RNA–Protein interactions for RNA: ENSMUST00000087315.13

Vars-201, Transcript of Valine--tRNA ligase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vars, Length 4,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vars-201ENSMUST00000087315 Rhox8Q6VSS7 320 aa24.2■■□□□ 1.47
Vars-201ENSMUST00000087315 NischQ80TM9 1593 aa23.31■■□□□ 1.32
Vars-201ENSMUST00000087315 Ehmt2Q9Z148 1263 aaKnown RBP22.53■■□□□ 1.2
Vars-201ENSMUST00000087315 Rpgrip1Q9EPQ2 1331 aa22.5■■□□□ 1.19
Vars-201ENSMUST00000087315 Abcc9P70170 1546 aa22.36■■□□□ 1.17
Vars-201ENSMUST00000087315 Ccdc180J3QNE4 1664 aa22■■□□□ 1.11
Vars-201ENSMUST00000087315 Ccdc136Q3TVA9 1136 aa21.99■■□□□ 1.11
Vars-201ENSMUST00000087315 Acin1Q9JIX8 1338 aaKnown RBP21.97■■□□□ 1.11
Vars-201ENSMUST00000087315 Rtl1Q7M732 1744 aa21.93■■□□□ 1.1
Vars-201ENSMUST00000087315 Abcc8B2RUS7 1588 aa21.75■■□□□ 1.07
Vars-201ENSMUST00000087315 Gm35339A0A140LHH9 1649 aa21.72■■□□□ 1.07
Vars-201ENSMUST00000087315 Pcgf6Q99NA9 353 aa21.61■■□□□ 1.05
Vars-201ENSMUST00000087315 Trim41Q5NCC3 630 aa21.43■■□□□ 1.02
Vars-201ENSMUST00000087315 Gab3Q8BSM5 595 aa21.31■■□□□ 1
Vars-201ENSMUST00000087315 HrcG5E8J6 738 aa21.29■■□□□ 1
Vars-201ENSMUST00000087315 Cngb1E1AZ71 1325 aa21.26■□□□□ 0.99
Vars-201ENSMUST00000087315 Zeb1Q64318 1117 aa21.25■□□□□ 0.99
Vars-201ENSMUST00000087315 Supt5hO55201 1082 aaKnown RBP21.19■□□□□ 0.98
Vars-201ENSMUST00000087315 Zcchc6Q5BLK4 1491 aaKnown RBP21.13■□□□□ 0.97
Vars-201ENSMUST00000087315 Dcaf1Q80TR8 1506 aa20.98■□□□□ 0.95
Vars-201ENSMUST00000087315 Esf1Q3V1V3 845 aaKnown RBP20.97■□□□□ 0.95
Vars-201ENSMUST00000087315 Wdr66E9Q743 1299 aa20.97■□□□□ 0.95
Vars-201ENSMUST00000087315 Las1lA2BE28 776 aaKnown RBP20.82■□□□□ 0.92
Vars-201ENSMUST00000087315 Neurod1Q60867 357 aa20.8■□□□□ 0.92
Vars-201ENSMUST00000087315 Myt1lP97500 1187 aa20.64■□□□□ 0.89
Vars-201ENSMUST00000087315 UbtfP25976 765 aaKnown RBP20.58■□□□□ 0.89
Vars-201ENSMUST00000087315 NefmP08553 848 aa20.58■□□□□ 0.88
Vars-201ENSMUST00000087315 Npm2Q80W85 207 aa20.49■□□□□ 0.87
Vars-201ENSMUST00000087315 Rb1cc1Q9ESK9 1588 aa20.48■□□□□ 0.87
Vars-201ENSMUST00000087315 Mier1Q5UAK0 511 aa20.47■□□□□ 0.87
Vars-201ENSMUST00000087315 Sall2Q9QX96 1004 aa20.43■□□□□ 0.86
Vars-201ENSMUST00000087315 Ppargc1bQ8VHJ7 1014 aa20.42■□□□□ 0.86
Vars-201ENSMUST00000087315 Cep164Q5DU05 1446 aa20.37■□□□□ 0.85
Vars-201ENSMUST00000087315 Chic1Q8CBW7 227 aa20.36■□□□□ 0.85
Vars-201ENSMUST00000087315 Csrnp3P59055 597 aa20.25■□□□□ 0.83
Vars-201ENSMUST00000087315 1700123L14RikQ3V2K7 440 aa20.13■□□□□ 0.81
Vars-201ENSMUST00000087315 Cdk11bP24788 784 aaKnown RBP20.12■□□□□ 0.81
Vars-201ENSMUST00000087315 Ube2uB1AUC4 352 aa20.11■□□□□ 0.81
Vars-201ENSMUST00000087315 Baz1aO88379 1555 aa20.11■□□□□ 0.81
Vars-201ENSMUST00000087315 Nop58Q6DFW4 536 aaKnown RBP20.08■□□□□ 0.81
Vars-201ENSMUST00000087315 Gm38655A0A286YDK6 273 aa20.07■□□□□ 0.8
Vars-201ENSMUST00000087315 Anks4bQ8K3X6 423 aa20.06■□□□□ 0.8
Vars-201ENSMUST00000087315 CenpbP27790 599 aa20.05■□□□□ 0.8
Vars-201ENSMUST00000087315 Rsf1E9PWW9 1441 aaKnown RBP20.01■□□□□ 0.79
Vars-201ENSMUST00000087315 Aebp2Q9Z248 504 aaKnown RBP20■□□□□ 0.79
Vars-201ENSMUST00000087315 Kdm5dQ62240 1548 aa19.9■□□□□ 0.78
Vars-201ENSMUST00000087315 Il27Q8K3I6 234 aa19.89■□□□□ 0.77
Vars-201ENSMUST00000087315 ScribQ80U72 1612 aa19.87■□□□□ 0.77
Vars-201ENSMUST00000087315 Ap3b1Q9Z1T1 1105 aa19.84■□□□□ 0.77
Vars-201ENSMUST00000087315 ClspnQ80YR7 1315 aa19.83■□□□□ 0.76
Vars-201ENSMUST00000087315 Slc24a1Q91WD8 1130 aa19.78■□□□□ 0.76
Vars-201ENSMUST00000087315 Ccdc88bQ4QRL3 1481 aa19.78■□□□□ 0.76
Vars-201ENSMUST00000087315 TonslQ6NZL6 1363 aa19.78■□□□□ 0.76
Vars-201ENSMUST00000087315 Plekhg3Q4VAC9 1341 aa19.71■□□□□ 0.75
Vars-201ENSMUST00000087315 Aplp2Q06335 707 aa19.67■□□□□ 0.74
Vars-201ENSMUST00000087315 Fam50aQ9WV03 339 aaKnown RBP19.66■□□□□ 0.74
Vars-201ENSMUST00000087315 Brd4Q9ESU6 1400 aaKnown RBP19.66■□□□□ 0.74
Vars-201ENSMUST00000087315 NacadQ5SWP3 1504 aa19.66■□□□□ 0.74
Vars-201ENSMUST00000087315 NclP09405 707 aaKnown RBP19.58■□□□□ 0.73
Vars-201ENSMUST00000087315 Pelp1Q9DBD5 1123 aaKnown RBP19.58■□□□□ 0.73
Vars-201ENSMUST00000087315 Smarca2Q6DIC0 1577 aa19.57■□□□□ 0.72
Vars-201ENSMUST00000087315 Golga3P55937 1487 aa19.57■□□□□ 0.72
Vars-201ENSMUST00000087315 Stra8P70278 393 aa19.56■□□□□ 0.72
Vars-201ENSMUST00000087315 Eid3Q3V124 375 aa19.56■□□□□ 0.72
Vars-201ENSMUST00000087315 Mapk8ip2Q9ERE9 830 aa19.56■□□□□ 0.72
Vars-201ENSMUST00000087315 Myt1Q8CFC2 1127 aa19.52■□□□□ 0.71
Vars-201ENSMUST00000087315 Tnnt3Q9QZ47 272 aa19.43■□□□□ 0.7
Vars-201ENSMUST00000087315 Cecr2E9Q2Z1 1453 aa19.39■□□□□ 0.69
Vars-201ENSMUST00000087315 SafbD3YXK2 937 aaKnown RBP19.38■□□□□ 0.69
Vars-201ENSMUST00000087315 Lmod2Q3UHZ5 550 aa19.36■□□□□ 0.69
Vars-201ENSMUST00000087315 Clip1Q922J3 1391 aa19.35■□□□□ 0.69
Vars-201ENSMUST00000087315 Hnrnpul2Q00PI9 745 aaKnown RBP19.32■□□□□ 0.68
Vars-201ENSMUST00000087315 Eif5bQ05D44 1216 aaKnown RBP19.32■□□□□ 0.68
Vars-201ENSMUST00000087315 Fam71e1A1L3C1 212 aa19.31■□□□□ 0.68
Vars-201ENSMUST00000087315 Crybg2B7ZCC2 1516 aa19.27■□□□□ 0.68
Vars-201ENSMUST00000087315 Synj1Q8CHC4 1574 aa19.21■□□□□ 0.67
Vars-201ENSMUST00000087315 DiexfQ8BTT6 772 aaKnown RBP19.21■□□□□ 0.67
Vars-201ENSMUST00000087315 NrdcQ8BHG1 1161 aa19.16■□□□□ 0.66
Vars-201ENSMUST00000087315 Ttbk1Q6PCN3 1308 aa19.15■□□□□ 0.66
Vars-201ENSMUST00000087315 Sycp2Q9CUU3 1500 aa19.13■□□□□ 0.65
Vars-201ENSMUST00000087315 Cep162Q6ZQ06 1403 aa19.11■□□□□ 0.65
Vars-201ENSMUST00000087315 CftrP26361 1476 aa19.06■□□□□ 0.64
Vars-201ENSMUST00000087315 Rapgef2Q8CHG7 1496 aa19.04■□□□□ 0.64
Vars-201ENSMUST00000087315 Anp32aO35381 247 aa19.02■□□□□ 0.64
Vars-201ENSMUST00000087315 Npm1Q61937 292 aaKnown RBP18.96■□□□□ 0.63
Vars-201ENSMUST00000087315 Bcl11aQ9QYE3 773 aa18.94■□□□□ 0.62
Vars-201ENSMUST00000087315 Amer1Q7TS75 1132 aa18.93■□□□□ 0.62
Vars-201ENSMUST00000087315 Calr4Q3TQS0 420 aa18.9■□□□□ 0.62
Vars-201ENSMUST00000087315 Cc2d2aQ8CFW7 1633 aa18.88■□□□□ 0.61
Vars-201ENSMUST00000087315 BlmO88700 1416 aa18.87■□□□□ 0.61
Vars-201ENSMUST00000087315 Setd5Q5XJV7 1441 aa18.86■□□□□ 0.61
Vars-201ENSMUST00000087315 Fmn1Q05860 1466 aa18.85■□□□□ 0.61
Vars-201ENSMUST00000087315 Chic2Q9D9G3 165 aa18.8■□□□□ 0.6
Vars-201ENSMUST00000087315 Zbtb7cQ8VCZ7 619 aa18.8■□□□□ 0.6
Vars-201ENSMUST00000087315 Eea1Q8BL66 1411 aa18.77■□□□□ 0.6
Vars-201ENSMUST00000087315 Ppp4r2Q0VGB7 417 aa18.77■□□□□ 0.6
Vars-201ENSMUST00000087315 Anp32bQ9EST5 272 aaKnown RBP18.76■□□□□ 0.59
Vars-201ENSMUST00000087315 Ncapd3Q6ZQK0 1506 aa18.75■□□□□ 0.59
Vars-201ENSMUST00000087315 Zbtb4Q5F293 982 aa18.75■□□□□ 0.59
Vars-201ENSMUST00000087315 Hspa5P20029 655 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms