RNA–Protein interactions for RNA: ENSMUST00000092041.9

Ss18-203, Transcript of Protein SSXT, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ss18, Length 2,997 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18-203ENSMUST00000092041 NischQ80TM9 1593 aa29.69■■■□□ 2.34
Ss18-203ENSMUST00000092041 Gm35339A0A140LHH9 1649 aa28.78■■■□□ 2.2
Ss18-203ENSMUST00000092041 Abcc9P70170 1546 aa28.63■■■□□ 2.17
Ss18-203ENSMUST00000092041 Abcc8B2RUS7 1588 aa28.17■■■□□ 2.1
Ss18-203ENSMUST00000092041 Rhox8Q6VSS7 320 aa28.05■■■□□ 2.08
Ss18-203ENSMUST00000092041 ScribQ80U72 1612 aa26.53■■□□□ 1.84
Ss18-203ENSMUST00000092041 Ccdc136Q3TVA9 1136 aa26.13■■□□□ 1.77
Ss18-203ENSMUST00000092041 Rb1cc1Q9ESK9 1588 aa26.03■■□□□ 1.76
Ss18-203ENSMUST00000092041 Kdm5dQ62240 1548 aa26.01■■□□□ 1.75
Ss18-203ENSMUST00000092041 Rtl1Q7M732 1744 aa25.98■■□□□ 1.75
Ss18-203ENSMUST00000092041 Dcaf1Q80TR8 1506 aa25.74■■□□□ 1.71
Ss18-203ENSMUST00000092041 Ccdc180J3QNE4 1664 aa25.71■■□□□ 1.71
Ss18-203ENSMUST00000092041 Zcchc6Q5BLK4 1491 aaKnown RBP25.65■■□□□ 1.7
Ss18-203ENSMUST00000092041 NacadQ5SWP3 1504 aa25.64■■□□□ 1.69
Ss18-203ENSMUST00000092041 Baz1aO88379 1555 aa25.54■■□□□ 1.68
Ss18-203ENSMUST00000092041 Ehmt2Q9Z148 1263 aaKnown RBP25.24■■□□□ 1.63
Ss18-203ENSMUST00000092041 Sycp2Q9CUU3 1500 aa25.13■■□□□ 1.61
Ss18-203ENSMUST00000092041 Trim41Q5NCC3 630 aa25.01■■□□□ 1.59
Ss18-203ENSMUST00000092041 Cngb1E1AZ71 1325 aa24.94■■□□□ 1.58
Ss18-203ENSMUST00000092041 Rpgrip1Q9EPQ2 1331 aa24.93■■□□□ 1.58
Ss18-203ENSMUST00000092041 Smarca2Q6DIC0 1577 aa24.92■■□□□ 1.58
Ss18-203ENSMUST00000092041 Cecr2E9Q2Z1 1453 aa24.85■■□□□ 1.57
Ss18-203ENSMUST00000092041 BicraF8VPZ9 1578 aa24.74■■□□□ 1.55
Ss18-203ENSMUST00000092041 HrcG5E8J6 738 aa24.72■■□□□ 1.55
Ss18-203ENSMUST00000092041 Crybg2B7ZCC2 1516 aa24.71■■□□□ 1.55
Ss18-203ENSMUST00000092041 Gab3Q8BSM5 595 aa24.67■■□□□ 1.54
Ss18-203ENSMUST00000092041 Esf1Q3V1V3 845 aaKnown RBP24.63■■□□□ 1.53
Ss18-203ENSMUST00000092041 Chic1Q8CBW7 227 aa24.59■■□□□ 1.53
Ss18-203ENSMUST00000092041 Synj1Q8CHC4 1574 aa24.42■■□□□ 1.5
Ss18-203ENSMUST00000092041 Brd4Q9ESU6 1400 aaKnown RBP24.4■■□□□ 1.5
Ss18-203ENSMUST00000092041 Rsf1E9PWW9 1441 aaKnown RBP24.34■■□□□ 1.49
Ss18-203ENSMUST00000092041 Ccdc88bQ4QRL3 1481 aa24.28■■□□□ 1.48
Ss18-203ENSMUST00000092041 CftrP26361 1476 aa24.2■■□□□ 1.46
Ss18-203ENSMUST00000092041 Cep164Q5DU05 1446 aa24.19■■□□□ 1.46
Ss18-203ENSMUST00000092041 Golga3P55937 1487 aa24.14■■□□□ 1.45
Ss18-203ENSMUST00000092041 Smarca4Q3TKT4 1613 aaKnown RBP24■■□□□ 1.43
Ss18-203ENSMUST00000092041 Acin1Q9JIX8 1338 aaKnown RBP23.96■■□□□ 1.43
Ss18-203ENSMUST00000092041 Cttnbp2B9EJA2 1648 aa23.89■■□□□ 1.42
Ss18-203ENSMUST00000092041 Pcgf6Q99NA9 353 aa23.87■■□□□ 1.41
Ss18-203ENSMUST00000092041 Cc2d2aQ8CFW7 1633 aa23.84■■□□□ 1.41
Ss18-203ENSMUST00000092041 Myt1lP97500 1187 aa23.81■■□□□ 1.4
Ss18-203ENSMUST00000092041 Iqgap2Q3UQ44 1575 aa23.81■■□□□ 1.4
Ss18-203ENSMUST00000092041 Il27Q8K3I6 234 aa23.78■■□□□ 1.4
Ss18-203ENSMUST00000092041 Top2bQ64511 1612 aa23.71■■□□□ 1.39
Ss18-203ENSMUST00000092041 Atad2bE9Q166 1460 aaKnown RBP23.64■■□□□ 1.38
Ss18-203ENSMUST00000092041 Npm2Q80W85 207 aa23.63■■□□□ 1.37
Ss18-203ENSMUST00000092041 Pds5bQ4VA53 1446 aaKnown RBP23.56■■□□□ 1.36
Ss18-203ENSMUST00000092041 UbtfP25976 765 aaKnown RBP23.44■■□□□ 1.34
Ss18-203ENSMUST00000092041 Fmn1Q05860 1466 aa23.44■■□□□ 1.34
Ss18-203ENSMUST00000092041 Frmpd1A2AKB4 1549 aa23.44■■□□□ 1.34
Ss18-203ENSMUST00000092041 Rapgef2Q8CHG7 1496 aa23.36■■□□□ 1.33
Ss18-203ENSMUST00000092041 Kif15Q6P9L6 1387 aa23.34■■□□□ 1.33
Ss18-203ENSMUST00000092041 Mier1Q5UAK0 511 aa23.31■■□□□ 1.32
Ss18-203ENSMUST00000092041 Top2aQ01320 1528 aaKnown RBP23.3■■□□□ 1.32
Ss18-203ENSMUST00000092041 Ap3b1Q9Z1T1 1105 aa23.3■■□□□ 1.32
Ss18-203ENSMUST00000092041 Wdr62Q3U3T8 1523 aa23.28■■□□□ 1.32
Ss18-203ENSMUST00000092041 Ercc6F8VPZ5 1481 aa23.27■■□□□ 1.32
Ss18-203ENSMUST00000092041 Zeb1Q64318 1117 aa23.27■■□□□ 1.32
Ss18-203ENSMUST00000092041 Plekhg3Q4VAC9 1341 aa23.25■■□□□ 1.31
Ss18-203ENSMUST00000092041 Cep162Q6ZQ06 1403 aa23.21■■□□□ 1.31
Ss18-203ENSMUST00000092041 Ubl4bQ9CQ84 188 aa23.17■■□□□ 1.3
Ss18-203ENSMUST00000092041 PtprkP35822 1457 aa23.16■■□□□ 1.3
Ss18-203ENSMUST00000092041 Neurod1Q60867 357 aa23.13■■□□□ 1.29
Ss18-203ENSMUST00000092041 Las1lA2BE28 776 aaKnown RBP23.1■■□□□ 1.29
Ss18-203ENSMUST00000092041 Unc13aQ4KUS2 1712 aa23.08■■□□□ 1.29
Ss18-203ENSMUST00000092041 Dnajc5bQ9CQ94 199 aa23.05■■□□□ 1.28
Ss18-203ENSMUST00000092041 Supt5hO55201 1082 aaKnown RBP23.04■■□□□ 1.28
Ss18-203ENSMUST00000092041 Clip1Q922J3 1391 aa23■■□□□ 1.27
Ss18-203ENSMUST00000092041 TnnQ80Z71 1560 aa22.97■■□□□ 1.27
Ss18-203ENSMUST00000092041 Npm1Q61937 292 aaKnown RBP22.97■■□□□ 1.27
Ss18-203ENSMUST00000092041 Cux2P70298 1426 aa22.94■■□□□ 1.26
Ss18-203ENSMUST00000092041 Lamc3Q9R0B6 1581 aa22.93■■□□□ 1.26
Ss18-203ENSMUST00000092041 Phldb1Q6PDH0 1371 aaKnown RBP22.89■■□□□ 1.25
Ss18-203ENSMUST00000092041 Arhgap35Q91YM2 1499 aa22.88■■□□□ 1.25
Ss18-203ENSMUST00000092041 Camsap1A2AHC3 1581 aa22.87■■□□□ 1.25
Ss18-203ENSMUST00000092041 Ppargc1bQ8VHJ7 1014 aa22.84■■□□□ 1.25
Ss18-203ENSMUST00000092041 Ccdc18Q640L5 1455 aa22.82■■□□□ 1.24
Ss18-203ENSMUST00000092041 Thoc2B1AZI6 1594 aaKnown RBP22.81■■□□□ 1.24
Ss18-203ENSMUST00000092041 Lmod2Q3UHZ5 550 aa22.8■■□□□ 1.24
Ss18-203ENSMUST00000092041 CenpbP27790 599 aa22.77■■□□□ 1.24
Ss18-203ENSMUST00000092041 Myt1Q8CFC2 1127 aa22.77■■□□□ 1.23
Ss18-203ENSMUST00000092041 Baz1bQ9Z277 1479 aa22.74■■□□□ 1.23
Ss18-203ENSMUST00000092041 Shroom4Q1W617 1475 aa22.74■■□□□ 1.23
Ss18-203ENSMUST00000092041 Grin2bQ01097 1482 aa22.73■■□□□ 1.23
Ss18-203ENSMUST00000092041 Setd5Q5XJV7 1441 aa22.73■■□□□ 1.23
Ss18-203ENSMUST00000092041 1700123L14RikQ3V2K7 440 aa22.72■■□□□ 1.23
Ss18-203ENSMUST00000092041 Eif4g1Q6NZJ6 1600 aaKnown RBP22.71■■□□□ 1.23
Ss18-203ENSMUST00000092041 NrkQ9R0G8 1455 aa22.67■■□□□ 1.22
Ss18-203ENSMUST00000092041 NefmP08553 848 aa22.67■■□□□ 1.22
Ss18-203ENSMUST00000092041 Arap1Q4LDD4 1452 aa22.66■■□□□ 1.22
Ss18-203ENSMUST00000092041 Eid3Q3V124 375 aa22.62■■□□□ 1.21
Ss18-203ENSMUST00000092041 Eea1Q8BL66 1411 aa22.61■■□□□ 1.21
Ss18-203ENSMUST00000092041 LrpprcQ6PB66 1392 aaKnown RBP22.6■■□□□ 1.21
Ss18-203ENSMUST00000092041 DiexfQ8BTT6 772 aaKnown RBP22.6■■□□□ 1.21
Ss18-203ENSMUST00000092041 Wdr66E9Q743 1299 aa22.58■■□□□ 1.21
Ss18-203ENSMUST00000092041 Rad54l2Q99NG0 1466 aa22.54■■□□□ 1.2
Ss18-203ENSMUST00000092041 Dhx29Q6PGC1 1365 aaKnown RBP22.54■■□□□ 1.2
Ss18-203ENSMUST00000092041 AqrQ8CFQ3 1481 aaKnown RBP22.53■■□□□ 1.2
Ss18-203ENSMUST00000092041 Duox2A2AQ99 1517 aa22.53■■□□□ 1.2
Ss18-203ENSMUST00000092041 Mroh2bQ7M6Y6 1581 aa22.52■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms