RNA–Protein interactions for RNA: ENSMUST00000050029.7

Six1-201, Transcript of Homeobox protein SIX1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Six1, Length 3,316 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six1-201ENSMUST00000050029 NischQ80TM9 1593 aa28.07■■■□□ 2.08
Six1-201ENSMUST00000050029 Gm35339A0A140LHH9 1649 aa27.22■■□□□ 1.95
Six1-201ENSMUST00000050029 Abcc9P70170 1546 aa26.99■■□□□ 1.91
Six1-201ENSMUST00000050029 Abcc8B2RUS7 1588 aa26.68■■□□□ 1.86
Six1-201ENSMUST00000050029 Rhox8Q6VSS7 320 aa26.42■■□□□ 1.82
Six1-201ENSMUST00000050029 DiexfQ8BTT6 772 aaKnown RBP25.49■■□□□ 1.67
Six1-201ENSMUST00000050029 ScribQ80U72 1612 aa25.15■■□□□ 1.62
Six1-201ENSMUST00000050029 Pcgf6Q99NA9 353 aa24.83■■□□□ 1.57
Six1-201ENSMUST00000050029 Amer1Q7TS75 1132 aa24.76■■□□□ 1.55
Six1-201ENSMUST00000050029 Myt1Q8CFC2 1127 aa24.69■■□□□ 1.54
Six1-201ENSMUST00000050029 Kdm5dQ62240 1548 aa24.67■■□□□ 1.54
Six1-201ENSMUST00000050029 Ccdc136Q3TVA9 1136 aa24.62■■□□□ 1.53
Six1-201ENSMUST00000050029 Rpgrip1Q9EPQ2 1331 aa24.59■■□□□ 1.53
Six1-201ENSMUST00000050029 Rb1cc1Q9ESK9 1588 aa24.54■■□□□ 1.52
Six1-201ENSMUST00000050029 Bcl11aQ9QYE3 773 aa24.48■■□□□ 1.51
Six1-201ENSMUST00000050029 CenpbP27790 599 aa24.48■■□□□ 1.51
Six1-201ENSMUST00000050029 NacadQ5SWP3 1504 aa24.44■■□□□ 1.5
Six1-201ENSMUST00000050029 Dcaf1Q80TR8 1506 aa24.38■■□□□ 1.49
Six1-201ENSMUST00000050029 Zcchc6Q5BLK4 1491 aaKnown RBP24.23■■□□□ 1.47
Six1-201ENSMUST00000050029 Plppr3Q7TPB0 716 aa24.13■■□□□ 1.45
Six1-201ENSMUST00000050029 Baz1aO88379 1555 aa24.1■■□□□ 1.45
Six1-201ENSMUST00000050029 Ttbk1Q6PCN3 1308 aa24.08■■□□□ 1.45
Six1-201ENSMUST00000050029 Rtl1Q7M732 1744 aa24.07■■□□□ 1.44
Six1-201ENSMUST00000050029 PrkcshO08795 521 aa24.04■■□□□ 1.44
Six1-201ENSMUST00000050029 Las1lA2BE28 776 aaKnown RBP23.95■■□□□ 1.42
Six1-201ENSMUST00000050029 Sycp2Q9CUU3 1500 aa23.93■■□□□ 1.42
Six1-201ENSMUST00000050029 CatipB9EKE5 520 aa23.82■■□□□ 1.4
Six1-201ENSMUST00000050029 Ccdc180J3QNE4 1664 aa23.81■■□□□ 1.4
Six1-201ENSMUST00000050029 Trim41Q5NCC3 630 aa23.62■■□□□ 1.37
Six1-201ENSMUST00000050029 Ube2uB1AUC4 352 aa23.61■■□□□ 1.37
Six1-201ENSMUST00000050029 Cngb1E1AZ71 1325 aa23.52■■□□□ 1.36
Six1-201ENSMUST00000050029 BicraF8VPZ9 1578 aa23.51■■□□□ 1.35
Six1-201ENSMUST00000050029 Cecr2E9Q2Z1 1453 aa23.48■■□□□ 1.35
Six1-201ENSMUST00000050029 Crybg2B7ZCC2 1516 aa23.47■■□□□ 1.35
Six1-201ENSMUST00000050029 Smarca2Q6DIC0 1577 aa23.46■■□□□ 1.35
Six1-201ENSMUST00000050029 Esf1Q3V1V3 845 aaKnown RBP23.43■■□□□ 1.34
Six1-201ENSMUST00000050029 1700123L14RikQ3V2K7 440 aa23.39■■□□□ 1.34
Six1-201ENSMUST00000050029 Neurod1Q60867 357 aa23.25■■□□□ 1.31
Six1-201ENSMUST00000050029 Ehmt2Q9Z148 1263 aaKnown RBP23.2■■□□□ 1.3
Six1-201ENSMUST00000050029 Gab3Q8BSM5 595 aa23.13■■□□□ 1.29
Six1-201ENSMUST00000050029 Brd4Q9ESU6 1400 aaKnown RBP23.1■■□□□ 1.29
Six1-201ENSMUST00000050029 HrcG5E8J6 738 aa23.1■■□□□ 1.29
Six1-201ENSMUST00000050029 Chic1Q8CBW7 227 aa23.05■■□□□ 1.28
Six1-201ENSMUST00000050029 Pknox2Q8BG99 474 aa23■■□□□ 1.27
Six1-201ENSMUST00000050029 Synj1Q8CHC4 1574 aa23■■□□□ 1.27
Six1-201ENSMUST00000050029 Gm38655A0A286YDK6 273 aa22.95■■□□□ 1.26
Six1-201ENSMUST00000050029 CftrP26361 1476 aa22.88■■□□□ 1.25
Six1-201ENSMUST00000050029 Gtf3c5Q8R2T8 520 aa22.88■■□□□ 1.25
Six1-201ENSMUST00000050029 Acin1Q9JIX8 1338 aaKnown RBP22.81■■□□□ 1.24
Six1-201ENSMUST00000050029 Smarca4Q3TKT4 1613 aaKnown RBP22.79■■□□□ 1.24
Six1-201ENSMUST00000050029 Ifnlr1Q8CGK5 535 aa22.77■■□□□ 1.23
Six1-201ENSMUST00000050029 Rsf1E9PWW9 1441 aaKnown RBP22.74■■□□□ 1.23
Six1-201ENSMUST00000050029 ArxO35085 564 aa22.72■■□□□ 1.23
Six1-201ENSMUST00000050029 Golga3P55937 1487 aa22.71■■□□□ 1.23
Six1-201ENSMUST00000050029 Ccdc88bQ4QRL3 1481 aa22.71■■□□□ 1.23
Six1-201ENSMUST00000050029 Il27Q8K3I6 234 aa22.62■■□□□ 1.21
Six1-201ENSMUST00000050029 Pds5bQ4VA53 1446 aaKnown RBP22.62■■□□□ 1.21
Six1-201ENSMUST00000050029 Iqgap2Q3UQ44 1575 aa22.62■■□□□ 1.21
Six1-201ENSMUST00000050029 Atad2bE9Q166 1460 aaKnown RBP22.61■■□□□ 1.21
Six1-201ENSMUST00000050029 BccipQ9CWI3 316 aa22.6■■□□□ 1.21
Six1-201ENSMUST00000050029 Csrnp3P59055 597 aa22.59■■□□□ 1.21
Six1-201ENSMUST00000050029 Cttnbp2B9EJA2 1648 aa22.57■■□□□ 1.2
Six1-201ENSMUST00000050029 Fgd1P52734 960 aa22.56■■□□□ 1.2
Six1-201ENSMUST00000050029 Cep164Q5DU05 1446 aa22.54■■□□□ 1.2
Six1-201ENSMUST00000050029 NrdcQ8BHG1 1161 aa22.5■■□□□ 1.19
Six1-201ENSMUST00000050029 Aplp2Q06335 707 aa22.48■■□□□ 1.19
Six1-201ENSMUST00000050029 Eif5bQ05D44 1216 aaKnown RBP22.43■■□□□ 1.18
Six1-201ENSMUST00000050029 Myt1lP97500 1187 aa22.42■■□□□ 1.18
Six1-201ENSMUST00000050029 TimelessQ9R1X4 1197 aa22.4■■□□□ 1.18
Six1-201ENSMUST00000050029 Anks4bQ8K3X6 423 aa22.37■■□□□ 1.17
Six1-201ENSMUST00000050029 Npm2Q80W85 207 aa22.36■■□□□ 1.17
Six1-201ENSMUST00000050029 Supt5hO55201 1082 aaKnown RBP22.35■■□□□ 1.17
Six1-201ENSMUST00000050029 Cc2d2aQ8CFW7 1633 aa22.33■■□□□ 1.17
Six1-201ENSMUST00000050029 Frmpd1A2AKB4 1549 aa22.32■■□□□ 1.16
Six1-201ENSMUST00000050029 Ercc6F8VPZ5 1481 aa22.3■■□□□ 1.16
Six1-201ENSMUST00000050029 Ubl4bQ9CQ84 188 aa22.29■■□□□ 1.16
Six1-201ENSMUST00000050029 Dnajc5bQ9CQ94 199 aa22.29■■□□□ 1.16
Six1-201ENSMUST00000050029 Top2bQ64511 1612 aa22.24■■□□□ 1.15
Six1-201ENSMUST00000050029 Hdac5Q9Z2V6 1113 aa22.23■■□□□ 1.15
Six1-201ENSMUST00000050029 Kif15Q6P9L6 1387 aa22.22■■□□□ 1.15
Six1-201ENSMUST00000050029 Wdr62Q3U3T8 1523 aa22.16■■□□□ 1.14
Six1-201ENSMUST00000050029 Zeb1Q64318 1117 aa22.12■■□□□ 1.13
Six1-201ENSMUST00000050029 Fmn1Q05860 1466 aa22.11■■□□□ 1.13
Six1-201ENSMUST00000050029 Scaf1Q5U4C3 1256 aaKnown RBP22.05■■□□□ 1.12
Six1-201ENSMUST00000050029 Znf316Q6PGE4 1016 aa22.03■■□□□ 1.12
Six1-201ENSMUST00000050029 Rsph4aQ8BYM7 716 aa22.03■■□□□ 1.12
Six1-201ENSMUST00000050029 Npm1Q61937 292 aaKnown RBP22.02■■□□□ 1.12
Six1-201ENSMUST00000050029 Phldb1Q6PDH0 1371 aaKnown RBP21.97■■□□□ 1.11
Six1-201ENSMUST00000050029 Ap3b1Q9Z1T1 1105 aa21.91■■□□□ 1.1
Six1-201ENSMUST00000050029 Zfp777B9EKF4 885 aa21.88■■□□□ 1.09
Six1-201ENSMUST00000050029 Rapgef2Q8CHG7 1496 aa21.88■■□□□ 1.09
Six1-201ENSMUST00000050029 Cux2P70298 1426 aa21.88■■□□□ 1.09
Six1-201ENSMUST00000050029 UbtfP25976 765 aaKnown RBP21.86■■□□□ 1.09
Six1-201ENSMUST00000050029 Top2aQ01320 1528 aaKnown RBP21.86■■□□□ 1.09
Six1-201ENSMUST00000050029 Thoc2B1AZI6 1594 aaKnown RBP21.84■■□□□ 1.09
Six1-201ENSMUST00000050029 Unc13aQ4KUS2 1712 aa21.84■■□□□ 1.09
Six1-201ENSMUST00000050029 Cdk11bP24788 784 aaKnown RBP21.79■■□□□ 1.08
Six1-201ENSMUST00000050029 PtprkP35822 1457 aa21.78■■□□□ 1.08
Six1-201ENSMUST00000050029 Fam71e1A1L3C1 212 aa21.77■■□□□ 1.08
Six1-201ENSMUST00000050029 Cep162Q6ZQ06 1403 aa21.76■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms