RNA–Protein interactions for RNA: ENSMUST00000060516.13

Cd44-202, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 3,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-202ENSMUST00000060516 Gm35339A0A140LHH9 1649 aa10.02□□□□□ -0.81
Cd44-202ENSMUST00000060516 NischQ80TM9 1593 aa9.34□□□□□ -0.91
Cd44-202ENSMUST00000060516 Chic1Q8CBW7 227 aa9.31□□□□□ -0.92
Cd44-202ENSMUST00000060516 Abcc8B2RUS7 1588 aa9.23□□□□□ -0.93
Cd44-202ENSMUST00000060516 Abcc9P70170 1546 aa9.22□□□□□ -0.93
Cd44-202ENSMUST00000060516 ScribQ80U72 1612 aa9.08□□□□□ -0.96
Cd44-202ENSMUST00000060516 NacadQ5SWP3 1504 aa8.95□□□□□ -0.98
Cd44-202ENSMUST00000060516 Baz1bQ9Z277 1479 aa8.9□□□□□ -0.98
Cd44-202ENSMUST00000060516 Plppr3Q7TPB0 716 aa8.75□□□□□ -1.01
Cd44-202ENSMUST00000060516 Sycp2Q9CUU3 1500 aa8.73□□□□□ -1.01
Cd44-202ENSMUST00000060516 Thoc2B1AZI6 1594 aaKnown RBP8.71□□□□□ -1.01
Cd44-202ENSMUST00000060516 Kdm5dQ62240 1548 aa8.69□□□□□ -1.02
Cd44-202ENSMUST00000060516 Dcaf1Q80TR8 1506 aa8.68□□□□□ -1.02
Cd44-202ENSMUST00000060516 Dnajc5P60904 198 aa8.67□□□□□ -1.02
Cd44-202ENSMUST00000060516 Pds5bQ4VA53 1446 aaKnown RBP8.65□□□□□ -1.02
Cd44-202ENSMUST00000060516 Ube2uB1AUC4 352 aa8.65□□□□□ -1.02
Cd44-202ENSMUST00000060516 Mapk8ip2Q9ERE9 830 aa8.59□□□□□ -1.03
Cd44-202ENSMUST00000060516 Dnajc5bQ9CQ94 199 aa8.54□□□□□ -1.04
Cd44-202ENSMUST00000060516 BicraF8VPZ9 1578 aa8.54□□□□□ -1.04
Cd44-202ENSMUST00000060516 Kcna4Q61423 654 aa8.53□□□□□ -1.04
Cd44-202ENSMUST00000060516 Rtl1Q7M732 1744 aa8.52□□□□□ -1.05
Cd44-202ENSMUST00000060516 Phf23Q8BSN5 401 aa8.51□□□□□ -1.05
Cd44-202ENSMUST00000060516 Fam135aQ6NS59 1506 aa8.48□□□□□ -1.05
Cd44-202ENSMUST00000060516 Atad2bE9Q166 1460 aaKnown RBP8.42□□□□□ -1.06
Cd44-202ENSMUST00000060516 Ercc6F8VPZ5 1481 aa8.4□□□□□ -1.06
Cd44-202ENSMUST00000060516 Ccdc180J3QNE4 1664 aa8.39□□□□□ -1.07
Cd44-202ENSMUST00000060516 Crybg2B7ZCC2 1516 aa8.37□□□□□ -1.07
Cd44-202ENSMUST00000060516 Cc2d2aQ8CFW7 1633 aa8.37□□□□□ -1.07
Cd44-202ENSMUST00000060516 Gab3Q8BSM5 595 aa8.34□□□□□ -1.07
Cd44-202ENSMUST00000060516 Rpgrip1Q9EPQ2 1331 aa8.32□□□□□ -1.08
Cd44-202ENSMUST00000060516 Smarca2Q6DIC0 1577 aa8.29□□□□□ -1.08
Cd44-202ENSMUST00000060516 Rb1cc1Q9ESK9 1588 aa8.27□□□□□ -1.08
Cd44-202ENSMUST00000060516 Shroom2A2ALU4 1481 aa8.23□□□□□ -1.09
Cd44-202ENSMUST00000060516 Zcchc6Q5BLK4 1491 aaKnown RBP8.22□□□□□ -1.09
Cd44-202ENSMUST00000060516 Phldb1Q6PDH0 1371 aaKnown RBP8.21□□□□□ -1.09
Cd44-202ENSMUST00000060516 Mrc2Q64449 1479 aa8.16□□□□□ -1.1
Cd44-202ENSMUST00000060516 Rhox8Q6VSS7 320 aa8.14□□□□□ -1.11
Cd44-202ENSMUST00000060516 Wdr62Q3U3T8 1523 aa8.14□□□□□ -1.11
Cd44-202ENSMUST00000060516 Ppargc1bQ8VHJ7 1014 aa8.14□□□□□ -1.11
Cd44-202ENSMUST00000060516 Smarca4Q3TKT4 1613 aaKnown RBP8.12□□□□□ -1.11
Cd44-202ENSMUST00000060516 Acin1Q9JIX8 1338 aaKnown RBP8.11□□□□□ -1.11
Cd44-202ENSMUST00000060516 Rsf1E9PWW9 1441 aaKnown RBP8.1□□□□□ -1.11
Cd44-202ENSMUST00000060516 Zcchc11B2RX14 1644 aaKnown RBP8.1□□□□□ -1.11
Cd44-202ENSMUST00000060516 Iqgap2Q3UQ44 1575 aa8.08□□□□□ -1.12
Cd44-202ENSMUST00000060516 Baz1aO88379 1555 aa8.06□□□□□ -1.12
Cd44-202ENSMUST00000060516 Senp3Q9EP97 568 aaKnown RBP8.05□□□□□ -1.12
Cd44-202ENSMUST00000060516 Col17a1Q07563 1470 aa8.03□□□□□ -1.12
Cd44-202ENSMUST00000060516 Frmpd1A2AKB4 1549 aa8.01□□□□□ -1.13
Cd44-202ENSMUST00000060516 Eif4g3Q80XI3 1579 aaKnown RBP7.99□□□□□ -1.13
Cd44-202ENSMUST00000060516 Top2bQ64511 1612 aa7.96□□□□□ -1.14
Cd44-202ENSMUST00000060516 Lrriq1Q0P5X1 1673 aa7.93□□□□□ -1.14
Cd44-202ENSMUST00000060516 HrcG5E8J6 738 aa7.93□□□□□ -1.14
Cd44-202ENSMUST00000060516 Pcgf6Q99NA9 353 aa7.9□□□□□ -1.14
Cd44-202ENSMUST00000060516 Ubl4bQ9CQ84 188 aa7.88□□□□□ -1.15
Cd44-202ENSMUST00000060516 Ehmt2Q9Z148 1263 aaKnown RBP7.88□□□□□ -1.15
Cd44-202ENSMUST00000060516 Unc13aQ4KUS2 1712 aa7.87□□□□□ -1.15
Cd44-202ENSMUST00000060516 Arhgef5E9Q7D5 1581 aa7.86□□□□□ -1.15
Cd44-202ENSMUST00000060516 Trim41Q5NCC3 630 aa7.83□□□□□ -1.16
Cd44-202ENSMUST00000060516 Pabpn1Q8CCS6 302 aaKnown RBP7.8□□□□□ -1.16
Cd44-202ENSMUST00000060516 Cttnbp2B9EJA2 1648 aa7.72□□□□□ -1.17
Cd44-202ENSMUST00000060516 Kif21aQ9QXL2 1672 aa7.69□□□□□ -1.18
Cd44-202ENSMUST00000060516 Supt5hO55201 1082 aaKnown RBP7.68□□□□□ -1.18
Cd44-202ENSMUST00000060516 Rusc2Q80U22 1514 aa7.66□□□□□ -1.18
Cd44-202ENSMUST00000060516 Slc4a1apE9PX68 744 aa7.66□□□□□ -1.18
Cd44-202ENSMUST00000060516 Cecr2E9Q2Z1 1453 aa7.66□□□□□ -1.18
Cd44-202ENSMUST00000060516 Dmrt2Q8BG36 561 aa7.64□□□□□ -1.19
Cd44-202ENSMUST00000060516 Adgrl3Q80TS3 1537 aa7.64□□□□□ -1.19
Cd44-202ENSMUST00000060516 Pbrm1Q8BSQ9 1634 aaKnown RBP7.64□□□□□ -1.19
Cd44-202ENSMUST00000060516 Ift140E9PY46 1464 aa7.64□□□□□ -1.19
Cd44-202ENSMUST00000060516 Cep164Q5DU05 1446 aa7.64□□□□□ -1.19
Cd44-202ENSMUST00000060516 Fam71e1A1L3C1 212 aa7.64□□□□□ -1.19
Cd44-202ENSMUST00000060516 Neurod1Q60867 357 aa7.62□□□□□ -1.19
Cd44-202ENSMUST00000060516 Cux2P70298 1426 aa7.61□□□□□ -1.19
Cd44-202ENSMUST00000060516 Plb1Q3TTY0 1478 aa7.61□□□□□ -1.19
Cd44-202ENSMUST00000060516 Lamc3Q9R0B6 1581 aa7.59□□□□□ -1.19
Cd44-202ENSMUST00000060516 Arhgef11Q68FM7 1552 aa7.57□□□□□ -1.2
Cd44-202ENSMUST00000060516 Ccdc136Q3TVA9 1136 aa7.57□□□□□ -1.2
Cd44-202ENSMUST00000060516 CftrP26361 1476 aa7.56□□□□□ -1.2
Cd44-202ENSMUST00000060516 PtprtQ99M80 1454 aa7.55□□□□□ -1.2
Cd44-202ENSMUST00000060516 Urb2E9Q7L1 1524 aaKnown RBP7.55□□□□□ -1.2
Cd44-202ENSMUST00000060516 Gpatch8A2A6A1 1505 aa7.54□□□□□ -1.2
Cd44-202ENSMUST00000060516 Cypt1Q8CH20 168 aa7.53□□□□□ -1.2
Cd44-202ENSMUST00000060516 PtprkP35822 1457 aa7.53□□□□□ -1.2
Cd44-202ENSMUST00000060516 Brd4Q9ESU6 1400 aaKnown RBP7.53□□□□□ -1.2
Cd44-202ENSMUST00000060516 Cep170Q6A065 1588 aa7.51□□□□□ -1.21
Cd44-202ENSMUST00000060516 Cc2d2bA0A286YDU8 1405 aa7.51□□□□□ -1.21
Cd44-202ENSMUST00000060516 Crocc2F6XLV1 1638 aa7.5□□□□□ -1.21
Cd44-202ENSMUST00000060516 Kif15Q6P9L6 1387 aa7.47□□□□□ -1.21
Cd44-202ENSMUST00000060516 Plekhg3Q4VAC9 1341 aa7.47□□□□□ -1.21
Cd44-202ENSMUST00000060516 EprsQ8CGC7 1512 aaKnown RBP7.47□□□□□ -1.21
Cd44-202ENSMUST00000060516 Npm1Q61937 292 aaKnown RBP7.46□□□□□ -1.21
Cd44-202ENSMUST00000060516 Ccdc18Q640L5 1455 aa7.45□□□□□ -1.22
Cd44-202ENSMUST00000060516 Pcdh10E9PXQ7 1057 aa7.44□□□□□ -1.22
Cd44-202ENSMUST00000060516 Golga3P55937 1487 aa7.44□□□□□ -1.22
Cd44-202ENSMUST00000060516 Gapvd1Q6PAR5 1458 aa7.44□□□□□ -1.22
Cd44-202ENSMUST00000060516 AdgbG3UZ78 1657 aa7.44□□□□□ -1.22
Cd44-202ENSMUST00000060516 NefmP08553 848 aa7.43□□□□□ -1.22
Cd44-202ENSMUST00000060516 Anks4bQ8K3X6 423 aa7.43□□□□□ -1.22
Cd44-202ENSMUST00000060516 Setbp1Q9Z180 1582 aa7.43□□□□□ -1.22
Cd44-202ENSMUST00000060516 Las1lA2BE28 776 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 201.4 ms