RNA–Protein interactions for RNA: ENSMUST00000088169.5

Rtn3-203, Transcript of Reticulon-3, mousemouse

TSL 5 BASIC

Gene Rtn3, Length 1,709 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-203ENSMUST00000088169 NischQ80TM9 1593 aa28.33■■■□□ 2.13
Rtn3-203ENSMUST00000088169 Gm35339A0A140LHH9 1649 aa28.28■■■□□ 2.12
Rtn3-203ENSMUST00000088169 Abcc9P70170 1546 aa27.52■■■□□ 2
Rtn3-203ENSMUST00000088169 Abcc8B2RUS7 1588 aa27.11■■□□□ 1.93
Rtn3-203ENSMUST00000088169 ScribQ80U72 1612 aa25.49■■□□□ 1.67
Rtn3-203ENSMUST00000088169 Rhox8Q6VSS7 320 aa25.45■■□□□ 1.66
Rtn3-203ENSMUST00000088169 Dcaf1Q80TR8 1506 aa25.37■■□□□ 1.65
Rtn3-203ENSMUST00000088169 NacadQ5SWP3 1504 aa24.93■■□□□ 1.58
Rtn3-203ENSMUST00000088169 Kdm5dQ62240 1548 aa24.92■■□□□ 1.58
Rtn3-203ENSMUST00000088169 Rtl1Q7M732 1744 aa24.84■■□□□ 1.57
Rtn3-203ENSMUST00000088169 Rb1cc1Q9ESK9 1588 aa24.76■■□□□ 1.55
Rtn3-203ENSMUST00000088169 Ccdc180J3QNE4 1664 aa24.71■■□□□ 1.55
Rtn3-203ENSMUST00000088169 Baz1aO88379 1555 aa24.52■■□□□ 1.52
Rtn3-203ENSMUST00000088169 Crybg2B7ZCC2 1516 aa24.38■■□□□ 1.49
Rtn3-203ENSMUST00000088169 Sycp2Q9CUU3 1500 aa24.37■■□□□ 1.49
Rtn3-203ENSMUST00000088169 Zcchc6Q5BLK4 1491 aaKnown RBP23.97■■□□□ 1.43
Rtn3-203ENSMUST00000088169 Smarca2Q6DIC0 1577 aa23.9■■□□□ 1.42
Rtn3-203ENSMUST00000088169 BicraF8VPZ9 1578 aa23.8■■□□□ 1.4
Rtn3-203ENSMUST00000088169 Ccdc136Q3TVA9 1136 aa23.62■■□□□ 1.37
Rtn3-203ENSMUST00000088169 Trim41Q5NCC3 630 aa23.46■■□□□ 1.35
Rtn3-203ENSMUST00000088169 Cecr2E9Q2Z1 1453 aa23.36■■□□□ 1.33
Rtn3-203ENSMUST00000088169 Brd4Q9ESU6 1400 aaKnown RBP23.35■■□□□ 1.33
Rtn3-203ENSMUST00000088169 HrcG5E8J6 738 aa23.19■■□□□ 1.3
Rtn3-203ENSMUST00000088169 Smarca4Q3TKT4 1613 aaKnown RBP23.17■■□□□ 1.3
Rtn3-203ENSMUST00000088169 Synj1Q8CHC4 1574 aa23.08■■□□□ 1.28
Rtn3-203ENSMUST00000088169 CftrP26361 1476 aa23.08■■□□□ 1.28
Rtn3-203ENSMUST00000088169 Pds5bQ4VA53 1446 aaKnown RBP23.05■■□□□ 1.28
Rtn3-203ENSMUST00000088169 Atad2bE9Q166 1460 aaKnown RBP23.02■■□□□ 1.28
Rtn3-203ENSMUST00000088169 Cttnbp2B9EJA2 1648 aa23.02■■□□□ 1.28
Rtn3-203ENSMUST00000088169 Iqgap2Q3UQ44 1575 aa22.89■■□□□ 1.26
Rtn3-203ENSMUST00000088169 Golga3P55937 1487 aa22.85■■□□□ 1.25
Rtn3-203ENSMUST00000088169 Esf1Q3V1V3 845 aaKnown RBP22.74■■□□□ 1.23
Rtn3-203ENSMUST00000088169 Cngb1E1AZ71 1325 aa22.69■■□□□ 1.22
Rtn3-203ENSMUST00000088169 Top2bQ64511 1612 aa22.66■■□□□ 1.22
Rtn3-203ENSMUST00000088169 Cep164Q5DU05 1446 aa22.64■■□□□ 1.21
Rtn3-203ENSMUST00000088169 Ercc6F8VPZ5 1481 aa22.55■■□□□ 1.2
Rtn3-203ENSMUST00000088169 Wdr62Q3U3T8 1523 aa22.55■■□□□ 1.2
Rtn3-203ENSMUST00000088169 Frmpd1A2AKB4 1549 aa22.51■■□□□ 1.19
Rtn3-203ENSMUST00000088169 Rsf1E9PWW9 1441 aaKnown RBP22.49■■□□□ 1.19
Rtn3-203ENSMUST00000088169 Ccdc88bQ4QRL3 1481 aa22.41■■□□□ 1.18
Rtn3-203ENSMUST00000088169 Fmn1Q05860 1466 aa22.41■■□□□ 1.18
Rtn3-203ENSMUST00000088169 Chic1Q8CBW7 227 aa22.39■■□□□ 1.17
Rtn3-203ENSMUST00000088169 Thoc2B1AZI6 1594 aaKnown RBP22.38■■□□□ 1.17
Rtn3-203ENSMUST00000088169 Cc2d2aQ8CFW7 1633 aa22.32■■□□□ 1.16
Rtn3-203ENSMUST00000088169 Phldb1Q6PDH0 1371 aaKnown RBP22.23■■□□□ 1.15
Rtn3-203ENSMUST00000088169 TnnQ80Z71 1560 aa22.21■■□□□ 1.15
Rtn3-203ENSMUST00000088169 Lamc3Q9R0B6 1581 aa22.18■■□□□ 1.14
Rtn3-203ENSMUST00000088169 Unc13aQ4KUS2 1712 aa22.17■■□□□ 1.14
Rtn3-203ENSMUST00000088169 Top2aQ01320 1528 aaKnown RBP22.14■■□□□ 1.13
Rtn3-203ENSMUST00000088169 Fam135aQ6NS59 1506 aa22.12■■□□□ 1.13
Rtn3-203ENSMUST00000088169 Kif15Q6P9L6 1387 aa22.06■■□□□ 1.12
Rtn3-203ENSMUST00000088169 Baz1bQ9Z277 1479 aa22.03■■□□□ 1.12
Rtn3-203ENSMUST00000088169 Gab3Q8BSM5 595 aa22■■□□□ 1.11
Rtn3-203ENSMUST00000088169 Ubl4bQ9CQ84 188 aa21.95■■□□□ 1.1
Rtn3-203ENSMUST00000088169 Rapgef2Q8CHG7 1496 aa21.91■■□□□ 1.1
Rtn3-203ENSMUST00000088169 Ccdc18Q640L5 1455 aa21.88■■□□□ 1.09
Rtn3-203ENSMUST00000088169 Camsap1A2AHC3 1581 aa21.86■■□□□ 1.09
Rtn3-203ENSMUST00000088169 Cux2P70298 1426 aa21.82■■□□□ 1.08
Rtn3-203ENSMUST00000088169 NrkQ9R0G8 1455 aa21.75■■□□□ 1.07
Rtn3-203ENSMUST00000088169 Cep162Q6ZQ06 1403 aa21.72■■□□□ 1.07
Rtn3-203ENSMUST00000088169 Npm1Q61937 292 aaKnown RBP21.71■■□□□ 1.07
Rtn3-203ENSMUST00000088169 Il27Q8K3I6 234 aa21.69■■□□□ 1.06
Rtn3-203ENSMUST00000088169 Grin2bQ01097 1482 aa21.68■■□□□ 1.06
Rtn3-203ENSMUST00000088169 Shroom4Q1W617 1475 aa21.66■■□□□ 1.06
Rtn3-203ENSMUST00000088169 Npm2Q80W85 207 aa21.66■■□□□ 1.06
Rtn3-203ENSMUST00000088169 Dnajc5bQ9CQ94 199 aa21.63■■□□□ 1.05
Rtn3-203ENSMUST00000088169 Eif4g1Q6NZJ6 1600 aaKnown RBP21.63■■□□□ 1.05
Rtn3-203ENSMUST00000088169 Mrc2Q64449 1479 aa21.61■■□□□ 1.05
Rtn3-203ENSMUST00000088169 LrpprcQ6PB66 1392 aaKnown RBP21.6■■□□□ 1.05
Rtn3-203ENSMUST00000088169 PtprkP35822 1457 aa21.58■■□□□ 1.05
Rtn3-203ENSMUST00000088169 Efcab5A0JP43 1406 aa21.56■■□□□ 1.04
Rtn3-203ENSMUST00000088169 Rpgrip1Q9EPQ2 1331 aa21.55■■□□□ 1.04
Rtn3-203ENSMUST00000088169 PogzQ8BZH4 1409 aaKnown RBP21.54■■□□□ 1.04
Rtn3-203ENSMUST00000088169 Map3k1P53349 1493 aa21.51■■□□□ 1.03
Rtn3-203ENSMUST00000088169 Arhgap35Q91YM2 1499 aa21.51■■□□□ 1.03
Rtn3-203ENSMUST00000088169 Ehmt2Q9Z148 1263 aaKnown RBP21.48■■□□□ 1.03
Rtn3-203ENSMUST00000088169 Duox2A2AQ99 1517 aa21.45■■□□□ 1.02
Rtn3-203ENSMUST00000088169 Dhx29Q6PGC1 1365 aaKnown RBP21.44■■□□□ 1.02
Rtn3-203ENSMUST00000088169 Acin1Q9JIX8 1338 aaKnown RBP21.44■■□□□ 1.02
Rtn3-203ENSMUST00000088169 Myt1lP97500 1187 aa21.43■■□□□ 1.02
Rtn3-203ENSMUST00000088169 Mroh2bQ7M6Y6 1581 aa21.42■■□□□ 1.02
Rtn3-203ENSMUST00000088169 AqrQ8CFQ3 1481 aaKnown RBP21.37■■□□□ 1.01
Rtn3-203ENSMUST00000088169 Kif21aQ9QXL2 1672 aa21.35■■□□□ 1.01
Rtn3-203ENSMUST00000088169 Clip1Q922J3 1391 aa21.34■■□□□ 1.01
Rtn3-203ENSMUST00000088169 Crocc2F6XLV1 1638 aa21.32■■□□□ 1
Rtn3-203ENSMUST00000088169 Zeb1Q64318 1117 aa21.3■■□□□ 1
Rtn3-203ENSMUST00000088169 Carmil1Q6EDY6 1374 aa21.25■□□□□ 0.99
Rtn3-203ENSMUST00000088169 Eea1Q8BL66 1411 aa21.24■□□□□ 0.99
Rtn3-203ENSMUST00000088169 Samd9lQ69Z37 1561 aa21.23■□□□□ 0.99
Rtn3-203ENSMUST00000088169 SynmQ70IV5 1561 aa21.23■□□□□ 0.99
Rtn3-203ENSMUST00000088169 Setd5Q5XJV7 1441 aa21.14■□□□□ 0.98
Rtn3-203ENSMUST00000088169 Plb1Q3TTY0 1478 aa21.14■□□□□ 0.97
Rtn3-203ENSMUST00000088169 Rpap1Q80TE0 1409 aa21.12■□□□□ 0.97
Rtn3-203ENSMUST00000088169 Urb2E9Q7L1 1524 aaKnown RBP21.11■□□□□ 0.97
Rtn3-203ENSMUST00000088169 Polr1aO35134 1717 aaKnown RBP21.11■□□□□ 0.97
Rtn3-203ENSMUST00000088169 Erich3F6QRE9 1637 aa21.09■□□□□ 0.97
Rtn3-203ENSMUST00000088169 Ift140E9PY46 1464 aa21.08■□□□□ 0.97
Rtn3-203ENSMUST00000088169 Rad54l2Q99NG0 1466 aa21.08■□□□□ 0.97
Rtn3-203ENSMUST00000088169 Ankrd26Q811D2 1581 aa21.07■□□□□ 0.96
Rtn3-203ENSMUST00000088169 Arap1Q4LDD4 1452 aa21.06■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms