RNA–Protein interactions for RNA: ENSMUST00000072249.12

Cdv3-202, Transcript of Protein CDV3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cdv3, Length 3,787 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdv3-202ENSMUST00000072249 Rhox8Q6VSS7 320 aa30.78■■■□□ 2.52
Cdv3-202ENSMUST00000072249 NischQ80TM9 1593 aa29.64■■■□□ 2.34
Cdv3-202ENSMUST00000072249 Ehmt2Q9Z148 1263 aaKnown RBP28.64■■■□□ 2.18
Cdv3-202ENSMUST00000072249 Ccdc136Q3TVA9 1136 aa28.33■■■□□ 2.13
Cdv3-202ENSMUST00000072249 Abcc9P70170 1546 aa28.13■■■□□ 2.09
Cdv3-202ENSMUST00000072249 Abcc8B2RUS7 1588 aa27.63■■■□□ 2.01
Cdv3-202ENSMUST00000072249 Gab3Q8BSM5 595 aa27.23■■□□□ 1.95
Cdv3-202ENSMUST00000072249 Trim41Q5NCC3 630 aa27.2■■□□□ 1.94
Cdv3-202ENSMUST00000072249 Cngb1E1AZ71 1325 aa27.14■■□□□ 1.93
Cdv3-202ENSMUST00000072249 Gm35339A0A140LHH9 1649 aa27.1■■□□□ 1.93
Cdv3-202ENSMUST00000072249 Rpgrip1Q9EPQ2 1331 aa26.85■■□□□ 1.89
Cdv3-202ENSMUST00000072249 Ccdc180J3QNE4 1664 aa26.76■■□□□ 1.87
Cdv3-202ENSMUST00000072249 Esf1Q3V1V3 845 aaKnown RBP26.73■■□□□ 1.87
Cdv3-202ENSMUST00000072249 Acin1Q9JIX8 1338 aaKnown RBP26.64■■□□□ 1.86
Cdv3-202ENSMUST00000072249 Zeb1Q64318 1117 aa26.57■■□□□ 1.84
Cdv3-202ENSMUST00000072249 Zcchc6Q5BLK4 1491 aaKnown RBP26.52■■□□□ 1.84
Cdv3-202ENSMUST00000072249 Rtl1Q7M732 1744 aa26.45■■□□□ 1.82
Cdv3-202ENSMUST00000072249 HrcG5E8J6 738 aa26.41■■□□□ 1.82
Cdv3-202ENSMUST00000072249 Myt1lP97500 1187 aa26.29■■□□□ 1.8
Cdv3-202ENSMUST00000072249 Pcgf6Q99NA9 353 aa26.1■■□□□ 1.77
Cdv3-202ENSMUST00000072249 UbtfP25976 765 aaKnown RBP26.05■■□□□ 1.76
Cdv3-202ENSMUST00000072249 Chic1Q8CBW7 227 aa26.02■■□□□ 1.76
Cdv3-202ENSMUST00000072249 Rb1cc1Q9ESK9 1588 aa25.99■■□□□ 1.75
Cdv3-202ENSMUST00000072249 Ppargc1bQ8VHJ7 1014 aa25.99■■□□□ 1.75
Cdv3-202ENSMUST00000072249 Wdr66E9Q743 1299 aa25.98■■□□□ 1.75
Cdv3-202ENSMUST00000072249 Supt5hO55201 1082 aaKnown RBP25.92■■□□□ 1.74
Cdv3-202ENSMUST00000072249 Npm2Q80W85 207 aa25.92■■□□□ 1.74
Cdv3-202ENSMUST00000072249 Dcaf1Q80TR8 1506 aa25.91■■□□□ 1.74
Cdv3-202ENSMUST00000072249 Il27Q8K3I6 234 aa25.69■■□□□ 1.7
Cdv3-202ENSMUST00000072249 Mier1Q5UAK0 511 aa25.59■■□□□ 1.69
Cdv3-202ENSMUST00000072249 Kdm5dQ62240 1548 aa25.51■■□□□ 1.67
Cdv3-202ENSMUST00000072249 Ap3b1Q9Z1T1 1105 aa25.5■■□□□ 1.67
Cdv3-202ENSMUST00000072249 Las1lA2BE28 776 aaKnown RBP25.47■■□□□ 1.67
Cdv3-202ENSMUST00000072249 ScribQ80U72 1612 aa25.41■■□□□ 1.66
Cdv3-202ENSMUST00000072249 Baz1aO88379 1555 aa25.38■■□□□ 1.65
Cdv3-202ENSMUST00000072249 NefmP08553 848 aa25.28■■□□□ 1.64
Cdv3-202ENSMUST00000072249 Cep164Q5DU05 1446 aa25.28■■□□□ 1.64
Cdv3-202ENSMUST00000072249 Plekhg3Q4VAC9 1341 aa25.27■■□□□ 1.64
Cdv3-202ENSMUST00000072249 NacadQ5SWP3 1504 aa25.27■■□□□ 1.64
Cdv3-202ENSMUST00000072249 Rsf1E9PWW9 1441 aaKnown RBP25.2■■□□□ 1.62
Cdv3-202ENSMUST00000072249 Ube2uB1AUC4 352 aa25.17■■□□□ 1.62
Cdv3-202ENSMUST00000072249 Sall2Q9QX96 1004 aa25.11■■□□□ 1.61
Cdv3-202ENSMUST00000072249 Neurod1Q60867 357 aa25.06■■□□□ 1.6
Cdv3-202ENSMUST00000072249 DiexfQ8BTT6 772 aaKnown RBP25.04■■□□□ 1.6
Cdv3-202ENSMUST00000072249 Brd4Q9ESU6 1400 aaKnown RBP25.03■■□□□ 1.6
Cdv3-202ENSMUST00000072249 Ccdc88bQ4QRL3 1481 aa25.01■■□□□ 1.59
Cdv3-202ENSMUST00000072249 Eid3Q3V124 375 aa24.99■■□□□ 1.59
Cdv3-202ENSMUST00000072249 Mapk8ip2Q9ERE9 830 aa24.95■■□□□ 1.58
Cdv3-202ENSMUST00000072249 Cecr2E9Q2Z1 1453 aa24.89■■□□□ 1.58
Cdv3-202ENSMUST00000072249 Fam50aQ9WV03 339 aaKnown RBP24.89■■□□□ 1.58
Cdv3-202ENSMUST00000072249 Lmod2Q3UHZ5 550 aa24.85■■□□□ 1.57
Cdv3-202ENSMUST00000072249 Aebp2Q9Z248 504 aaKnown RBP24.8■■□□□ 1.56
Cdv3-202ENSMUST00000072249 Gm38655A0A286YDK6 273 aa24.77■■□□□ 1.56
Cdv3-202ENSMUST00000072249 Slc24a1Q91WD8 1130 aa24.76■■□□□ 1.55
Cdv3-202ENSMUST00000072249 Golga3P55937 1487 aa24.73■■□□□ 1.55
Cdv3-202ENSMUST00000072249 Nop58Q6DFW4 536 aaKnown RBP24.71■■□□□ 1.55
Cdv3-202ENSMUST00000072249 CenpbP27790 599 aa24.71■■□□□ 1.55
Cdv3-202ENSMUST00000072249 Cdk11bP24788 784 aaKnown RBP24.69■■□□□ 1.54
Cdv3-202ENSMUST00000072249 TonslQ6NZL6 1363 aa24.68■■□□□ 1.54
Cdv3-202ENSMUST00000072249 Clip1Q922J3 1391 aa24.59■■□□□ 1.53
Cdv3-202ENSMUST00000072249 Sycp2Q9CUU3 1500 aa24.57■■□□□ 1.52
Cdv3-202ENSMUST00000072249 Smarca2Q6DIC0 1577 aa24.55■■□□□ 1.52
Cdv3-202ENSMUST00000072249 Csrnp3P59055 597 aa24.5■■□□□ 1.51
Cdv3-202ENSMUST00000072249 NclP09405 707 aaKnown RBP24.47■■□□□ 1.51
Cdv3-202ENSMUST00000072249 Myt1Q8CFC2 1127 aa24.43■■□□□ 1.5
Cdv3-202ENSMUST00000072249 Synj1Q8CHC4 1574 aa24.38■■□□□ 1.49
Cdv3-202ENSMUST00000072249 Amer1Q7TS75 1132 aa24.36■■□□□ 1.49
Cdv3-202ENSMUST00000072249 ClspnQ80YR7 1315 aa24.33■■□□□ 1.48
Cdv3-202ENSMUST00000072249 Npm1Q61937 292 aaKnown RBP24.32■■□□□ 1.48
Cdv3-202ENSMUST00000072249 CftrP26361 1476 aa24.29■■□□□ 1.48
Cdv3-202ENSMUST00000072249 Zbtb7cQ8VCZ7 619 aa24.18■■□□□ 1.46
Cdv3-202ENSMUST00000072249 Crybg2B7ZCC2 1516 aa24.15■■□□□ 1.46
Cdv3-202ENSMUST00000072249 Ubl4bQ9CQ84 188 aa24.14■■□□□ 1.45
Cdv3-202ENSMUST00000072249 Chic2Q9D9G3 165 aa24.13■■□□□ 1.45
Cdv3-202ENSMUST00000072249 Kif15Q6P9L6 1387 aa24.09■■□□□ 1.45
Cdv3-202ENSMUST00000072249 Setd5Q5XJV7 1441 aa24.08■■□□□ 1.44
Cdv3-202ENSMUST00000072249 Eif5bQ05D44 1216 aaKnown RBP24.07■■□□□ 1.44
Cdv3-202ENSMUST00000072249 Bcl11aQ9QYE3 773 aa24.07■■□□□ 1.44
Cdv3-202ENSMUST00000072249 Cep162Q6ZQ06 1403 aa24.07■■□□□ 1.44
Cdv3-202ENSMUST00000072249 Rapgef2Q8CHG7 1496 aa24.07■■□□□ 1.44
Cdv3-202ENSMUST00000072249 BlmO88700 1416 aa24.06■■□□□ 1.44
Cdv3-202ENSMUST00000072249 Anks4bQ8K3X6 423 aa24.02■■□□□ 1.44
Cdv3-202ENSMUST00000072249 Zbtb4Q5F293 982 aa24.02■■□□□ 1.44
Cdv3-202ENSMUST00000072249 1700123L14RikQ3V2K7 440 aa23.99■■□□□ 1.43
Cdv3-202ENSMUST00000072249 Fkbp15Q6P9Q6 1216 aaKnown RBP23.93■■□□□ 1.42
Cdv3-202ENSMUST00000072249 Fmn1Q05860 1466 aa23.81■■□□□ 1.4
Cdv3-202ENSMUST00000072249 BicraF8VPZ9 1578 aa23.8■■□□□ 1.4
Cdv3-202ENSMUST00000072249 Cc2d2aQ8CFW7 1633 aa23.77■■□□□ 1.4
Cdv3-202ENSMUST00000072249 SafbD3YXK2 937 aaKnown RBP23.76■■□□□ 1.39
Cdv3-202ENSMUST00000072249 Eea1Q8BL66 1411 aa23.76■■□□□ 1.39
Cdv3-202ENSMUST00000072249 Hspa5P20029 655 aaKnown RBP23.75■■□□□ 1.39
Cdv3-202ENSMUST00000072249 Ifnlr1Q8CGK5 535 aa23.75■■□□□ 1.39
Cdv3-202ENSMUST00000072249 Smarca4Q3TKT4 1613 aaKnown RBP23.65■■□□□ 1.38
Cdv3-202ENSMUST00000072249 Hnrnpul2Q00PI9 745 aaKnown RBP23.65■■□□□ 1.38
Cdv3-202ENSMUST00000072249 Sin3aQ60520 1274 aaKnown RBP23.64■■□□□ 1.38
Cdv3-202ENSMUST00000072249 PrkcshO08795 521 aa23.63■■□□□ 1.37
Cdv3-202ENSMUST00000072249 Cttnbp2B9EJA2 1648 aa23.59■■□□□ 1.37
Cdv3-202ENSMUST00000072249 Stra8P70278 393 aa23.56■■□□□ 1.36
Cdv3-202ENSMUST00000072249 NrdcQ8BHG1 1161 aa23.55■■□□□ 1.36
Cdv3-202ENSMUST00000072249 P3h3Q8CG70 732 aa23.52■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 104.7 ms