RNA–Protein interactions for RNA: ENSMUST00000103573.2

Trav6-2-201, Transcript of T cell receptor alpha variable 6-2 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav6-2, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2-201ENSMUST00000103573 Gm35339A0A140LHH9 1649 aa16.77■□□□□ 0.27
Trav6-2-201ENSMUST00000103573 Mapk8ip2Q9ERE9 830 aa16.43■□□□□ 0.22
Trav6-2-201ENSMUST00000103573 NischQ80TM9 1593 aa16.39■□□□□ 0.21
Trav6-2-201ENSMUST00000103573 Chic1Q8CBW7 227 aa16.38■□□□□ 0.21
Trav6-2-201ENSMUST00000103573 Abcc8B2RUS7 1588 aa15.9■□□□□ 0.14
Trav6-2-201ENSMUST00000103573 Abcc9P70170 1546 aa15.89■□□□□ 0.13
Trav6-2-201ENSMUST00000103573 ScribQ80U72 1612 aa15.55■□□□□ 0.08
Trav6-2-201ENSMUST00000103573 NacadQ5SWP3 1504 aa14.98□□□□□ -0.01
Trav6-2-201ENSMUST00000103573 Kdm5dQ62240 1548 aa14.95□□□□□ -0.02
Trav6-2-201ENSMUST00000103573 Phf23Q8BSN5 401 aa14.7□□□□□ -0.06
Trav6-2-201ENSMUST00000103573 Sycp2Q9CUU3 1500 aa14.7□□□□□ -0.06
Trav6-2-201ENSMUST00000103573 Dcaf1Q80TR8 1506 aa14.57□□□□□ -0.08
Trav6-2-201ENSMUST00000103573 BicraF8VPZ9 1578 aa14.57□□□□□ -0.08
Trav6-2-201ENSMUST00000103573 Dnajc5bQ9CQ94 199 aa14.54□□□□□ -0.08
Trav6-2-201ENSMUST00000103573 Rb1cc1Q9ESK9 1588 aa14.3□□□□□ -0.12
Trav6-2-201ENSMUST00000103573 Thoc2B1AZI6 1594 aaKnown RBP14.22□□□□□ -0.13
Trav6-2-201ENSMUST00000103573 Pds5bQ4VA53 1446 aaKnown RBP14.19□□□□□ -0.14
Trav6-2-201ENSMUST00000103573 Ccdc180J3QNE4 1664 aa14.06□□□□□ -0.16
Trav6-2-201ENSMUST00000103573 Baz1aO88379 1555 aa14.04□□□□□ -0.16
Trav6-2-201ENSMUST00000103573 Cc2d2aQ8CFW7 1633 aa14.01□□□□□ -0.17
Trav6-2-201ENSMUST00000103573 Atad2bE9Q166 1460 aaKnown RBP13.99□□□□□ -0.17
Trav6-2-201ENSMUST00000103573 Crybg2B7ZCC2 1516 aa13.98□□□□□ -0.17
Trav6-2-201ENSMUST00000103573 Ercc6F8VPZ5 1481 aa13.93□□□□□ -0.18
Trav6-2-201ENSMUST00000103573 Gab3Q8BSM5 595 aa13.92□□□□□ -0.18
Trav6-2-201ENSMUST00000103573 Zcchc6Q5BLK4 1491 aaKnown RBP13.89□□□□□ -0.19
Trav6-2-201ENSMUST00000103573 Rhox8Q6VSS7 320 aa13.88□□□□□ -0.19
Trav6-2-201ENSMUST00000103573 Smarca2Q6DIC0 1577 aa13.84□□□□□ -0.19
Trav6-2-201ENSMUST00000103573 Fam135aQ6NS59 1506 aa13.83□□□□□ -0.2
Trav6-2-201ENSMUST00000103573 Smarca4Q3TKT4 1613 aaKnown RBP13.82□□□□□ -0.2
Trav6-2-201ENSMUST00000103573 Plppr3Q7TPB0 716 aa13.81□□□□□ -0.2
Trav6-2-201ENSMUST00000103573 Iqgap2Q3UQ44 1575 aa13.79□□□□□ -0.2
Trav6-2-201ENSMUST00000103573 Wdr62Q3U3T8 1523 aa13.69□□□□□ -0.22
Trav6-2-201ENSMUST00000103573 Frmpd1A2AKB4 1549 aa13.65□□□□□ -0.22
Trav6-2-201ENSMUST00000103573 Cecr2E9Q2Z1 1453 aa13.64□□□□□ -0.23
Trav6-2-201ENSMUST00000103573 Baz1bQ9Z277 1479 aa13.63□□□□□ -0.23
Trav6-2-201ENSMUST00000103573 Phldb1Q6PDH0 1371 aaKnown RBP13.63□□□□□ -0.23
Trav6-2-201ENSMUST00000103573 Unc13aQ4KUS2 1712 aa13.59□□□□□ -0.23
Trav6-2-201ENSMUST00000103573 Ubl4bQ9CQ84 188 aa13.53□□□□□ -0.24
Trav6-2-201ENSMUST00000103573 Mrc2Q64449 1479 aa13.5□□□□□ -0.25
Trav6-2-201ENSMUST00000103573 Dnajc5P60904 198 aa13.45□□□□□ -0.26
Trav6-2-201ENSMUST00000103573 Trim41Q5NCC3 630 aa13.4□□□□□ -0.26
Trav6-2-201ENSMUST00000103573 Cttnbp2B9EJA2 1648 aa13.35□□□□□ -0.27
Trav6-2-201ENSMUST00000103573 Rtl1Q7M732 1744 aa13.32□□□□□ -0.28
Trav6-2-201ENSMUST00000103573 Senp3Q9EP97 568 aaKnown RBP13.31□□□□□ -0.28
Trav6-2-201ENSMUST00000103573 Lrriq1Q0P5X1 1673 aa13.3□□□□□ -0.28
Trav6-2-201ENSMUST00000103573 CftrP26361 1476 aa13.28□□□□□ -0.28
Trav6-2-201ENSMUST00000103573 Synj1Q8CHC4 1574 aa13.27□□□□□ -0.29
Trav6-2-201ENSMUST00000103573 Kif21aQ9QXL2 1672 aa13.18□□□□□ -0.3
Trav6-2-201ENSMUST00000103573 Brd4Q9ESU6 1400 aaKnown RBP13.18□□□□□ -0.3
Trav6-2-201ENSMUST00000103573 Rsf1E9PWW9 1441 aaKnown RBP13.16□□□□□ -0.3
Trav6-2-201ENSMUST00000103573 Cux2P70298 1426 aa13.13□□□□□ -0.31
Trav6-2-201ENSMUST00000103573 Eif4g3Q80XI3 1579 aaKnown RBP13.09□□□□□ -0.31
Trav6-2-201ENSMUST00000103573 Kif15Q6P9L6 1387 aa13.07□□□□□ -0.32
Trav6-2-201ENSMUST00000103573 Esf1Q3V1V3 845 aaKnown RBP13.07□□□□□ -0.32
Trav6-2-201ENSMUST00000103573 Shroom2A2ALU4 1481 aa13.04□□□□□ -0.32
Trav6-2-201ENSMUST00000103573 Ccdc136Q3TVA9 1136 aa13.03□□□□□ -0.32
Trav6-2-201ENSMUST00000103573 Lamc3Q9R0B6 1581 aa12.98□□□□□ -0.33
Trav6-2-201ENSMUST00000103573 Npm1Q61937 292 aaKnown RBP12.97□□□□□ -0.33
Trav6-2-201ENSMUST00000103573 Cep164Q5DU05 1446 aa12.92□□□□□ -0.34
Trav6-2-201ENSMUST00000103573 Col17a1Q07563 1470 aa12.91□□□□□ -0.34
Trav6-2-201ENSMUST00000103573 Top2bQ64511 1612 aa12.9□□□□□ -0.34
Trav6-2-201ENSMUST00000103573 Urb2E9Q7L1 1524 aaKnown RBP12.89□□□□□ -0.35
Trav6-2-201ENSMUST00000103573 Pabpn1Q8CCS6 302 aaKnown RBP12.84□□□□□ -0.35
Trav6-2-201ENSMUST00000103573 Plb1Q3TTY0 1478 aa12.84□□□□□ -0.35
Trav6-2-201ENSMUST00000103573 Crocc2F6XLV1 1638 aa12.83□□□□□ -0.36
Trav6-2-201ENSMUST00000103573 Dhx29Q6PGC1 1365 aaKnown RBP12.82□□□□□ -0.36
Trav6-2-201ENSMUST00000103573 Ccdc18Q640L5 1455 aa12.81□□□□□ -0.36
Trav6-2-201ENSMUST00000103573 Il27Q8K3I6 234 aa12.79□□□□□ -0.36
Trav6-2-201ENSMUST00000103573 Pelp1Q9DBD5 1123 aaKnown RBP12.78□□□□□ -0.36
Trav6-2-201ENSMUST00000103573 Rusc2Q80U22 1514 aa12.78□□□□□ -0.36
Trav6-2-201ENSMUST00000103573 TnnQ80Z71 1560 aa12.77□□□□□ -0.37
Trav6-2-201ENSMUST00000103573 Camsap1A2AHC3 1581 aa12.75□□□□□ -0.37
Trav6-2-201ENSMUST00000103573 Zcchc11B2RX14 1644 aaKnown RBP12.74□□□□□ -0.37
Trav6-2-201ENSMUST00000103573 LrpprcQ6PB66 1392 aaKnown RBP12.74□□□□□ -0.37
Trav6-2-201ENSMUST00000103573 Ift140E9PY46 1464 aa12.72□□□□□ -0.37
Trav6-2-201ENSMUST00000103573 Setd1bQ8CFT2 1985 aa12.69□□□□□ -0.38
Trav6-2-201ENSMUST00000103573 PogzQ8BZH4 1409 aaKnown RBP12.64□□□□□ -0.39
Trav6-2-201ENSMUST00000103573 Pbrm1Q8BSQ9 1634 aaKnown RBP12.61□□□□□ -0.39
Trav6-2-201ENSMUST00000103573 Golga3P55937 1487 aa12.6□□□□□ -0.39
Trav6-2-201ENSMUST00000103573 Duox2A2AQ99 1517 aa12.6□□□□□ -0.39
Trav6-2-201ENSMUST00000103573 Cngb1E1AZ71 1325 aa12.6□□□□□ -0.39
Trav6-2-201ENSMUST00000103573 Arhgef5E9Q7D5 1581 aa12.58□□□□□ -0.4
Trav6-2-201ENSMUST00000103573 Disp1Q3TDN0 1521 aa12.57□□□□□ -0.4
Trav6-2-201ENSMUST00000103573 Adgrl3Q80TS3 1537 aa12.54□□□□□ -0.4
Trav6-2-201ENSMUST00000103573 Samd9lQ69Z37 1561 aa12.54□□□□□ -0.4
Trav6-2-201ENSMUST00000103573 Fmn1Q05860 1466 aa12.53□□□□□ -0.4
Trav6-2-201ENSMUST00000103573 Pcdh10E9PXQ7 1057 aa12.53□□□□□ -0.4
Trav6-2-201ENSMUST00000103573 Ttbk1Q6PCN3 1308 aa12.53□□□□□ -0.4
Trav6-2-201ENSMUST00000103573 Cc2d2bA0A286YDU8 1405 aa12.53□□□□□ -0.4
Trav6-2-201ENSMUST00000103573 Nup160Q9Z0W3 1402 aaKnown RBP12.52□□□□□ -0.41
Trav6-2-201ENSMUST00000103573 Cep170Q6A065 1588 aa12.52□□□□□ -0.41
Trav6-2-201ENSMUST00000103573 Grin2bQ01097 1482 aa12.51□□□□□ -0.41
Trav6-2-201ENSMUST00000103573 PtprkP35822 1457 aa12.5□□□□□ -0.41
Trav6-2-201ENSMUST00000103573 Gapvd1Q6PAR5 1458 aa12.46□□□□□ -0.41
Trav6-2-201ENSMUST00000103573 Fgd6Q69ZL1 1399 aa12.44□□□□□ -0.42
Trav6-2-201ENSMUST00000103573 AqrQ8CFQ3 1481 aaKnown RBP12.44□□□□□ -0.42
Trav6-2-201ENSMUST00000103573 Grin2aP35436 1464 aa12.43□□□□□ -0.42
Trav6-2-201ENSMUST00000103573 PtprtQ99M80 1454 aa12.43□□□□□ -0.42
Trav6-2-201ENSMUST00000103573 Rad54l2Q99NG0 1466 aa12.42□□□□□ -0.42
Trav6-2-201ENSMUST00000103573 Gm156Q58A37 223 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms