RNA–Protein interactions for RNA: ENSMUST00000109013.8

Shroom1-204, Transcript of Protein Shroom1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Shroom1, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1-204ENSMUST00000109013 NischQ80TM9 1593 aa28.63■■■□□ 2.17
Shroom1-204ENSMUST00000109013 Rhox8Q6VSS7 320 aa27.85■■■□□ 2.05
Shroom1-204ENSMUST00000109013 Abcc9P70170 1546 aa27.54■■■□□ 2
Shroom1-204ENSMUST00000109013 Gm35339A0A140LHH9 1649 aa27.3■■□□□ 1.96
Shroom1-204ENSMUST00000109013 Abcc8B2RUS7 1588 aa26.98■■□□□ 1.91
Shroom1-204ENSMUST00000109013 Rtl1Q7M732 1744 aa25.87■■□□□ 1.73
Shroom1-204ENSMUST00000109013 Ccdc136Q3TVA9 1136 aa25.82■■□□□ 1.72
Shroom1-204ENSMUST00000109013 Ccdc180J3QNE4 1664 aa25.76■■□□□ 1.71
Shroom1-204ENSMUST00000109013 Ehmt2Q9Z148 1263 aaKnown RBP25.67■■□□□ 1.7
Shroom1-204ENSMUST00000109013 Zcchc6Q5BLK4 1491 aaKnown RBP25.25■■□□□ 1.63
Shroom1-204ENSMUST00000109013 Rb1cc1Q9ESK9 1588 aa25.1■■□□□ 1.61
Shroom1-204ENSMUST00000109013 ScribQ80U72 1612 aa25.06■■□□□ 1.6
Shroom1-204ENSMUST00000109013 Trim41Q5NCC3 630 aa24.99■■□□□ 1.59
Shroom1-204ENSMUST00000109013 Rpgrip1Q9EPQ2 1331 aa24.9■■□□□ 1.58
Shroom1-204ENSMUST00000109013 HrcG5E8J6 738 aa24.89■■□□□ 1.58
Shroom1-204ENSMUST00000109013 Dcaf1Q80TR8 1506 aa24.83■■□□□ 1.56
Shroom1-204ENSMUST00000109013 Kdm5dQ62240 1548 aa24.78■■□□□ 1.56
Shroom1-204ENSMUST00000109013 Acin1Q9JIX8 1338 aaKnown RBP24.77■■□□□ 1.56
Shroom1-204ENSMUST00000109013 Baz1aO88379 1555 aa24.66■■□□□ 1.54
Shroom1-204ENSMUST00000109013 Cngb1E1AZ71 1325 aa24.64■■□□□ 1.54
Shroom1-204ENSMUST00000109013 Gab3Q8BSM5 595 aa24.59■■□□□ 1.53
Shroom1-204ENSMUST00000109013 NacadQ5SWP3 1504 aa24.48■■□□□ 1.51
Shroom1-204ENSMUST00000109013 Chic1Q8CBW7 227 aa24.25■■□□□ 1.47
Shroom1-204ENSMUST00000109013 Esf1Q3V1V3 845 aaKnown RBP24.22■■□□□ 1.47
Shroom1-204ENSMUST00000109013 Cep164Q5DU05 1446 aa24.05■■□□□ 1.44
Shroom1-204ENSMUST00000109013 Pcgf6Q99NA9 353 aa24.04■■□□□ 1.44
Shroom1-204ENSMUST00000109013 Smarca2Q6DIC0 1577 aa24.04■■□□□ 1.44
Shroom1-204ENSMUST00000109013 Rsf1E9PWW9 1441 aaKnown RBP23.93■■□□□ 1.42
Shroom1-204ENSMUST00000109013 Sycp2Q9CUU3 1500 aa23.92■■□□□ 1.42
Shroom1-204ENSMUST00000109013 Cecr2E9Q2Z1 1453 aa23.88■■□□□ 1.41
Shroom1-204ENSMUST00000109013 Zeb1Q64318 1117 aa23.88■■□□□ 1.41
Shroom1-204ENSMUST00000109013 Crybg2B7ZCC2 1516 aa23.83■■□□□ 1.4
Shroom1-204ENSMUST00000109013 Brd4Q9ESU6 1400 aaKnown RBP23.8■■□□□ 1.4
Shroom1-204ENSMUST00000109013 Supt5hO55201 1082 aaKnown RBP23.79■■□□□ 1.4
Shroom1-204ENSMUST00000109013 Ccdc88bQ4QRL3 1481 aa23.77■■□□□ 1.4
Shroom1-204ENSMUST00000109013 Myt1lP97500 1187 aa23.67■■□□□ 1.38
Shroom1-204ENSMUST00000109013 Mier1Q5UAK0 511 aa23.61■■□□□ 1.37
Shroom1-204ENSMUST00000109013 Golga3P55937 1487 aa23.6■■□□□ 1.37
Shroom1-204ENSMUST00000109013 UbtfP25976 765 aaKnown RBP23.6■■□□□ 1.37
Shroom1-204ENSMUST00000109013 Synj1Q8CHC4 1574 aa23.54■■□□□ 1.36
Shroom1-204ENSMUST00000109013 Npm2Q80W85 207 aa23.43■■□□□ 1.34
Shroom1-204ENSMUST00000109013 BicraF8VPZ9 1578 aa23.38■■□□□ 1.33
Shroom1-204ENSMUST00000109013 CftrP26361 1476 aa23.37■■□□□ 1.33
Shroom1-204ENSMUST00000109013 NefmP08553 848 aa23.31■■□□□ 1.32
Shroom1-204ENSMUST00000109013 Ppargc1bQ8VHJ7 1014 aa23.26■■□□□ 1.31
Shroom1-204ENSMUST00000109013 Wdr66E9Q743 1299 aa23.25■■□□□ 1.31
Shroom1-204ENSMUST00000109013 Il27Q8K3I6 234 aa23.2■■□□□ 1.3
Shroom1-204ENSMUST00000109013 Sall2Q9QX96 1004 aa23.15■■□□□ 1.3
Shroom1-204ENSMUST00000109013 Plekhg3Q4VAC9 1341 aa23.12■■□□□ 1.29
Shroom1-204ENSMUST00000109013 Neurod1Q60867 357 aa23.08■■□□□ 1.29
Shroom1-204ENSMUST00000109013 Ap3b1Q9Z1T1 1105 aa23.05■■□□□ 1.28
Shroom1-204ENSMUST00000109013 Las1lA2BE28 776 aaKnown RBP23.03■■□□□ 1.28
Shroom1-204ENSMUST00000109013 Cc2d2aQ8CFW7 1633 aa23.03■■□□□ 1.28
Shroom1-204ENSMUST00000109013 Cttnbp2B9EJA2 1648 aa22.99■■□□□ 1.27
Shroom1-204ENSMUST00000109013 Smarca4Q3TKT4 1613 aaKnown RBP22.95■■□□□ 1.26
Shroom1-204ENSMUST00000109013 Top2bQ64511 1612 aa22.93■■□□□ 1.26
Shroom1-204ENSMUST00000109013 Aebp2Q9Z248 504 aaKnown RBP22.92■■□□□ 1.26
Shroom1-204ENSMUST00000109013 Rapgef2Q8CHG7 1496 aa22.87■■□□□ 1.25
Shroom1-204ENSMUST00000109013 Cep162Q6ZQ06 1403 aa22.85■■□□□ 1.25
Shroom1-204ENSMUST00000109013 Fmn1Q05860 1466 aa22.84■■□□□ 1.25
Shroom1-204ENSMUST00000109013 Clip1Q922J3 1391 aa22.84■■□□□ 1.25
Shroom1-204ENSMUST00000109013 Eid3Q3V124 375 aa22.72■■□□□ 1.23
Shroom1-204ENSMUST00000109013 Iqgap2Q3UQ44 1575 aa22.71■■□□□ 1.23
Shroom1-204ENSMUST00000109013 TonslQ6NZL6 1363 aa22.67■■□□□ 1.22
Shroom1-204ENSMUST00000109013 Top2aQ01320 1528 aaKnown RBP22.67■■□□□ 1.22
Shroom1-204ENSMUST00000109013 Kif15Q6P9L6 1387 aa22.55■■□□□ 1.2
Shroom1-204ENSMUST00000109013 Atad2bE9Q166 1460 aaKnown RBP22.54■■□□□ 1.2
Shroom1-204ENSMUST00000109013 Lmod2Q3UHZ5 550 aa22.54■■□□□ 1.2
Shroom1-204ENSMUST00000109013 Nop58Q6DFW4 536 aaKnown RBP22.53■■□□□ 1.2
Shroom1-204ENSMUST00000109013 ClspnQ80YR7 1315 aa22.5■■□□□ 1.19
Shroom1-204ENSMUST00000109013 Cdk11bP24788 784 aaKnown RBP22.49■■□□□ 1.19
Shroom1-204ENSMUST00000109013 Fam50aQ9WV03 339 aaKnown RBP22.49■■□□□ 1.19
Shroom1-204ENSMUST00000109013 PtprkP35822 1457 aa22.45■■□□□ 1.18
Shroom1-204ENSMUST00000109013 Pds5bQ4VA53 1446 aaKnown RBP22.44■■□□□ 1.18
Shroom1-204ENSMUST00000109013 Mapk8ip2Q9ERE9 830 aa22.44■■□□□ 1.18
Shroom1-204ENSMUST00000109013 Setd5Q5XJV7 1441 aa22.44■■□□□ 1.18
Shroom1-204ENSMUST00000109013 Csrnp3P59055 597 aa22.42■■□□□ 1.18
Shroom1-204ENSMUST00000109013 Eea1Q8BL66 1411 aa22.35■■□□□ 1.17
Shroom1-204ENSMUST00000109013 Arhgap35Q91YM2 1499 aa22.32■■□□□ 1.16
Shroom1-204ENSMUST00000109013 Frmpd1A2AKB4 1549 aa22.31■■□□□ 1.16
Shroom1-204ENSMUST00000109013 Npm1Q61937 292 aaKnown RBP22.31■■□□□ 1.16
Shroom1-204ENSMUST00000109013 Anks4bQ8K3X6 423 aa22.3■■□□□ 1.16
Shroom1-204ENSMUST00000109013 Ube2uB1AUC4 352 aa22.29■■□□□ 1.16
Shroom1-204ENSMUST00000109013 BlmO88700 1416 aa22.29■■□□□ 1.16
Shroom1-204ENSMUST00000109013 Gm38655A0A286YDK6 273 aa22.28■■□□□ 1.16
Shroom1-204ENSMUST00000109013 Ubl4bQ9CQ84 188 aa22.27■■□□□ 1.16
Shroom1-204ENSMUST00000109013 Arap1Q4LDD4 1452 aa22.23■■□□□ 1.15
Shroom1-204ENSMUST00000109013 Ercc6F8VPZ5 1481 aa22.19■■□□□ 1.14
Shroom1-204ENSMUST00000109013 Ncapd3Q6ZQK0 1506 aa22.17■■□□□ 1.14
Shroom1-204ENSMUST00000109013 NclP09405 707 aaKnown RBP22.16■■□□□ 1.14
Shroom1-204ENSMUST00000109013 1700123L14RikQ3V2K7 440 aa22.14■■□□□ 1.13
Shroom1-204ENSMUST00000109013 Ccdc18Q640L5 1455 aa22.12■■□□□ 1.13
Shroom1-204ENSMUST00000109013 Wdr62Q3U3T8 1523 aa22.12■■□□□ 1.13
Shroom1-204ENSMUST00000109013 Baz1bQ9Z277 1479 aa22.11■■□□□ 1.13
Shroom1-204ENSMUST00000109013 Shroom4Q1W617 1475 aa22.08■■□□□ 1.12
Shroom1-204ENSMUST00000109013 TnnQ80Z71 1560 aa22.05■■□□□ 1.12
Shroom1-204ENSMUST00000109013 NrkQ9R0G8 1455 aa22.05■■□□□ 1.12
Shroom1-204ENSMUST00000109013 Eif4g1Q6NZJ6 1600 aaKnown RBP22.04■■□□□ 1.12
Shroom1-204ENSMUST00000109013 Cux2P70298 1426 aa22.03■■□□□ 1.12
Shroom1-204ENSMUST00000109013 AqrQ8CFQ3 1481 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 89 ms