RNA–Protein interactions for RNA: ENSMUST00000107700.3

Snf8-202, Transcript of Vacuolar-sorting protein SNF8, mousemouse

TSL 2 BASIC

Gene Snf8, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8-202ENSMUST00000107700 Gm35339A0A140LHH9 1649 aa62.46■■■■■ 7.59
Snf8-202ENSMUST00000107700 NischQ80TM9 1593 aa61.3■■■■■ 7.4
Snf8-202ENSMUST00000107700 Abcc8B2RUS7 1588 aa59.49■■■■■ 7.11
Snf8-202ENSMUST00000107700 Abcc9P70170 1546 aa59.28■■■■■ 7.08
Snf8-202ENSMUST00000107700 ScribQ80U72 1612 aa57.89■■■■■ 6.86
Snf8-202ENSMUST00000107700 NacadQ5SWP3 1504 aa55.82■■■■■ 6.53
Snf8-202ENSMUST00000107700 Kdm5dQ62240 1548 aa55.76■■■■■ 6.52
Snf8-202ENSMUST00000107700 Sycp2Q9CUU3 1500 aa54.8■■■■■ 6.36
Snf8-202ENSMUST00000107700 Dcaf1Q80TR8 1506 aa54.54■■■■■ 6.32
Snf8-202ENSMUST00000107700 BicraF8VPZ9 1578 aa54.24■■■■■ 6.27
Snf8-202ENSMUST00000107700 Dnajc5bQ9CQ94 199 aa53.81■■■■■ 6.2
Snf8-202ENSMUST00000107700 Rb1cc1Q9ESK9 1588 aa53.4■■■■■ 6.14
Snf8-202ENSMUST00000107700 Pds5bQ4VA53 1446 aaKnown RBP52.72■■■■■ 6.03
Snf8-202ENSMUST00000107700 Thoc2B1AZI6 1594 aaKnown RBP52.68■■■■■ 6.02
Snf8-202ENSMUST00000107700 Baz1aO88379 1555 aa52.55■■■■■ 6
Snf8-202ENSMUST00000107700 Ccdc180J3QNE4 1664 aa52.36■■■■■ 5.97
Snf8-202ENSMUST00000107700 Crybg2B7ZCC2 1516 aa52.35■■■■■ 5.97
Snf8-202ENSMUST00000107700 Rhox8Q6VSS7 320 aa52.2■■■■■ 5.95
Snf8-202ENSMUST00000107700 Atad2bE9Q166 1460 aaKnown RBP52.1■■■■■ 5.93
Snf8-202ENSMUST00000107700 Zcchc6Q5BLK4 1491 aaKnown RBP51.93■■■■■ 5.9
Snf8-202ENSMUST00000107700 Cc2d2aQ8CFW7 1633 aa51.78■■■■■ 5.88
Snf8-202ENSMUST00000107700 Ercc6F8VPZ5 1481 aa51.62■■■■■ 5.85
Snf8-202ENSMUST00000107700 Smarca2Q6DIC0 1577 aa51.49■■■■■ 5.83
Snf8-202ENSMUST00000107700 Smarca4Q3TKT4 1613 aaKnown RBP51.45■■■■■ 5.83
Snf8-202ENSMUST00000107700 Fam135aQ6NS59 1506 aa51.3■■■■■ 5.8
Snf8-202ENSMUST00000107700 Iqgap2Q3UQ44 1575 aa51.29■■■■■ 5.8
Snf8-202ENSMUST00000107700 Cecr2E9Q2Z1 1453 aa51.16■■■■■ 5.78
Snf8-202ENSMUST00000107700 Wdr62Q3U3T8 1523 aa50.96■■■■■ 5.75
Snf8-202ENSMUST00000107700 Frmpd1A2AKB4 1549 aa50.89■■■■■ 5.74
Snf8-202ENSMUST00000107700 Phldb1Q6PDH0 1371 aaKnown RBP50.69■■■■■ 5.71
Snf8-202ENSMUST00000107700 Baz1bQ9Z277 1479 aa50.52■■■■■ 5.68
Snf8-202ENSMUST00000107700 Unc13aQ4KUS2 1712 aa50.26■■■■■ 5.64
Snf8-202ENSMUST00000107700 Ubl4bQ9CQ84 188 aa50.24■■■■■ 5.63
Snf8-202ENSMUST00000107700 Mrc2Q64449 1479 aa50.07■■■■■ 5.61
Snf8-202ENSMUST00000107700 CftrP26361 1476 aa49.8■■■■■ 5.56
Snf8-202ENSMUST00000107700 Cttnbp2B9EJA2 1648 aa49.77■■■■■ 5.56
Snf8-202ENSMUST00000107700 Synj1Q8CHC4 1574 aa49.67■■■■■ 5.54
Snf8-202ENSMUST00000107700 Rtl1Q7M732 1744 aa49.51■■■■■ 5.52
Snf8-202ENSMUST00000107700 Brd4Q9ESU6 1400 aaKnown RBP49.39■■■■■ 5.5
Snf8-202ENSMUST00000107700 Dnajc5P60904 198 aa49.26■■■■■ 5.48
Snf8-202ENSMUST00000107700 Trim41Q5NCC3 630 aa49.2■■■■■ 5.47
Snf8-202ENSMUST00000107700 Lrriq1Q0P5X1 1673 aa49.1■■■■■ 5.45
Snf8-202ENSMUST00000107700 Ccdc136Q3TVA9 1136 aa49.02■■■■■ 5.44
Snf8-202ENSMUST00000107700 Cux2P70298 1426 aa48.93■■■■■ 5.42
Snf8-202ENSMUST00000107700 Kif21aQ9QXL2 1672 aa48.81■■■■■ 5.4
Snf8-202ENSMUST00000107700 Kif15Q6P9L6 1387 aa48.8■■■■■ 5.4
Snf8-202ENSMUST00000107700 Rsf1E9PWW9 1441 aaKnown RBP48.8■■■■■ 5.4
Snf8-202ENSMUST00000107700 Esf1Q3V1V3 845 aaKnown RBP48.77■■■■■ 5.4
Snf8-202ENSMUST00000107700 Lamc3Q9R0B6 1581 aa48.51■■■■■ 5.36
Snf8-202ENSMUST00000107700 Eif4g3Q80XI3 1579 aaKnown RBP48.36■■■■■ 5.33
Snf8-202ENSMUST00000107700 Npm1Q61937 292 aaKnown RBP48.26■■■■■ 5.32
Snf8-202ENSMUST00000107700 Shroom2A2ALU4 1481 aa48.12■■■■■ 5.29
Snf8-202ENSMUST00000107700 Cep164Q5DU05 1446 aa48.1■■■■■ 5.29
Snf8-202ENSMUST00000107700 Urb2E9Q7L1 1524 aaKnown RBP47.98■■■■■ 5.27
Snf8-202ENSMUST00000107700 Dhx29Q6PGC1 1365 aaKnown RBP47.86■■■■■ 5.25
Snf8-202ENSMUST00000107700 Plb1Q3TTY0 1478 aa47.85■■■■■ 5.25
Snf8-202ENSMUST00000107700 TnnQ80Z71 1560 aa47.79■■■■■ 5.24
Snf8-202ENSMUST00000107700 Ccdc18Q640L5 1455 aa47.72■■■■■ 5.23
Snf8-202ENSMUST00000107700 Il27Q8K3I6 234 aa47.71■■■■■ 5.23
Snf8-202ENSMUST00000107700 Crocc2F6XLV1 1638 aa47.64■■■■■ 5.22
Snf8-202ENSMUST00000107700 LrpprcQ6PB66 1392 aaKnown RBP47.62■■■■■ 5.21
Snf8-202ENSMUST00000107700 Col17a1Q07563 1470 aa47.62■■■■■ 5.21
Snf8-202ENSMUST00000107700 Camsap1A2AHC3 1581 aa47.59■■■■■ 5.21
Snf8-202ENSMUST00000107700 Top2bQ64511 1612 aa47.56■■■■■ 5.2
Snf8-202ENSMUST00000107700 Golga3P55937 1487 aa47.45■■■■■ 5.19
Snf8-202ENSMUST00000107700 Pabpn1Q8CCS6 302 aaKnown RBP47.44■■■■■ 5.18
Snf8-202ENSMUST00000107700 Rusc2Q80U22 1514 aa47.39■■■■■ 5.18
Snf8-202ENSMUST00000107700 Ift140E9PY46 1464 aa47.33■■■■■ 5.17
Snf8-202ENSMUST00000107700 PogzQ8BZH4 1409 aaKnown RBP47.31■■■■■ 5.16
Snf8-202ENSMUST00000107700 Cngb1E1AZ71 1325 aa47.26■■■■■ 5.16
Snf8-202ENSMUST00000107700 Pelp1Q9DBD5 1123 aaKnown RBP47.14■■■■■ 5.14
Snf8-202ENSMUST00000107700 Duox2A2AQ99 1517 aa47.08■■■■■ 5.13
Snf8-202ENSMUST00000107700 Fmn1Q05860 1466 aa47.05■■■■■ 5.12
Snf8-202ENSMUST00000107700 Disp1Q3TDN0 1521 aa46.95■■■■■ 5.11
Snf8-202ENSMUST00000107700 Zcchc11B2RX14 1644 aaKnown RBP46.93■■■■■ 5.1
Snf8-202ENSMUST00000107700 Grin2bQ01097 1482 aa46.85■■■■■ 5.09
Snf8-202ENSMUST00000107700 Setd1bQ8CFT2 1985 aa46.8■■■■■ 5.08
Snf8-202ENSMUST00000107700 Samd9lQ69Z37 1561 aa46.79■■■■■ 5.08
Snf8-202ENSMUST00000107700 Nup160Q9Z0W3 1402 aaKnown RBP46.75■■■■■ 5.07
Snf8-202ENSMUST00000107700 Pbrm1Q8BSQ9 1634 aaKnown RBP46.7■■■■■ 5.07
Snf8-202ENSMUST00000107700 Cc2d2bA0A286YDU8 1405 aa46.65■■■■■ 5.06
Snf8-202ENSMUST00000107700 Efcab5A0JP43 1406 aa46.49■■■■■ 5.03
Snf8-202ENSMUST00000107700 Rad54l2Q99NG0 1466 aa46.45■■■■■ 5.03
Snf8-202ENSMUST00000107700 Adgrl3Q80TS3 1537 aa46.39■■■■■ 5.02
Snf8-202ENSMUST00000107700 Grin2aP35436 1464 aa46.36■■■■■ 5.01
Snf8-202ENSMUST00000107700 Magi3Q9EQJ9 1476 aa46.36■■■■■ 5.01
Snf8-202ENSMUST00000107700 AqrQ8CFQ3 1481 aaKnown RBP46.35■■■■■ 5.01
Snf8-202ENSMUST00000107700 Cep170Q6A065 1588 aa46.28■■■■■ 5
Snf8-202ENSMUST00000107700 Fgd6Q69ZL1 1399 aa46.28■■■■■ 5
Snf8-202ENSMUST00000107700 PtprkP35822 1457 aa46.26■■■■■ 5
Snf8-202ENSMUST00000107700 Arhgef5E9Q7D5 1581 aa46.26■■■■■ 5
Snf8-202ENSMUST00000107700 Gapvd1Q6PAR5 1458 aa46.21■■■■■ 4.99
Snf8-202ENSMUST00000107700 Pcdh10E9PXQ7 1057 aa46.21■■■■■ 4.99
Snf8-202ENSMUST00000107700 NrkQ9R0G8 1455 aa46.09■■■■■ 4.97
Snf8-202ENSMUST00000107700 Gm156Q58A37 223 aa46.09■■■■■ 4.97
Snf8-202ENSMUST00000107700 Ccdc88bQ4QRL3 1481 aa46.08■■■■■ 4.97
Snf8-202ENSMUST00000107700 Ttbk1Q6PCN3 1308 aa46.06■■■■■ 4.96
Snf8-202ENSMUST00000107700 Top2aQ01320 1528 aaKnown RBP46.04■■■■■ 4.96
Snf8-202ENSMUST00000107700 Pla2r1Q62028 1487 aa46.01■■■■■ 4.96
Snf8-202ENSMUST00000107700 PtprtQ99M80 1454 aa46■■■■■ 4.95
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms