RNA–Protein interactions for RNA: ENSMUST00000071648.11

Vegfa-202, Transcript of Vascular endothelial growth factor A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vegfa, Length 3,451 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vegfa-202ENSMUST00000071648 NischQ80TM9 1593 aa27.75■■■□□ 2.03
Vegfa-202ENSMUST00000071648 Gm35339A0A140LHH9 1649 aa26.87■■□□□ 1.89
Vegfa-202ENSMUST00000071648 Abcc9P70170 1546 aa26.68■■□□□ 1.86
Vegfa-202ENSMUST00000071648 Abcc8B2RUS7 1588 aa26.35■■□□□ 1.81
Vegfa-202ENSMUST00000071648 Rhox8Q6VSS7 320 aa26.24■■□□□ 1.79
Vegfa-202ENSMUST00000071648 ScribQ80U72 1612 aa24.75■■□□□ 1.55
Vegfa-202ENSMUST00000071648 Kdm5dQ62240 1548 aa24.38■■□□□ 1.49
Vegfa-202ENSMUST00000071648 NacadQ5SWP3 1504 aa24.31■■□□□ 1.48
Vegfa-202ENSMUST00000071648 Ccdc136Q3TVA9 1136 aa24.29■■□□□ 1.48
Vegfa-202ENSMUST00000071648 Rb1cc1Q9ESK9 1588 aa24.27■■□□□ 1.48
Vegfa-202ENSMUST00000071648 Dcaf1Q80TR8 1506 aa24.22■■□□□ 1.47
Vegfa-202ENSMUST00000071648 Zcchc6Q5BLK4 1491 aaKnown RBP24.05■■□□□ 1.44
Vegfa-202ENSMUST00000071648 Baz1aO88379 1555 aa23.87■■□□□ 1.41
Vegfa-202ENSMUST00000071648 Rtl1Q7M732 1744 aa23.81■■□□□ 1.4
Vegfa-202ENSMUST00000071648 Sycp2Q9CUU3 1500 aa23.73■■□□□ 1.39
Vegfa-202ENSMUST00000071648 Trim41Q5NCC3 630 aa23.56■■□□□ 1.36
Vegfa-202ENSMUST00000071648 Ccdc180J3QNE4 1664 aa23.5■■□□□ 1.35
Vegfa-202ENSMUST00000071648 Esf1Q3V1V3 845 aaKnown RBP23.38■■□□□ 1.33
Vegfa-202ENSMUST00000071648 Cngb1E1AZ71 1325 aa23.35■■□□□ 1.33
Vegfa-202ENSMUST00000071648 Crybg2B7ZCC2 1516 aa23.32■■□□□ 1.32
Vegfa-202ENSMUST00000071648 BicraF8VPZ9 1578 aa23.16■■□□□ 1.3
Vegfa-202ENSMUST00000071648 Smarca2Q6DIC0 1577 aa23.16■■□□□ 1.3
Vegfa-202ENSMUST00000071648 Cecr2E9Q2Z1 1453 aa23.1■■□□□ 1.29
Vegfa-202ENSMUST00000071648 Brd4Q9ESU6 1400 aaKnown RBP23■■□□□ 1.27
Vegfa-202ENSMUST00000071648 HrcG5E8J6 738 aa22.85■■□□□ 1.25
Vegfa-202ENSMUST00000071648 Gab3Q8BSM5 595 aa22.82■■□□□ 1.24
Vegfa-202ENSMUST00000071648 Synj1Q8CHC4 1574 aa22.66■■□□□ 1.22
Vegfa-202ENSMUST00000071648 CftrP26361 1476 aa22.65■■□□□ 1.22
Vegfa-202ENSMUST00000071648 Pds5bQ4VA53 1446 aaKnown RBP22.64■■□□□ 1.21
Vegfa-202ENSMUST00000071648 Smarca4Q3TKT4 1613 aaKnown RBP22.62■■□□□ 1.21
Vegfa-202ENSMUST00000071648 Ehmt2Q9Z148 1263 aaKnown RBP22.61■■□□□ 1.21
Vegfa-202ENSMUST00000071648 Chic1Q8CBW7 227 aa22.6■■□□□ 1.21
Vegfa-202ENSMUST00000071648 Atad2bE9Q166 1460 aaKnown RBP22.55■■□□□ 1.2
Vegfa-202ENSMUST00000071648 Golga3P55937 1487 aa22.5■■□□□ 1.19
Vegfa-202ENSMUST00000071648 Il27Q8K3I6 234 aa22.49■■□□□ 1.19
Vegfa-202ENSMUST00000071648 Iqgap2Q3UQ44 1575 aa22.43■■□□□ 1.18
Vegfa-202ENSMUST00000071648 Cttnbp2B9EJA2 1648 aa22.37■■□□□ 1.17
Vegfa-202ENSMUST00000071648 Ercc6F8VPZ5 1481 aa22.35■■□□□ 1.17
Vegfa-202ENSMUST00000071648 Rsf1E9PWW9 1441 aaKnown RBP22.33■■□□□ 1.17
Vegfa-202ENSMUST00000071648 Npm2Q80W85 207 aa22.29■■□□□ 1.16
Vegfa-202ENSMUST00000071648 Ccdc88bQ4QRL3 1481 aa22.28■■□□□ 1.16
Vegfa-202ENSMUST00000071648 Cep164Q5DU05 1446 aa22.28■■□□□ 1.16
Vegfa-202ENSMUST00000071648 Ubl4bQ9CQ84 188 aa22.24■■□□□ 1.15
Vegfa-202ENSMUST00000071648 Myt1lP97500 1187 aa22.22■■□□□ 1.15
Vegfa-202ENSMUST00000071648 Kif15Q6P9L6 1387 aa22.12■■□□□ 1.13
Vegfa-202ENSMUST00000071648 Zeb1Q64318 1117 aa22.12■■□□□ 1.13
Vegfa-202ENSMUST00000071648 Frmpd1A2AKB4 1549 aa22.1■■□□□ 1.13
Vegfa-202ENSMUST00000071648 Npm1Q61937 292 aaKnown RBP22.04■■□□□ 1.12
Vegfa-202ENSMUST00000071648 Wdr62Q3U3T8 1523 aa21.98■■□□□ 1.11
Vegfa-202ENSMUST00000071648 Dnajc5bQ9CQ94 199 aa21.97■■□□□ 1.11
Vegfa-202ENSMUST00000071648 Fmn1Q05860 1466 aa21.96■■□□□ 1.11
Vegfa-202ENSMUST00000071648 Phldb1Q6PDH0 1371 aaKnown RBP21.95■■□□□ 1.1
Vegfa-202ENSMUST00000071648 Cc2d2aQ8CFW7 1633 aa21.92■■□□□ 1.1
Vegfa-202ENSMUST00000071648 Top2bQ64511 1612 aa21.88■■□□□ 1.09
Vegfa-202ENSMUST00000071648 Cux2P70298 1426 aa21.77■■□□□ 1.07
Vegfa-202ENSMUST00000071648 Ccdc18Q640L5 1455 aa21.7■■□□□ 1.06
Vegfa-202ENSMUST00000071648 Thoc2B1AZI6 1594 aaKnown RBP21.67■■□□□ 1.06
Vegfa-202ENSMUST00000071648 Ap3b1Q9Z1T1 1105 aa21.63■■□□□ 1.05
Vegfa-202ENSMUST00000071648 Top2aQ01320 1528 aaKnown RBP21.56■■□□□ 1.04
Vegfa-202ENSMUST00000071648 UbtfP25976 765 aaKnown RBP21.56■■□□□ 1.04
Vegfa-202ENSMUST00000071648 Rapgef2Q8CHG7 1496 aa21.52■■□□□ 1.04
Vegfa-202ENSMUST00000071648 Lamc3Q9R0B6 1581 aa21.52■■□□□ 1.03
Vegfa-202ENSMUST00000071648 Cep162Q6ZQ06 1403 aa21.49■■□□□ 1.03
Vegfa-202ENSMUST00000071648 Fam135aQ6NS59 1506 aa21.44■■□□□ 1.02
Vegfa-202ENSMUST00000071648 Acin1Q9JIX8 1338 aaKnown RBP21.43■■□□□ 1.02
Vegfa-202ENSMUST00000071648 LrpprcQ6PB66 1392 aaKnown RBP21.43■■□□□ 1.02
Vegfa-202ENSMUST00000071648 Plekhg3Q4VAC9 1341 aa21.42■■□□□ 1.02
Vegfa-202ENSMUST00000071648 Unc13aQ4KUS2 1712 aa21.41■■□□□ 1.02
Vegfa-202ENSMUST00000071648 PtprkP35822 1457 aa21.39■■□□□ 1.01
Vegfa-202ENSMUST00000071648 Camsap1A2AHC3 1581 aa21.38■■□□□ 1.01
Vegfa-202ENSMUST00000071648 Clip1Q922J3 1391 aa21.38■■□□□ 1.01
Vegfa-202ENSMUST00000071648 Dhx29Q6PGC1 1365 aaKnown RBP21.37■■□□□ 1.01
Vegfa-202ENSMUST00000071648 TnnQ80Z71 1560 aa21.36■■□□□ 1.01
Vegfa-202ENSMUST00000071648 Mrc2Q64449 1479 aa21.34■■□□□ 1.01
Vegfa-202ENSMUST00000071648 Rpgrip1Q9EPQ2 1331 aa21.31■■□□□ 1
Vegfa-202ENSMUST00000071648 Grin2bQ01097 1482 aa21.28■■□□□ 1
Vegfa-202ENSMUST00000071648 Baz1bQ9Z277 1479 aa21.27■■□□□ 1
Vegfa-202ENSMUST00000071648 Shroom4Q1W617 1475 aa21.25■□□□□ 0.99
Vegfa-202ENSMUST00000071648 Lmod2Q3UHZ5 550 aa21.24■□□□□ 0.99
Vegfa-202ENSMUST00000071648 Setd5Q5XJV7 1441 aa21.22■□□□□ 0.99
Vegfa-202ENSMUST00000071648 Duox2A2AQ99 1517 aa21.21■□□□□ 0.99
Vegfa-202ENSMUST00000071648 PogzQ8BZH4 1409 aaKnown RBP21.2■□□□□ 0.98
Vegfa-202ENSMUST00000071648 NrkQ9R0G8 1455 aa21.19■□□□□ 0.98
Vegfa-202ENSMUST00000071648 Arhgap35Q91YM2 1499 aa21.16■□□□□ 0.98
Vegfa-202ENSMUST00000071648 Efcab5A0JP43 1406 aa21.14■□□□□ 0.98
Vegfa-202ENSMUST00000071648 Mier1Q5UAK0 511 aa21.14■□□□□ 0.97
Vegfa-202ENSMUST00000071648 Rad54l2Q99NG0 1466 aa21.11■□□□□ 0.97
Vegfa-202ENSMUST00000071648 Eea1Q8BL66 1411 aa21.11■□□□□ 0.97
Vegfa-202ENSMUST00000071648 Plb1Q3TTY0 1478 aa21.03■□□□□ 0.96
Vegfa-202ENSMUST00000071648 Urb2E9Q7L1 1524 aaKnown RBP21.03■□□□□ 0.96
Vegfa-202ENSMUST00000071648 Mroh2bQ7M6Y6 1581 aa21.01■□□□□ 0.95
Vegfa-202ENSMUST00000071648 Carmil1Q6EDY6 1374 aa20.99■□□□□ 0.95
Vegfa-202ENSMUST00000071648 Kif21aQ9QXL2 1672 aa20.98■□□□□ 0.95
Vegfa-202ENSMUST00000071648 BlmO88700 1416 aa20.97■□□□□ 0.95
Vegfa-202ENSMUST00000071648 Crocc2F6XLV1 1638 aa20.96■□□□□ 0.95
Vegfa-202ENSMUST00000071648 Fam50aQ9WV03 339 aaKnown RBP20.94■□□□□ 0.94
Vegfa-202ENSMUST00000071648 Arhgap27A2AB59 869 aa20.94■□□□□ 0.94
Vegfa-202ENSMUST00000071648 Fkbp15Q6P9Q6 1216 aaKnown RBP20.92■□□□□ 0.94
Vegfa-202ENSMUST00000071648 Ube2uB1AUC4 352 aa20.89■□□□□ 0.93
Vegfa-202ENSMUST00000071648 Map3k1P53349 1493 aa20.88■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 88.6 ms