RNA–Protein interactions for RNA: ENSMUST00000112366.7

Scn1a-203, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,386 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-203ENSMUST00000112366 Cngb1E1AZ71 1325 aa9.36□□□□□ -0.91
Scn1a-203ENSMUST00000112366 Rhox8Q6VSS7 320 aa9.3□□□□□ -0.92
Scn1a-203ENSMUST00000112366 Rpgrip1Q9EPQ2 1331 aa9.28□□□□□ -0.92
Scn1a-203ENSMUST00000112366 Las1lA2BE28 776 aaKnown RBP9.28□□□□□ -0.92
Scn1a-203ENSMUST00000112366 Pelp1Q9DBD5 1123 aaKnown RBP9.25□□□□□ -0.93
Scn1a-203ENSMUST00000112366 Amer1Q7TS75 1132 aa8.95□□□□□ -0.98
Scn1a-203ENSMUST00000112366 4930567H17RikQ3V0K5 233 aa8.82□□□□□ -1
Scn1a-203ENSMUST00000112366 Wdr66E9Q743 1299 aa8.79□□□□□ -1
Scn1a-203ENSMUST00000112366 CenpbP27790 599 aa8.72□□□□□ -1.01
Scn1a-203ENSMUST00000112366 Ehmt2Q9Z148 1263 aaKnown RBP8.59□□□□□ -1.03
Scn1a-203ENSMUST00000112366 Myt1Q8CFC2 1127 aa8.58□□□□□ -1.04
Scn1a-203ENSMUST00000112366 Zeb1Q64318 1117 aa8.52□□□□□ -1.05
Scn1a-203ENSMUST00000112366 Ube2uB1AUC4 352 aa8.49□□□□□ -1.05
Scn1a-203ENSMUST00000112366 Stra8P70278 393 aa8.47□□□□□ -1.05
Scn1a-203ENSMUST00000112366 Ttbk1Q6PCN3 1308 aa8.42□□□□□ -1.06
Scn1a-203ENSMUST00000112366 4933416C03RikQ3V063 378 aa8.41□□□□□ -1.06
Scn1a-203ENSMUST00000112366 Rtl5Q5DTT4 599 aa8.22□□□□□ -1.09
Scn1a-203ENSMUST00000112366 NefmP08553 848 aa8.21□□□□□ -1.09
Scn1a-203ENSMUST00000112366 DiexfQ8BTT6 772 aaKnown RBP8.2□□□□□ -1.1
Scn1a-203ENSMUST00000112366 Tnnt3Q9QZ47 272 aa8.2□□□□□ -1.1
Scn1a-203ENSMUST00000112366 Slc24a1Q91WD8 1130 aa8.19□□□□□ -1.1
Scn1a-203ENSMUST00000112366 NeflP08551 543 aa8.17□□□□□ -1.1
Scn1a-203ENSMUST00000112366 Acin1Q9JIX8 1338 aaKnown RBP8.17□□□□□ -1.1
Scn1a-203ENSMUST00000112366 Cdk11bP24788 784 aaKnown RBP8.15□□□□□ -1.1
Scn1a-203ENSMUST00000112366 Esf1Q3V1V3 845 aaKnown RBP8.14□□□□□ -1.11
Scn1a-203ENSMUST00000112366 Npm2Q80W85 207 aa8.12□□□□□ -1.11
Scn1a-203ENSMUST00000112366 Ythdc1E9Q5K9 736 aaKnown RBP8.09□□□□□ -1.11
Scn1a-203ENSMUST00000112366 Gab3Q8BSM5 595 aa8.08□□□□□ -1.12
Scn1a-203ENSMUST00000112366 Anp32bQ9EST5 272 aaKnown RBP8.08□□□□□ -1.12
Scn1a-203ENSMUST00000112366 NrdcQ8BHG1 1161 aa8.07□□□□□ -1.12
Scn1a-203ENSMUST00000112366 Ccdc136Q3TVA9 1136 aa8.03□□□□□ -1.12
Scn1a-203ENSMUST00000112366 HrcG5E8J6 738 aa8.02□□□□□ -1.13
Scn1a-203ENSMUST00000112366 Myt1lP97500 1187 aa8.02□□□□□ -1.13
Scn1a-203ENSMUST00000112366 Nop58Q6DFW4 536 aaKnown RBP7.98□□□□□ -1.13
Scn1a-203ENSMUST00000112366 Trim41Q5NCC3 630 aa7.97□□□□□ -1.13
Scn1a-203ENSMUST00000112366 DaxxO35613 739 aa7.95□□□□□ -1.14
Scn1a-203ENSMUST00000112366 CatipB9EKE5 520 aa7.95□□□□□ -1.14
Scn1a-203ENSMUST00000112366 UbtfP25976 765 aaKnown RBP7.94□□□□□ -1.14
Scn1a-203ENSMUST00000112366 Eif5bQ05D44 1216 aaKnown RBP7.94□□□□□ -1.14
Scn1a-203ENSMUST00000112366 Pcgf6Q99NA9 353 aa7.94□□□□□ -1.14
Scn1a-203ENSMUST00000112366 Anp32aO35381 247 aa7.87□□□□□ -1.15
Scn1a-203ENSMUST00000112366 NclP09405 707 aaKnown RBP7.84□□□□□ -1.15
Scn1a-203ENSMUST00000112366 Upf2A2AT37 1269 aaKnown RBP7.78□□□□□ -1.16
Scn1a-203ENSMUST00000112366 Os9Q8K2C7 672 aa7.77□□□□□ -1.17
Scn1a-203ENSMUST00000112366 Ccdc9Q8VC31 543 aaKnown RBP7.76□□□□□ -1.17
Scn1a-203ENSMUST00000112366 Neurod1Q60867 357 aa7.75□□□□□ -1.17
Scn1a-203ENSMUST00000112366 Lmod3E9QA62 571 aa7.75□□□□□ -1.17
Scn1a-203ENSMUST00000112366 Ccdc180J3QNE4 1664 aa7.74□□□□□ -1.17
Scn1a-203ENSMUST00000112366 TonslQ6NZL6 1363 aa7.7□□□□□ -1.18
Scn1a-203ENSMUST00000112366 Fam50aQ9WV03 339 aaKnown RBP7.69□□□□□ -1.18
Scn1a-203ENSMUST00000112366 Supt5hO55201 1082 aaKnown RBP7.69□□□□□ -1.18
Scn1a-203ENSMUST00000112366 Rtl1Q7M732 1744 aa7.67□□□□□ -1.18
Scn1a-203ENSMUST00000112366 Hsp90aa1P07901 733 aaKnown RBP7.66□□□□□ -1.18
Scn1a-203ENSMUST00000112366 Ppargc1bQ8VHJ7 1014 aa7.63□□□□□ -1.19
Scn1a-203ENSMUST00000112366 Trim44Q9QXA7 346 aa7.63□□□□□ -1.19
Scn1a-203ENSMUST00000112366 ArxO35085 564 aa7.61□□□□□ -1.19
Scn1a-203ENSMUST00000112366 ClspnQ80YR7 1315 aa7.6□□□□□ -1.19
Scn1a-203ENSMUST00000112366 Aplp2Q06335 707 aa7.59□□□□□ -1.19
Scn1a-203ENSMUST00000112366 Nlrp6Q91WS2 869 aa7.56□□□□□ -1.2
Scn1a-203ENSMUST00000112366 DekQ7TNV0 380 aaKnown RBP7.56□□□□□ -1.2
Scn1a-203ENSMUST00000112366 Polr3glQ8R0C0 218 aa7.53□□□□□ -1.2
Scn1a-203ENSMUST00000112366 Tnnt2P50752 301 aa7.52□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Anks4bQ8K3X6 423 aa7.52□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Adam1bQ8R534 806 aa7.51□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Ap3b1Q9Z1T1 1105 aa7.49□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Csrnp3P59055 597 aa7.49□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Ppp4r2Q0VGB7 417 aa7.49□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Calr4Q3TQS0 420 aa7.48□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Gm38655A0A286YDK6 273 aa7.47□□□□□ -1.21
Scn1a-203ENSMUST00000112366 PtmaP26350 111 aa7.47□□□□□ -1.21
Scn1a-203ENSMUST00000112366 Wdr43Q6ZQL4 677 aaKnown RBP7.46□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Vsig10D3YX43 558 aa7.45□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Il27Q8K3I6 234 aa7.45□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Mier1Q5UAK0 511 aa7.44□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Znf316Q6PGE4 1016 aa7.43□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Htatsf1Q8BGC0 757 aa7.43□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Hdac5Q9Z2V6 1113 aa7.43□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Chic1Q8CBW7 227 aa7.42□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Ccdc27Q3V036 639 aa7.41□□□□□ -1.22
Scn1a-203ENSMUST00000112366 CanxP35564 591 aaKnown RBP7.41□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Calcoco2A2A6M5 331 aa7.4□□□□□ -1.22
Scn1a-203ENSMUST00000112366 Gm13697A2AK42 830 aa7.4□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Hsp90ab1P11499 724 aaKnown RBP7.39□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Irx3P81067 507 aa7.39□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Mak16Q8BGS0 296 aaKnown RBP7.39□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Bcl11aQ9QYE3 773 aa7.38□□□□□ -1.23
Scn1a-203ENSMUST00000112366 SetQ9EQU5 289 aaKnown RBP7.37□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Hnrnpul2Q00PI9 745 aaKnown RBP7.37□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Znf326O88291 580 aa7.36□□□□□ -1.23
Scn1a-203ENSMUST00000112366 AU015836B2RUM3 263 aa7.35□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Plcb2A3KGF7 1181 aa7.35□□□□□ -1.23
Scn1a-203ENSMUST00000112366 PnnO35691 725 aaKnown RBP7.34□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Atp1b4Q99ME6 356 aa7.34□□□□□ -1.23
Scn1a-203ENSMUST00000112366 Trim30dE9PWL0 497 aa7.34□□□□□ -1.24
Scn1a-203ENSMUST00000112366 Fgd1P52734 960 aa7.34□□□□□ -1.24
Scn1a-203ENSMUST00000112366 Zbtb7cQ8VCZ7 619 aa7.34□□□□□ -1.24
Scn1a-203ENSMUST00000112366 MsnP26041 577 aaKnown RBP7.33□□□□□ -1.24
Scn1a-203ENSMUST00000112366 Zbtb4Q5F293 982 aa7.33□□□□□ -1.24
Scn1a-203ENSMUST00000112366 Prdm10Q3UTQ7 1184 aa7.32□□□□□ -1.24
Scn1a-203ENSMUST00000112366 Map7d2A2AG50 781 aa7.32□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms