RNA–Protein interactions for RNA: ENSMUST00000091641.12

Snrnp48-201, Transcript of U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp48, Length 1,785 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48-201ENSMUST00000091641 Gm35339A0A140LHH9 1649 aa36.79■■■■□ 3.48
Snrnp48-201ENSMUST00000091641 NischQ80TM9 1593 aa36.63■■■■□ 3.45
Snrnp48-201ENSMUST00000091641 Abcc9P70170 1546 aa35.56■■■■□ 3.28
Snrnp48-201ENSMUST00000091641 Abcc8B2RUS7 1588 aa35.16■■■■□ 3.22
Snrnp48-201ENSMUST00000091641 ScribQ80U72 1612 aa33.34■■■□□ 2.93
Snrnp48-201ENSMUST00000091641 Dcaf1Q80TR8 1506 aa32.75■■■□□ 2.83
Snrnp48-201ENSMUST00000091641 NacadQ5SWP3 1504 aa32.48■■■□□ 2.79
Snrnp48-201ENSMUST00000091641 Kdm5dQ62240 1548 aa32.46■■■□□ 2.79
Snrnp48-201ENSMUST00000091641 Rhox8Q6VSS7 320 aa32.4■■■□□ 2.78
Snrnp48-201ENSMUST00000091641 Rb1cc1Q9ESK9 1588 aa32■■■□□ 2.71
Snrnp48-201ENSMUST00000091641 Ccdc180J3QNE4 1664 aa31.88■■■□□ 2.69
Snrnp48-201ENSMUST00000091641 Sycp2Q9CUU3 1500 aa31.78■■■□□ 2.68
Snrnp48-201ENSMUST00000091641 Baz1aO88379 1555 aa31.65■■■□□ 2.66
Snrnp48-201ENSMUST00000091641 Crybg2B7ZCC2 1516 aa31.48■■■□□ 2.63
Snrnp48-201ENSMUST00000091641 Rtl1Q7M732 1744 aa31.26■■■□□ 2.59
Snrnp48-201ENSMUST00000091641 BicraF8VPZ9 1578 aa31.14■■■□□ 2.58
Snrnp48-201ENSMUST00000091641 Zcchc6Q5BLK4 1491 aaKnown RBP30.94■■■□□ 2.54
Snrnp48-201ENSMUST00000091641 Smarca2Q6DIC0 1577 aa30.81■■■□□ 2.52
Snrnp48-201ENSMUST00000091641 Cecr2E9Q2Z1 1453 aa30.23■■■□□ 2.43
Snrnp48-201ENSMUST00000091641 Pds5bQ4VA53 1446 aaKnown RBP30.16■■■□□ 2.42
Snrnp48-201ENSMUST00000091641 Smarca4Q3TKT4 1613 aaKnown RBP30.15■■■□□ 2.42
Snrnp48-201ENSMUST00000091641 Ccdc136Q3TVA9 1136 aa30.15■■■□□ 2.42
Snrnp48-201ENSMUST00000091641 Atad2bE9Q166 1460 aaKnown RBP30.05■■■□□ 2.4
Snrnp48-201ENSMUST00000091641 Brd4Q9ESU6 1400 aaKnown RBP30.03■■■□□ 2.4
Snrnp48-201ENSMUST00000091641 Trim41Q5NCC3 630 aa29.89■■■□□ 2.38
Snrnp48-201ENSMUST00000091641 Iqgap2Q3UQ44 1575 aa29.84■■■□□ 2.37
Snrnp48-201ENSMUST00000091641 CftrP26361 1476 aa29.8■■■□□ 2.36
Snrnp48-201ENSMUST00000091641 Synj1Q8CHC4 1574 aa29.79■■■□□ 2.36
Snrnp48-201ENSMUST00000091641 Cttnbp2B9EJA2 1648 aa29.78■■■□□ 2.36
Snrnp48-201ENSMUST00000091641 Thoc2B1AZI6 1594 aaKnown RBP29.55■■■□□ 2.32
Snrnp48-201ENSMUST00000091641 Ercc6F8VPZ5 1481 aa29.54■■■□□ 2.32
Snrnp48-201ENSMUST00000091641 Wdr62Q3U3T8 1523 aa29.46■■■□□ 2.31
Snrnp48-201ENSMUST00000091641 Frmpd1A2AKB4 1549 aa29.38■■■□□ 2.29
Snrnp48-201ENSMUST00000091641 Esf1Q3V1V3 845 aaKnown RBP29.26■■■□□ 2.27
Snrnp48-201ENSMUST00000091641 Golga3P55937 1487 aa29.25■■■□□ 2.27
Snrnp48-201ENSMUST00000091641 Top2bQ64511 1612 aa29.12■■■□□ 2.25
Snrnp48-201ENSMUST00000091641 Fam135aQ6NS59 1506 aa29.08■■■□□ 2.25
Snrnp48-201ENSMUST00000091641 Cc2d2aQ8CFW7 1633 aa29.08■■■□□ 2.25
Snrnp48-201ENSMUST00000091641 Dnajc5bQ9CQ94 199 aa29.06■■■□□ 2.24
Snrnp48-201ENSMUST00000091641 Phldb1Q6PDH0 1371 aaKnown RBP29.05■■■□□ 2.24
Snrnp48-201ENSMUST00000091641 HrcG5E8J6 738 aa29.02■■■□□ 2.24
Snrnp48-201ENSMUST00000091641 Unc13aQ4KUS2 1712 aa29■■■□□ 2.23
Snrnp48-201ENSMUST00000091641 Cngb1E1AZ71 1325 aa28.99■■■□□ 2.23
Snrnp48-201ENSMUST00000091641 Baz1bQ9Z277 1479 aa28.93■■■□□ 2.22
Snrnp48-201ENSMUST00000091641 Rsf1E9PWW9 1441 aaKnown RBP28.79■■■□□ 2.2
Snrnp48-201ENSMUST00000091641 Fmn1Q05860 1466 aa28.76■■■□□ 2.19
Snrnp48-201ENSMUST00000091641 Lamc3Q9R0B6 1581 aa28.75■■■□□ 2.19
Snrnp48-201ENSMUST00000091641 TnnQ80Z71 1560 aa28.7■■■□□ 2.19
Snrnp48-201ENSMUST00000091641 Ubl4bQ9CQ84 188 aa28.65■■■□□ 2.18
Snrnp48-201ENSMUST00000091641 Kif15Q6P9L6 1387 aa28.61■■■□□ 2.17
Snrnp48-201ENSMUST00000091641 Ccdc88bQ4QRL3 1481 aa28.61■■■□□ 2.17
Snrnp48-201ENSMUST00000091641 Cep164Q5DU05 1446 aa28.58■■■□□ 2.17
Snrnp48-201ENSMUST00000091641 Chic1Q8CBW7 227 aa28.45■■■□□ 2.15
Snrnp48-201ENSMUST00000091641 Cux2P70298 1426 aa28.41■■■□□ 2.14
Snrnp48-201ENSMUST00000091641 Mrc2Q64449 1479 aa28.39■■■□□ 2.14
Snrnp48-201ENSMUST00000091641 Top2aQ01320 1528 aaKnown RBP28.38■■■□□ 2.13
Snrnp48-201ENSMUST00000091641 Ccdc18Q640L5 1455 aa28.34■■■□□ 2.13
Snrnp48-201ENSMUST00000091641 Camsap1A2AHC3 1581 aa28.31■■■□□ 2.12
Snrnp48-201ENSMUST00000091641 Npm1Q61937 292 aaKnown RBP28.16■■■□□ 2.1
Snrnp48-201ENSMUST00000091641 Il27Q8K3I6 234 aa28.07■■■□□ 2.08
Snrnp48-201ENSMUST00000091641 Grin2bQ01097 1482 aa28.01■■■□□ 2.07
Snrnp48-201ENSMUST00000091641 LrpprcQ6PB66 1392 aaKnown RBP28.01■■■□□ 2.07
Snrnp48-201ENSMUST00000091641 NrkQ9R0G8 1455 aa27.98■■■□□ 2.07
Snrnp48-201ENSMUST00000091641 Kif21aQ9QXL2 1672 aa27.97■■■□□ 2.07
Snrnp48-201ENSMUST00000091641 PogzQ8BZH4 1409 aaKnown RBP27.92■■■□□ 2.06
Snrnp48-201ENSMUST00000091641 Rapgef2Q8CHG7 1496 aa27.88■■■□□ 2.05
Snrnp48-201ENSMUST00000091641 Gab3Q8BSM5 595 aa27.88■■■□□ 2.05
Snrnp48-201ENSMUST00000091641 Dhx29Q6PGC1 1365 aaKnown RBP27.88■■■□□ 2.05
Snrnp48-201ENSMUST00000091641 Shroom4Q1W617 1475 aa27.85■■■□□ 2.05
Snrnp48-201ENSMUST00000091641 Efcab5A0JP43 1406 aa27.83■■■□□ 2.05
Snrnp48-201ENSMUST00000091641 Duox2A2AQ99 1517 aa27.8■■■□□ 2.04
Snrnp48-201ENSMUST00000091641 Crocc2F6XLV1 1638 aa27.79■■■□□ 2.04
Snrnp48-201ENSMUST00000091641 PtprkP35822 1457 aa27.75■■■□□ 2.03
Snrnp48-201ENSMUST00000091641 Lrriq1Q0P5X1 1673 aa27.67■■■□□ 2.02
Snrnp48-201ENSMUST00000091641 Npm2Q80W85 207 aa27.67■■■□□ 2.02
Snrnp48-201ENSMUST00000091641 Cep162Q6ZQ06 1403 aa27.65■■■□□ 2.02
Snrnp48-201ENSMUST00000091641 Eif4g1Q6NZJ6 1600 aaKnown RBP27.63■■■□□ 2.01
Snrnp48-201ENSMUST00000091641 Urb2E9Q7L1 1524 aaKnown RBP27.58■■■□□ 2.01
Snrnp48-201ENSMUST00000091641 Plb1Q3TTY0 1478 aa27.58■■■□□ 2.01
Snrnp48-201ENSMUST00000091641 Samd9lQ69Z37 1561 aa27.57■■■□□ 2
Snrnp48-201ENSMUST00000091641 Map3k1P53349 1493 aa27.56■■■□□ 2
Snrnp48-201ENSMUST00000091641 Arhgap35Q91YM2 1499 aa27.53■■■□□ 2
Snrnp48-201ENSMUST00000091641 Mroh2bQ7M6Y6 1581 aa27.52■■■□□ 2
Snrnp48-201ENSMUST00000091641 Ift140E9PY46 1464 aa27.48■■□□□ 1.99
Snrnp48-201ENSMUST00000091641 SynmQ70IV5 1561 aa27.44■■□□□ 1.98
Snrnp48-201ENSMUST00000091641 AqrQ8CFQ3 1481 aaKnown RBP27.4■■□□□ 1.98
Snrnp48-201ENSMUST00000091641 Pbrm1Q8BSQ9 1634 aaKnown RBP27.39■■□□□ 1.97
Snrnp48-201ENSMUST00000091641 Zeb1Q64318 1117 aa27.38■■□□□ 1.97
Snrnp48-201ENSMUST00000091641 Disp1Q3TDN0 1521 aa27.37■■□□□ 1.97
Snrnp48-201ENSMUST00000091641 Eif4g3Q80XI3 1579 aaKnown RBP27.34■■□□□ 1.97
Snrnp48-201ENSMUST00000091641 Rad54l2Q99NG0 1466 aa27.33■■□□□ 1.97
Snrnp48-201ENSMUST00000091641 Carmil1Q6EDY6 1374 aa27.3■■□□□ 1.96
Snrnp48-201ENSMUST00000091641 Gpatch8A2A6A1 1505 aa27.3■■□□□ 1.96
Snrnp48-201ENSMUST00000091641 Clip1Q922J3 1391 aa27.29■■□□□ 1.96
Snrnp48-201ENSMUST00000091641 Magi3Q9EQJ9 1476 aa27.28■■□□□ 1.96
Snrnp48-201ENSMUST00000091641 Myt1lP97500 1187 aa27.27■■□□□ 1.96
Snrnp48-201ENSMUST00000091641 Grin2aP35436 1464 aa27.26■■□□□ 1.96
Snrnp48-201ENSMUST00000091641 Nup160Q9Z0W3 1402 aaKnown RBP27.26■■□□□ 1.95
Snrnp48-201ENSMUST00000091641 Pla2r1Q62028 1487 aa27.22■■□□□ 1.95
Snrnp48-201ENSMUST00000091641 Cc2d2bA0A286YDU8 1405 aa27.19■■□□□ 1.94
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms