9ESK9 1588 aa22.53■■□□□ 1.2
Chfr-202ENSMUST00000112519 Kdm5dQ62240 1548 aa22.49■■□□□ 1.19
Chfr-202ENSMUST00000112519 Ccdc180J3QNE4 1664 aa22.47■■□□□ 1.19
Chfr-202ENSMUST00000112519 Zcchc6Q5BLK4 1491 aaKnown RBP22.32■■□□□ 1.16
Chfr-202ENSMUST00000112519 NacadQ5SWP3 1504 aa22.23■■□□□ 1.15
Chfr-202ENSMUST00000112519 Ccdc136Q3TVA9 1136 aa22.22■■□□□ 1.15
Chfr-202ENSMUST00000112519 Baz1aO88379 1555 aa22.19■■□□□ 1.14
Chfr-202ENSMUST00000112519 Ehmt2Q9Z148 1263 aaKnown RBP21.8■■□□□ 1.08
Chfr-202ENSMUST00000112519 Sycp2Q9CUU3 1500 aa21.79■■□□□ 1.08
Chfr-202ENSMUST00000112519 Smarca2Q6DIC0 1577 aa21.68■■□□□ 1.06
Chfr-202ENSMUST00000112519 Crybg2B7ZCC2 1516 aa21.66■■□□□ 1.06
Chfr-202ENSMUST00000112519 HrcG5E8J6 738 aa21.5■■□□□ 1.03
Chfr-202ENSMUST00000112519 Trim41Q5NCC3 630 aa21.48■■□□□ 1.03
Chfr-202ENSMUST00000112519 BicraF8VPZ9 1578 aa21.42■■□□□ 1.02
Chfr-202ENSMUST00000112519 Cecr2E9Q2Z1 1453 aa21.39■■□□□ 1.02
Chfr-202ENSMUST00000112519 Rpgrip1Q9EPQ2 1331 aa21.37■■□□□ 1.01
Chfr-202ENSMUST00000112519 Cngb1E1AZ71 1325 aa21.21■□□□□ 0.99
Chfr-202ENSMUST00000112519 Acin1Q9JIX8 1338 aaKnown RBP21.19■□□□□ 0.98
Chfr-202ENSMUST00000112519 Brd4Q9ESU6 1400 aaKnown RBP21.13■□□□□ 0.97
Chfr-202ENSMUST00000112519 Synj1Q8CHC4 1574 aa21.1■□□□□ 0.97
Chfr-202ENSMUST00000112519 Chic1Q8CBW7 227 aa21.05■□□□□ 0.96
Chfr-202ENSMUST00000112519 Cep164Q5DU05 1446 aa20.99■□□□□ 0.95
Chfr-202ENSMUST00000112519 Rsf1E9PWW9 1441 aaKnown RBP20.97■□□□□ 0.95
Chfr-202ENSMUST00000112519 Esf1Q3V1V3 845 aaKnown RBP20.97■□□□□ 0.95
Chfr-202ENSMUST00000112519 CftrP26361 1476 aa20.95■□□□□ 0.94
Chfr-202ENSMUST00000112519 Gab3Q8BSM5 595 aa20.93■□□□□ 0.94
Chfr-202ENSMUST00000112519 Ccdc88bQ4QRL3 1481 aa20.9■□□□□ 0.94
Chfr-202ENSMUST00000112519 Golga3P55937 1487 aa20.89■□□□□ 0.94
Chfr-202ENSMUST00000112519 Smarca4Q3TKT4 1613 aaKnown RBP20.81■□□□□ 0.92
Chfr-202ENSMUST00000112519 Cttnbp2B9EJA2 1648 aa20.77■□□□□ 0.92
Chfr-202ENSMUST00000112519 Top2bQ64511 1612 aa20.66■□□□□ 0.9
Chfr-202ENSMUST00000112519 Cc2d2aQ8CFW7 1633 aa20.61■□□□□ 0.89
Chfr-202ENSMUST00000112519 Iqgap2Q3UQ44 1575 aa20.59■□□□□ 0.89
Chfr-202ENSMUST00000112519 Pcgf6Q99NA9 353 aa20.58■□□□□ 0.89
Chfr-202ENSMUST00000112519 Atad2bE9Q166 1460 aaKnown RBP20.47■□□□□ 0.87
Chfr-202ENSMUST00000112519 Pds5bQ4VA53 1446 aaKnown RBP20.38■□□□□ 0.85
Chfr-202ENSMUST00000112519 Fmn1Q05860 1466 aa20.34■□□□□ 0.85
Chfr-202ENSMUST00000112519 Supt5hO55201 1082 aaKnown RBP20.33■□□□□ 0.85
Chfr-202ENSMUST00000112519 Zeb1Q64318 1117 aa20.32■□□□□ 0.84
Chfr-202ENSMUST00000112519 Frmpd1A2AKB4 1549 aa20.24■□□□□ 0.83
Chfr-202ENSMUST00000112519 Top2aQ01320 1528 aaKnown RBP20.24■□□□□ 0.83
Chfr-202ENSMUST00000112519 Myt1lP97500 1187 aa20.2■□□□□ 0.82
Chfr-202ENSMUST00000112519 Wdr62Q3U3T8 1523 aa20.17■□□□□ 0.82
Chfr-202ENSMUST00000112519 Rapgef2Q8CHG7 1496 aa20.17■□□□□ 0.82
Chfr-202ENSMUST00000112519 Npm2Q80W85 207 aa20.12■□□□□ 0.81
Chfr-202ENSMUST00000112519 Il27Q8K3I6 234 aa20.12■□□□□ 0.81
Chfr-202ENSMUST00000112519 Mier1Q5UAK0 511 aa20.08■□□□□ 0.8
Chfr-202ENSMUST00000112519 Cep162Q6ZQ06 1403 aa20.06■□□□□ 0.8
Chfr-202ENSMUST00000112519 Ercc6F8VPZ5 1481 aa20.06■□□□□ 0.8
Chfr-202ENSMUST00000112519 Unc13aQ4KUS2 1712 aa20.04■□□□□ 0.8
Chfr-202ENSMUST00000112519 TnnQ80Z71 1560 aa20.04■□□□□ 0.8
Chfr-202ENSMUST00000112519 Kif15Q6P9L6 1387 aa20.02■□□□□ 0.8
Chfr-202ENSMUST00000112519 UbtfP25976 765 aaKnown RBP20■□□□□ 0.79
Chfr-202ENSMUST00000112519 PtprkP35822 1457 aa19.94■□□□□ 0.78
Chfr-202ENSMUST00000112519 Lamc3Q9R0B6 1581 aa19.94■□□□□ 0.78
Chfr-202ENSMUST00000112519 NefmP08553 848 aa19.88■□□□□ 0.77
Chfr-202ENSMUST00000112519 Eif4g1Q6NZJ6 1600 aaKnown RBP19.84■□□□□ 0.77
Chfr-202ENSMUST00000112519 Camsap1A2AHC3 1581 aa19.81■□□□□ 0.76
Chfr-202ENSMUST00000112519 Plekhg3Q4VAC9 1341 aa19.8■□□□□ 0.76
Chfr-202ENSMUST00000112519 Thoc2B1AZI6 1594 aaKnown RBP19.79■□□□□ 0.76
Chfr-202ENSMUST00000112519 Arhgap35Q91YM2 1499 aa19.79■□□□□ 0.76
Chfr-202ENSMUST00000112519 Neurod1Q60867 357 aa19.78■□□□□ 0.76
Chfr-202ENSMUST00000112519 Ubl4bQ9CQ84 188 aa19.78■□□□□ 0.76
Chfr-202ENSMUST00000112519 Wdr66E9Q743 1299 aa19.77■□□□□ 0.76
Chfr-202ENSMUST00000112519 Clip1Q922J3 1391 aa19.77■□□□□ 0.76
Chfr-202ENSMUST00000112519 Sall2Q9QX96 1004 aa19.76■□□□□ 0.75
Chfr-202ENSMUST00000112519 Phldb1Q6PDH0 1371 aaKnown RBP19.75■□□□□ 0.75
Chfr-202ENSMUST00000112519 Ppargc1bQ8VHJ7 1014 aa19.75■□□□□ 0.75
Chfr-202ENSMUST00000112519 Ap3b1Q9Z1T1 1105 aa19.73■□□□□ 0.75
Chfr-202ENSMUST00000112519 NrkQ9R0G8 1455 aa19.71■□□□□ 0.75
Chfr-202ENSMUST00000112519 Cux2P70298 1426 aa19.71■□□□□ 0.75
Chfr-202ENSMUST00000112519 Ccdc18Q640L5 1455 aa19.7■□□□□ 0.74
Chfr-202ENSMUST00000112519 Shroom4Q1W617 1475 aa19.7■□□□□ 0.74
Chfr-202ENSMUST00000112519 Grin2bQ01097 1482 aa19.67■□□□□ 0.74
Chfr-202ENSMUST00000112519 Npm1Q61937 292 aaKnown RBP19.64■□□□□ 0.73
Chfr-202ENSMUST00000112519 Las1lA2BE28 776 aaKnown RBP19.6■□□□□ 0.73
Chfr-202ENSMUST00000112519 Arap1Q4LDD4 1452 aa19.57■□□□□ 0.72
Chfr-202ENSMUST00000112519 Baz1bQ9Z277 1479 aa19.57■□□□□ 0.72
Chfr-202ENSMUST00000112519 Setd5Q5XJV7 1441 aa19.54■□□□□ 0.72
Chfr-202ENSMUST00000112519 Eea1Q8BL66 1411 aa19.54■□□□□ 0.72
Chfr-202ENSMUST00000112519 Fam135aQ6NS59 1506 aa19.53■□□□□ 0.72
Chfr-202ENSMUST00000112519 Dnajc5bQ9CQ94 199 aa19.52■□□□□ 0.72
Chfr-202ENSMUST00000112519 Aebp2Q9Z248 504 aaKnown RBP19.52■□□□□ 0.72
Chfr-202ENSMUST00000112519 Mroh2bQ7M6Y6 1581 aa19.51■□□□□ 0.71
Chfr-202ENSMUST00000112519 LrpprcQ6PB66 1392 aaKnown RBP19.49■□□□□ 0.71
Chfr-202ENSMUST00000112519 Map3k1P53349 1493 aa19.47■□□□□ 0.71
Chfr-202ENSMUST00000112519 Duox2A2AQ99 1517 aa19.44■□□□□ 0.7
Chfr-202ENSMUST00000112519 Arhgef5E9Q7D5 1581 aa19.42■□□□□ 0.7
Chfr-202ENSMUST00000112519 PogzQ8BZH4 1409 aaKnown RBP19.42■□□□□ 0.7
Chfr-202ENSMUST00000112519 AqrQ8CFQ3 1481 aaKnown RBP19.39■□□□□ 0.69
Chfr-202ENSMUST00000112519 Ankrd26Q811D2 1581 aa19.38■□□□□ 0.69
Chfr-202ENSMUST00000112519 Efcab5A0JP43 1406 aa19.38■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 41.9 ms