RNA–Protein interactions for RNA: ENSMUST00000053766.13

Amfr-201, Transcript of E3 ubiquitin-protein ligase AMFR, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Amfr, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Amfr-201ENSMUST00000053766 Rhox8Q6VSS7 320 aa30.38■■■□□ 2.45
Amfr-201ENSMUST00000053766 NischQ80TM9 1593 aa29.62■■■□□ 2.33
Amfr-201ENSMUST00000053766 Ehmt2Q9Z148 1263 aaKnown RBP29.28■■■□□ 2.28
Amfr-201ENSMUST00000053766 Rpgrip1Q9EPQ2 1331 aa28.68■■■□□ 2.18
Amfr-201ENSMUST00000053766 Abcc9P70170 1546 aa28.21■■■□□ 2.11
Amfr-201ENSMUST00000053766 Ccdc136Q3TVA9 1136 aa27.91■■■□□ 2.06
Amfr-201ENSMUST00000053766 Acin1Q9JIX8 1338 aaKnown RBP27.84■■■□□ 2.05
Amfr-201ENSMUST00000053766 Abcc8B2RUS7 1588 aa27.66■■■□□ 2.02
Amfr-201ENSMUST00000053766 Pcgf6Q99NA9 353 aa27.66■■■□□ 2.02
Amfr-201ENSMUST00000053766 Zeb1Q64318 1117 aa27.51■■■□□ 2
Amfr-201ENSMUST00000053766 Gm35339A0A140LHH9 1649 aa27.35■■□□□ 1.97
Amfr-201ENSMUST00000053766 Supt5hO55201 1082 aaKnown RBP27.13■■□□□ 1.93
Amfr-201ENSMUST00000053766 Trim41Q5NCC3 630 aa27.03■■□□□ 1.92
Amfr-201ENSMUST00000053766 Gab3Q8BSM5 595 aa27■■□□□ 1.91
Amfr-201ENSMUST00000053766 Las1lA2BE28 776 aaKnown RBP26.94■■□□□ 1.9
Amfr-201ENSMUST00000053766 Wdr66E9Q743 1299 aa26.91■■□□□ 1.9
Amfr-201ENSMUST00000053766 Ccdc180J3QNE4 1664 aa26.9■■□□□ 1.9
Amfr-201ENSMUST00000053766 Cngb1E1AZ71 1325 aa26.79■■□□□ 1.88
Amfr-201ENSMUST00000053766 Rtl1Q7M732 1744 aa26.72■■□□□ 1.87
Amfr-201ENSMUST00000053766 Neurod1Q60867 357 aa26.64■■□□□ 1.85
Amfr-201ENSMUST00000053766 Ppargc1bQ8VHJ7 1014 aa26.6■■□□□ 1.85
Amfr-201ENSMUST00000053766 HrcG5E8J6 738 aa26.5■■□□□ 1.83
Amfr-201ENSMUST00000053766 Esf1Q3V1V3 845 aaKnown RBP26.4■■□□□ 1.82
Amfr-201ENSMUST00000053766 Zcchc6Q5BLK4 1491 aaKnown RBP26.33■■□□□ 1.81
Amfr-201ENSMUST00000053766 UbtfP25976 765 aaKnown RBP26.19■■□□□ 1.78
Amfr-201ENSMUST00000053766 Gm38655A0A286YDK6 273 aa26.14■■□□□ 1.78
Amfr-201ENSMUST00000053766 NefmP08553 848 aa26.12■■□□□ 1.77
Amfr-201ENSMUST00000053766 Csrnp3P59055 597 aa26.07■■□□□ 1.76
Amfr-201ENSMUST00000053766 CenpbP27790 599 aa26.05■■□□□ 1.76
Amfr-201ENSMUST00000053766 Sall2Q9QX96 1004 aa26.04■■□□□ 1.76
Amfr-201ENSMUST00000053766 Rb1cc1Q9ESK9 1588 aa25.98■■□□□ 1.75
Amfr-201ENSMUST00000053766 Mier1Q5UAK0 511 aa25.97■■□□□ 1.75
Amfr-201ENSMUST00000053766 Cdk11bP24788 784 aaKnown RBP25.95■■□□□ 1.75
Amfr-201ENSMUST00000053766 Myt1lP97500 1187 aa25.94■■□□□ 1.74
Amfr-201ENSMUST00000053766 Dcaf1Q80TR8 1506 aa25.88■■□□□ 1.73
Amfr-201ENSMUST00000053766 Nop58Q6DFW4 536 aaKnown RBP25.88■■□□□ 1.73
Amfr-201ENSMUST00000053766 1700123L14RikQ3V2K7 440 aa25.8■■□□□ 1.72
Amfr-201ENSMUST00000053766 Chic1Q8CBW7 227 aa25.74■■□□□ 1.71
Amfr-201ENSMUST00000053766 Npm2Q80W85 207 aa25.62■■□□□ 1.69
Amfr-201ENSMUST00000053766 Anks4bQ8K3X6 423 aa25.55■■□□□ 1.68
Amfr-201ENSMUST00000053766 Kdm5dQ62240 1548 aa25.49■■□□□ 1.67
Amfr-201ENSMUST00000053766 Baz1aO88379 1555 aa25.44■■□□□ 1.66
Amfr-201ENSMUST00000053766 Slc24a1Q91WD8 1130 aa25.43■■□□□ 1.66
Amfr-201ENSMUST00000053766 ScribQ80U72 1612 aa25.4■■□□□ 1.66
Amfr-201ENSMUST00000053766 Aebp2Q9Z248 504 aaKnown RBP25.38■■□□□ 1.65
Amfr-201ENSMUST00000053766 Mapk8ip2Q9ERE9 830 aa25.33■■□□□ 1.65
Amfr-201ENSMUST00000053766 NacadQ5SWP3 1504 aa25.31■■□□□ 1.64
Amfr-201ENSMUST00000053766 Cep164Q5DU05 1446 aa25.29■■□□□ 1.64
Amfr-201ENSMUST00000053766 Il27Q8K3I6 234 aa25.28■■□□□ 1.64
Amfr-201ENSMUST00000053766 Ttbk1Q6PCN3 1308 aa25.25■■□□□ 1.63
Amfr-201ENSMUST00000053766 DiexfQ8BTT6 772 aaKnown RBP25.24■■□□□ 1.63
Amfr-201ENSMUST00000053766 Myt1Q8CFC2 1127 aa25.21■■□□□ 1.63
Amfr-201ENSMUST00000053766 ClspnQ80YR7 1315 aa25.18■■□□□ 1.62
Amfr-201ENSMUST00000053766 TonslQ6NZL6 1363 aa25.18■■□□□ 1.62
Amfr-201ENSMUST00000053766 Ube2uB1AUC4 352 aa25.15■■□□□ 1.62
Amfr-201ENSMUST00000053766 Aplp2Q06335 707 aa25.13■■□□□ 1.61
Amfr-201ENSMUST00000053766 Ap3b1Q9Z1T1 1105 aa25.12■■□□□ 1.61
Amfr-201ENSMUST00000053766 Eid3Q3V124 375 aa25.07■■□□□ 1.6
Amfr-201ENSMUST00000053766 Rsf1E9PWW9 1441 aaKnown RBP25.07■■□□□ 1.6
Amfr-201ENSMUST00000053766 Brd4Q9ESU6 1400 aaKnown RBP25.04■■□□□ 1.6
Amfr-201ENSMUST00000053766 Plekhg3Q4VAC9 1341 aa25■■□□□ 1.59
Amfr-201ENSMUST00000053766 Pelp1Q9DBD5 1123 aaKnown RBP24.94■■□□□ 1.58
Amfr-201ENSMUST00000053766 SafbD3YXK2 937 aaKnown RBP24.89■■□□□ 1.58
Amfr-201ENSMUST00000053766 Fam71e1A1L3C1 212 aa24.89■■□□□ 1.57
Amfr-201ENSMUST00000053766 Eif5bQ05D44 1216 aaKnown RBP24.87■■□□□ 1.57
Amfr-201ENSMUST00000053766 Ccdc88bQ4QRL3 1481 aa24.86■■□□□ 1.57
Amfr-201ENSMUST00000053766 NclP09405 707 aaKnown RBP24.82■■□□□ 1.56
Amfr-201ENSMUST00000053766 Tnnt3Q9QZ47 272 aa24.79■■□□□ 1.56
Amfr-201ENSMUST00000053766 Amer1Q7TS75 1132 aa24.76■■□□□ 1.55
Amfr-201ENSMUST00000053766 Fam50aQ9WV03 339 aaKnown RBP24.76■■□□□ 1.55
Amfr-201ENSMUST00000053766 Cecr2E9Q2Z1 1453 aa24.75■■□□□ 1.55
Amfr-201ENSMUST00000053766 Golga3P55937 1487 aa24.72■■□□□ 1.55
Amfr-201ENSMUST00000053766 Hnrnpul2Q00PI9 745 aaKnown RBP24.68■■□□□ 1.54
Amfr-201ENSMUST00000053766 Stra8P70278 393 aa24.64■■□□□ 1.54
Amfr-201ENSMUST00000053766 Smarca2Q6DIC0 1577 aa24.62■■□□□ 1.53
Amfr-201ENSMUST00000053766 Sycp2Q9CUU3 1500 aa24.6■■□□□ 1.53
Amfr-201ENSMUST00000053766 Bcl11aQ9QYE3 773 aa24.58■■□□□ 1.52
Amfr-201ENSMUST00000053766 Anp32aO35381 247 aa24.52■■□□□ 1.52
Amfr-201ENSMUST00000053766 Lmod2Q3UHZ5 550 aa24.48■■□□□ 1.51
Amfr-201ENSMUST00000053766 Clip1Q922J3 1391 aa24.44■■□□□ 1.5
Amfr-201ENSMUST00000053766 Crybg2B7ZCC2 1516 aa24.36■■□□□ 1.49
Amfr-201ENSMUST00000053766 Synj1Q8CHC4 1574 aa24.33■■□□□ 1.48
Amfr-201ENSMUST00000053766 Calr4Q3TQS0 420 aa24.29■■□□□ 1.48
Amfr-201ENSMUST00000053766 Ppp4r2Q0VGB7 417 aa24.28■■□□□ 1.48
Amfr-201ENSMUST00000053766 CftrP26361 1476 aa24.26■■□□□ 1.47
Amfr-201ENSMUST00000053766 4933416C03RikQ3V063 378 aa24.23■■□□□ 1.47
Amfr-201ENSMUST00000053766 NrdcQ8BHG1 1161 aa24.2■■□□□ 1.46
Amfr-201ENSMUST00000053766 Ifnlr1Q8CGK5 535 aa24.15■■□□□ 1.46
Amfr-201ENSMUST00000053766 P3h3Q8CG70 732 aa24.13■■□□□ 1.45
Amfr-201ENSMUST00000053766 Npm1Q61937 292 aaKnown RBP24.1■■□□□ 1.45
Amfr-201ENSMUST00000053766 PrkcshO08795 521 aa24.05■■□□□ 1.44
Amfr-201ENSMUST00000053766 Rtl5Q5DTT4 599 aa24.02■■□□□ 1.44
Amfr-201ENSMUST00000053766 Cep162Q6ZQ06 1403 aa24■■□□□ 1.43
Amfr-201ENSMUST00000053766 Rapgef2Q8CHG7 1496 aa23.95■■□□□ 1.42
Amfr-201ENSMUST00000053766 Wdr43Q6ZQL4 677 aaKnown RBP23.94■■□□□ 1.42
Amfr-201ENSMUST00000053766 Setd5Q5XJV7 1441 aa23.93■■□□□ 1.42
Amfr-201ENSMUST00000053766 DaxxO35613 739 aa23.93■■□□□ 1.42
Amfr-201ENSMUST00000053766 Kif15Q6P9L6 1387 aa23.93■■□□□ 1.42
Amfr-201ENSMUST00000053766 Nolc1E9Q5C9 702 aaKnown RBP23.9■■□□□ 1.42
Amfr-201ENSMUST00000053766 Ubl4bQ9CQ84 188 aa23.88■■□□□ 1.41
Retrieved 100 of 22,080 RNA–protein pairs in 6.9 ms